RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 PPM1EQ8WY54 764 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 KCNB2Q92953 911 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 CFAP53Q96M91 514 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 OSBPL3Q9H4L5 887 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 IKQ13123 557 aaPredicted RBP3.4□□□□□ -1.87
CHD9-218ENST00000566029 ZRSR2Q15696 482 aaKnown RBP3.4□□□□□ -1.87
CHD9-218ENST00000566029 KCNV1Q6PIU1 500 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 ANKRD13AQ8IZ07 590 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 JMYQ8N9B5 988 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 CLIP2Q9UDT6 1046 aa3.4□□□□□ -1.87
CHD9-218ENST00000566029 CCDC196A0A1B0GTZ2 297 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 ANKRD33BA6NCL7 494 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 RTN2O75298 545 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 KCNJ6P48051 423 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 NEK4P51957 841 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 ZNF428Q96B54 188 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 SGSM3Q96HU1 749 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 SALL3Q9BXA9 1300 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 C9orf84Q5VXU9 1444 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 ATP10DQ9P241 1426 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 ERC2O15083 957 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 EPB41L2O43491 1005 aaKnown RBP3.39□□□□□ -1.87
CHD9-218ENST00000566029 MAP2K1Q02750 393 aaPredicted RBP3.39□□□□□ -1.87
CHD9-218ENST00000566029 INTS3Q68E01 1043 aaKnown RBP3.39□□□□□ -1.87
CHD9-218ENST00000566029 TMCO3Q6UWJ1 677 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 LRRC31Q6UY01 552 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 RPAP2Q8IXW5 612 aaPredicted RBP3.39□□□□□ -1.87
CHD9-218ENST00000566029 NT5C2P49902 561 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 VPS37DQ86XT2 251 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 SETD1BQ9UPS6 1966 aaKnown RBP3.39□□□□□ -1.87
CHD9-218ENST00000566029 CLCN6P51797 869 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 MAP3K11Q16584 847 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 ANO2Q9NQ90 1003 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 ZC3H13Q5T200 1668 aaKnown RBP3.39□□□□□ -1.87
CHD9-218ENST00000566029 LRCH2Q5VUJ6 765 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 FNTAP49354 379 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 PPP2R5AQ15172 486 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 ARHGAP29Q52LW3 1261 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.39□□□□□ -1.879e-7■■□□□ 12.9
CHD9-218ENST00000566029 ZCCHC17Q9NP64 241 aaKnown RBP3.39□□□□□ -1.87
CHD9-218ENST00000566029 LAMC1P11047 1609 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 CCDC192P0DO97 292 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 PAF1Q8N7H5 531 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 PLEKHF1Q96S99 279 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 MTMR6Q9Y217 621 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 FANCAO15360 1455 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 EIF3CLB5ME19 914 aaKnown RBP3.39□□□□□ -1.87
CHD9-218ENST00000566029 TEX35Q5T0J7 233 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 EFCAB13Q8IY85 973 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 EIF3CQ99613 913 aaKnown RBP3.39□□□□□ -1.87
CHD9-218ENST00000566029 XAGE2Q96GT9 111 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 PCMTD1Q96MG8 357 aaPredicted RBP3.39□□□□□ -1.87
CHD9-218ENST00000566029 API5Q9BZZ5 524 aaKnown RBP3.39□□□□□ -1.87
CHD9-218ENST00000566029 PHLPP2Q6ZVD8 1323 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 POLR3GO15318 223 aaPredicted RBP3.39□□□□□ -1.87
CHD9-218ENST00000566029 ST3GAL1Q11201 340 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 ARMCX6Q7L4S7 300 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 BORCS6Q96GS4 357 aa3.39□□□□□ -1.87
CHD9-218ENST00000566029 TTC21BQ7Z4L5 1316 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 FANCGO15287 622 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 SKILP12757 684 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 SF3A3Q12874 501 aaKnown RBP eCLIP3.38□□□□□ -1.87
CHD9-218ENST00000566029 IQCB1Q15051 598 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 ARGLU1Q9NWB6 273 aaPredicted RBP3.38□□□□□ -1.87
CHD9-218ENST00000566029 FAM135BQ49AJ0 1406 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 TLDC1Q6P9B6 456 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 TTC36A6NLP5 189 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 CAVIN2O95810 425 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 GNAI3P08754 354 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 FAM160A1Q05DH4 1040 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 PTPN14Q15678 1187 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 TTC14Q96N46 770 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 TTC41PQ6P2S7 1318 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 TOPBP1Q92547 1522 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 SNW1Q13573 536 aaKnown RBP3.38□□□□□ -1.87
CHD9-218ENST00000566029 ENOX2Q16206 610 aaKnown RBP3.38□□□□□ -1.87
CHD9-218ENST00000566029 CCDC158Q5M9N0 1113 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 TADA2BQ86TJ2 420 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 ESYT1Q9BSJ8 1104 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 NUP62CLQ9H1M0 184 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 STAP2Q9UGK3 403 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 MKRN1Q9UHC7 482 aaKnown RBP3.38□□□□□ -1.87
CHD9-218ENST00000566029 MCM8Q9UJA3 840 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 SART3Q15020 963 aaKnown RBP3.38□□□□□ -1.87
CHD9-218ENST00000566029 NBPF11Q86T75 865 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 METTL14Q9HCE5 456 aaKnown RBP3.38□□□□□ -1.87
CHD9-218ENST00000566029 TTC21AQ8NDW8 1320 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 PPFIA4O75335 1185 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 TPM1P09493 284 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 ETF1P62495 437 aaKnown RBP3.38□□□□□ -1.87
CHD9-218ENST00000566029 GPS2Q13227 327 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 MPP4Q96JB8 637 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 DNAI1Q9UI46 699 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 YTHDC2Q9H6S0 1430 aaKnown RBP3.38□□□□□ -1.87
CHD9-218ENST00000566029 NRXN1Q9ULB1 1477 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 IVLP07476 585 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 TRDNQ13061 729 aa3.38□□□□□ -1.87
CHD9-218ENST00000566029 FAM43BQ6ZT52 329 aaPredicted RBP3.38□□□□□ -1.87
CHD9-218ENST00000566029 SUDS3Q9H7L9 328 aaPredicted RBP3.38□□□□□ -1.87
CHD9-218ENST00000566029 STK26Q9P289 416 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms