RNA–Protein interactions for RNA: ENST00000566108.2

TNRC6A-211, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 3

Gene TNRC6A, Length 454 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-211ENST00000566108 UTP14AQ9BVJ6 771 aaKnown RBP16.79■□□□□ 0.28
TNRC6A-211ENST00000566108 CHMP4AQ9BY43 222 aa16.79■□□□□ 0.28
TNRC6A-211ENST00000566108 RIC1Q4ADV7 1423 aa16.79■□□□□ 0.28
TNRC6A-211ENST00000566108 FKBP4Q02790 459 aaKnown RBP eCLIP16.78■□□□□ 0.28
TNRC6A-211ENST00000566108 GRIPAP1Q4V328 841 aa16.78■□□□□ 0.28
TNRC6A-211ENST00000566108 ZNF34Q8IZ26 560 aa16.78■□□□□ 0.28
TNRC6A-211ENST00000566108 CFAP44Q96MT7 982 aa16.78■□□□□ 0.28
TNRC6A-211ENST00000566108 DDX21Q9NR30 783 aaKnown RBP eCLIP16.78■□□□□ 0.28
TNRC6A-211ENST00000566108 TRIM35Q9UPQ4 493 aa16.78■□□□□ 0.28
TNRC6A-211ENST00000566108 UBN2Q6ZU65 1347 aa16.77■□□□□ 0.28
TNRC6A-211ENST00000566108 CRY2Q49AN0 593 aa16.77■□□□□ 0.28
TNRC6A-211ENST00000566108 SUSD4Q5VX71 490 aa16.77■□□□□ 0.28
TNRC6A-211ENST00000566108 COPS6Q7L5N1 327 aa16.77■□□□□ 0.28
TNRC6A-211ENST00000566108 NLRP3Q96P20 1036 aa16.77■□□□□ 0.28
TNRC6A-211ENST00000566108 ANKRD36CQ5JPF3 1778 aa16.77■□□□□ 0.27
TNRC6A-211ENST00000566108 ABCC12Q96J65 1359 aa16.77■□□□□ 0.27
TNRC6A-211ENST00000566108 ANXA1P04083 346 aa16.76■□□□□ 0.27
TNRC6A-211ENST00000566108 PRELPP51888 382 aa16.76■□□□□ 0.27
TNRC6A-211ENST00000566108 GNAI1P63096 354 aa16.76■□□□□ 0.27
TNRC6A-211ENST00000566108 PDIA6Q15084 440 aa16.76■□□□□ 0.27
TNRC6A-211ENST00000566108 XAGE3Q8WTP9 111 aa16.76■□□□□ 0.27
TNRC6A-211ENST00000566108 DBF4Q9UBU7 674 aaPredicted RBP16.76■□□□□ 0.27
TNRC6A-211ENST00000566108 IQCA1LA6NCM1 817 aa16.75■□□□□ 0.27
TNRC6A-211ENST00000566108 APAF1O14727 1248 aa16.75■□□□□ 0.27
TNRC6A-211ENST00000566108 NTSR2O95665 410 aa16.75■□□□□ 0.27
TNRC6A-211ENST00000566108 PROSER3Q2NL68 480 aa16.75■□□□□ 0.27
TNRC6A-211ENST00000566108 C7orf43Q8WVR3 580 aa16.75■□□□□ 0.27
TNRC6A-211ENST00000566108 JDP2Q8WYK2 163 aa16.75■□□□□ 0.27
TNRC6A-211ENST00000566108 IFT57Q9NWB7 429 aa16.75■□□□□ 0.27
TNRC6A-211ENST00000566108 HYPKQ9NX55 129 aa16.75■□□□□ 0.27
TNRC6A-211ENST00000566108 CHPF2Q9P2E5 772 aa16.75■□□□□ 0.27
TNRC6A-211ENST00000566108 WDR90Q96KV7 1748 aa16.75■□□□□ 0.27
TNRC6A-211ENST00000566108 MYCNP04198 464 aaPredicted RBP16.74■□□□□ 0.27
TNRC6A-211ENST00000566108 HOXA10P31260 410 aaPredicted RBP16.74■□□□□ 0.27
TNRC6A-211ENST00000566108 CRAMP1Q96RY5 1269 aa16.74■□□□□ 0.27
TNRC6A-211ENST00000566108 ZNF277Q9NRM2 450 aaPredicted RBP16.74■□□□□ 0.27
TNRC6A-211ENST00000566108 PPEF1O14829 653 aaPredicted RBP16.73■□□□□ 0.27
TNRC6A-211ENST00000566108 IARSP41252 1262 aaKnown RBP16.73■□□□□ 0.27
TNRC6A-211ENST00000566108 DUSP27Q5VZP5 1158 aa16.73■□□□□ 0.27
TNRC6A-211ENST00000566108 PSMD1Q99460 953 aa16.73■□□□□ 0.27
TNRC6A-211ENST00000566108 TRMT112Q9UI30 125 aaKnown RBP16.73■□□□□ 0.27
TNRC6A-211ENST00000566108 CEP350Q5VT06 3117 aa16.72■□□□□ 0.27
TNRC6A-211ENST00000566108 ANP32CO43423 234 aa16.72■□□□□ 0.27
TNRC6A-211ENST00000566108 TCIRG1Q13488 830 aa16.72■□□□□ 0.27
TNRC6A-211ENST00000566108 LRP10Q7Z4F1 713 aa16.72■□□□□ 0.27
TNRC6A-211ENST00000566108 SYNE4Q8N205 404 aa16.72■□□□□ 0.27
TNRC6A-211ENST00000566108 MBIPQ9NS73 344 aa16.72■□□□□ 0.27
TNRC6A-211ENST00000566108 SH3TC1Q8TE82 1336 aa16.71■□□□□ 0.27
TNRC6A-211ENST00000566108 GOLGA2Q08379 1002 aa16.71■□□□□ 0.27
TNRC6A-211ENST00000566108 KRT24Q2M2I5 525 aa16.71■□□□□ 0.27
TNRC6A-211ENST00000566108 ANKRD13DQ6ZTN6 518 aa16.71■□□□□ 0.27
TNRC6A-211ENST00000566108 NLRP10Q86W26 655 aa16.71■□□□□ 0.27
TNRC6A-211ENST00000566108 PLBD2Q8NHP8 589 aa16.71■□□□□ 0.27
TNRC6A-211ENST00000566108 U3KPZ7 1027 aaPredicted RBP16.71■□□□□ 0.27
TNRC6A-211ENST00000566108 DDNO94850 711 aaPredicted RBP16.7■□□□□ 0.26
TNRC6A-211ENST00000566108 HSP90B1P14625 803 aaKnown RBP16.7■□□□□ 0.26
TNRC6A-211ENST00000566108 EIF6P56537 245 aaKnown RBP16.7■□□□□ 0.26
TNRC6A-211ENST00000566108 SLC10A5Q5PT55 438 aa16.7■□□□□ 0.26
TNRC6A-211ENST00000566108 DDX46Q7L014 1031 aaKnown RBP16.7■□□□□ 0.26
TNRC6A-211ENST00000566108 SCN4AP35499 1836 aa16.7■□□□□ 0.26
TNRC6A-211ENST00000566108 ZNF316A6NFI3 1004 aaPredicted RBP16.69■□□□□ 0.26
TNRC6A-211ENST00000566108 TCERG1O14776 1098 aaKnown RBP16.69■□□□□ 0.26
TNRC6A-211ENST00000566108 OLFM4Q6UX06 510 aa16.69■□□□□ 0.26
TNRC6A-211ENST00000566108 LARGE2Q8N3Y3 721 aa16.69■□□□□ 0.26
TNRC6A-211ENST00000566108 SUPT20HQ8NEM7 779 aa16.69■□□□□ 0.26
TNRC6A-211ENST00000566108 BBOX1O75936 387 aa16.68■□□□□ 0.26
TNRC6A-211ENST00000566108 RIC3Q7Z5B4 369 aa16.68■□□□□ 0.26
TNRC6A-211ENST00000566108 DDX58O95786 925 aaKnown RBP16.67■□□□□ 0.26
TNRC6A-211ENST00000566108 ZNF853P0CG23 659 aa16.67■□□□□ 0.26
TNRC6A-211ENST00000566108 HCLS1P14317 486 aaPredicted RBP16.67■□□□□ 0.26
TNRC6A-211ENST00000566108 LMOD1P29536 600 aaPredicted RBP16.67■□□□□ 0.26
TNRC6A-211ENST00000566108 CCDC30Q5VVM6 783 aa16.67■□□□□ 0.26
TNRC6A-211ENST00000566108 CHADLQ6NUI6 762 aa16.67■□□□□ 0.26
TNRC6A-211ENST00000566108 TMC4Q7Z404 712 aa16.67■□□□□ 0.26
TNRC6A-211ENST00000566108 L3MBTL3Q96JM7 780 aaPredicted RBP16.67■□□□□ 0.26
TNRC6A-211ENST00000566108 MRS2Q9HD23 443 aa16.67■□□□□ 0.26
TNRC6A-211ENST00000566108 HACL1Q9UJ83 578 aa16.67■□□□□ 0.26
TNRC6A-211ENST00000566108 NIM1KQ8IY84 436 aa16.66■□□□□ 0.26
TNRC6A-211ENST00000566108 GPC2Q8N158 579 aa16.66■□□□□ 0.26
TNRC6A-211ENST00000566108 ATP6V0A2Q9Y487 856 aa16.66■□□□□ 0.26
TNRC6A-211ENST00000566108 ABCC4O15439 1325 aa16.66■□□□□ 0.26
TNRC6A-211ENST00000566108 ELL2O00472 640 aaPredicted RBP16.65■□□□□ 0.26
TNRC6A-211ENST00000566108 PPIP5K2O43314 1243 aa16.65■□□□□ 0.26
TNRC6A-211ENST00000566108 EAPPQ56P03 285 aaPredicted RBP16.65■□□□□ 0.26
TNRC6A-211ENST00000566108 DPP8Q6V1X1 898 aaPredicted RBP16.65■□□□□ 0.26
TNRC6A-211ENST00000566108 PNMA8AQ86V59 439 aaPredicted RBP16.65■□□□□ 0.26
TNRC6A-211ENST00000566108 LDHDQ86WU2 507 aa16.65■□□□□ 0.26
TNRC6A-211ENST00000566108 KLRG1Q96E93 195 aa16.65■□□□□ 0.26
TNRC6A-211ENST00000566108 STK31Q9BXU1 1019 aa16.65■□□□□ 0.26
TNRC6A-211ENST00000566108 VPS33BQ9H267 617 aa16.65■□□□□ 0.26
TNRC6A-211ENST00000566108 CLEC11AQ9Y240 323 aa16.65■□□□□ 0.26
TNRC6A-211ENST00000566108 ZNF541Q9H0D2 1346 aa16.65■□□□□ 0.26
TNRC6A-211ENST00000566108 LAMB2P55268 1798 aa16.64■□□□□ 0.25
TNRC6A-211ENST00000566108 POTECB2RU33 542 aa16.64■□□□□ 0.25
TNRC6A-211ENST00000566108 FZD9O00144 591 aa16.64■□□□□ 0.25
TNRC6A-211ENST00000566108 GRAPQ13588 217 aa16.64■□□□□ 0.25
TNRC6A-211ENST00000566108 C3orf67Q6ZVT6 689 aa16.64■□□□□ 0.25
TNRC6A-211ENST00000566108 GRAPLQ8TC17 118 aaPredicted RBP16.64■□□□□ 0.25
TNRC6A-211ENST00000566108 RNF39Q9H2S5 420 aa16.64■□□□□ 0.25
TNRC6A-211ENST00000566108 GJA3Q9Y6H8 435 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms