RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 C9orf131Q5VYM1 1079 aa8.66□□□□□ -1.02
UBFD1-204ENST00000565634 ZNF787Q6DD87 383 aa8.66□□□□□ -1.02
UBFD1-204ENST00000565634 SMYD5Q6GMV2 418 aa8.66□□□□□ -1.02
UBFD1-204ENST00000565634 LTV1Q96GA3 475 aaPredicted RBP8.66□□□□□ -1.02
UBFD1-204ENST00000565634 SBF1O95248 1867 aa8.66□□□□□ -1.02
UBFD1-204ENST00000565634 KCPQ6ZWJ8 1503 aa8.65□□□□□ -1.02
UBFD1-204ENST00000565634 FOXN1O15353 648 aa8.65□□□□□ -1.02
UBFD1-204ENST00000565634 ZNF697Q5TEC3 545 aa8.65□□□□□ -1.02
UBFD1-204ENST00000565634 SPSB2Q99619 263 aa8.65□□□□□ -1.02
UBFD1-204ENST00000565634 MKRN1Q9UHC7 482 aaKnown RBP8.65□□□□□ -1.02
UBFD1-204ENST00000565634 TAF1LQ8IZX4 1826 aa8.65□□□□□ -1.02
UBFD1-204ENST00000565634 RGPD2P0DJD1 1756 aa8.65□□□□□ -1.02
UBFD1-204ENST00000565634 TRPM1Q7Z4N2 1603 aa8.65□□□□□ -1.03
UBFD1-204ENST00000565634 DOT1LQ8TEK3 1739 aa8.64□□□□□ -1.03
UBFD1-204ENST00000565634 GDF9O60383 454 aa8.64□□□□□ -1.03
UBFD1-204ENST00000565634 PRR20EP86478 221 aa8.64□□□□□ -1.03
UBFD1-204ENST00000565634 PRR20CP86479 221 aa8.64□□□□□ -1.03
UBFD1-204ENST00000565634 PRR20DP86480 221 aa8.64□□□□□ -1.03
UBFD1-204ENST00000565634 PRR20BP86481 221 aa8.64□□□□□ -1.03
UBFD1-204ENST00000565634 PRR20AP86496 221 aa8.64□□□□□ -1.03
UBFD1-204ENST00000565634 CPSF1Q10570 1443 aaKnown RBP8.63□□□□□ -1.03
UBFD1-204ENST00000565634 PIK3C2AO00443 1686 aa8.63□□□□□ -1.03
UBFD1-204ENST00000565634 FSTL1Q12841 308 aa8.63□□□□□ -1.03
UBFD1-204ENST00000565634 MORN1Q5T089 497 aa8.63□□□□□ -1.03
UBFD1-204ENST00000565634 THAP11Q96EK4 314 aa8.63□□□□□ -1.03
UBFD1-204ENST00000565634 SLIT3O75094 1523 aa8.63□□□□□ -1.03
UBFD1-204ENST00000565634 CCDC7Q96M83 1385 aa8.62□□□□□ -1.03
UBFD1-204ENST00000565634 CCDC85CA6NKD9 419 aa8.62□□□□□ -1.03
UBFD1-204ENST00000565634 DDX11L8A8MPP1 907 aa8.62□□□□□ -1.03
UBFD1-204ENST00000565634 TNFRSF10AO00220 468 aa8.62□□□□□ -1.03
UBFD1-204ENST00000565634 DGAT1O75907 488 aa8.62□□□□□ -1.03
UBFD1-204ENST00000565634 HSPA5P11021 654 aaKnown RBP8.62□□□□□ -1.03
UBFD1-204ENST00000565634 FUT2Q10981 343 aa8.62□□□□□ -1.03
UBFD1-204ENST00000565634 RDH13Q8NBN7 331 aa8.62□□□□□ -1.03
UBFD1-204ENST00000565634 CARD11Q9BXL7 1154 aa8.62□□□□□ -1.03
UBFD1-204ENST00000565634 LTN1O94822 1766 aa8.61□□□□□ -1.03
UBFD1-204ENST00000565634 ST20-MTHFSA0A0A6YYL1 179 aa8.61□□□□□ -1.03
UBFD1-204ENST00000565634 DPEP1P16444 411 aa8.61□□□□□ -1.03
UBFD1-204ENST00000565634 PKDCCQ504Y2 493 aa8.61□□□□□ -1.03
UBFD1-204ENST00000565634 FAM160A2Q8N612 972 aaPredicted RBP8.61□□□□□ -1.03
UBFD1-204ENST00000565634 ANKRD24Q8TF21 1146 aa8.61□□□□□ -1.03
UBFD1-204ENST00000565634 C5P01031 1676 aa8.61□□□□□ -1.03
UBFD1-204ENST00000565634 ROCK2O75116 1388 aaKnown RBP8.61□□□□□ -1.03
UBFD1-204ENST00000565634 KIAA1210Q9ULL0 1709 aa8.6□□□□□ -1.03
UBFD1-204ENST00000565634 UBR3Q6ZT12 1888 aa8.6□□□□□ -1.03
UBFD1-204ENST00000565634 GCGRP47871 477 aa8.6□□□□□ -1.03
UBFD1-204ENST00000565634 LBX1P52954 281 aa8.6□□□□□ -1.03
UBFD1-204ENST00000565634 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.6□□□□□ -1.03
UBFD1-204ENST00000565634 SMC1BQ8NDV3 1235 aa8.6□□□□□ -1.03
UBFD1-204ENST00000565634 ABHD8Q96I13 439 aa8.6□□□□□ -1.03
UBFD1-204ENST00000565634 PKD2L1Q9P0L9 805 aa8.6□□□□□ -1.03
UBFD1-204ENST00000565634 RNF181Q9P0P0 153 aa8.6□□□□□ -1.03
UBFD1-204ENST00000565634 SLC27A5Q9Y2P5 690 aa8.6□□□□□ -1.03
UBFD1-204ENST00000565634 KIAA1551Q9HCM1 1747 aa8.6□□□□□ -1.03
UBFD1-204ENST00000565634 NSD2O96028 1365 aa8.6□□□□□ -1.03
UBFD1-204ENST00000565634 ABCC6O95255 1503 aa8.59□□□□□ -1.03
UBFD1-204ENST00000565634 USP54Q70EL1 1684 aa8.59□□□□□ -1.03
UBFD1-204ENST00000565634 PDE4DIPQ5VU43 2346 aa8.59□□□□□ -1.03
UBFD1-204ENST00000565634 TTC21BQ7Z4L5 1316 aa8.59□□□□□ -1.03
UBFD1-204ENST00000565634 POTECB2RU33 542 aa8.59□□□□□ -1.03
UBFD1-204ENST00000565634 FBLN1P23142 703 aa8.59□□□□□ -1.03
UBFD1-204ENST00000565634 ATP6V1AP38606 617 aa8.59□□□□□ -1.03
UBFD1-204ENST00000565634 MLLT1Q03111 559 aaPredicted RBP8.59□□□□□ -1.03
UBFD1-204ENST00000565634 KCNH5Q8NCM2 988 aa8.59□□□□□ -1.03
UBFD1-204ENST00000565634 PKD1L3Q7Z443 1732 aa8.59□□□□□ -1.03
UBFD1-204ENST00000565634 TOGARAM1Q9Y4F4 1720 aa8.58□□□□□ -1.04
UBFD1-204ENST00000565634 MMP10P09238 476 aa8.58□□□□□ -1.04
UBFD1-204ENST00000565634 MPRIPQ6WCQ1 1025 aa8.58□□□□□ -1.04
UBFD1-204ENST00000565634 ZNF775Q96BV0 537 aaPredicted RBP8.58□□□□□ -1.04
UBFD1-204ENST00000565634 TESK2Q96S53 571 aa8.58□□□□□ -1.04
UBFD1-204ENST00000565634 CASP8AP2Q9UKL3 1982 aa8.58□□□□□ -1.04
UBFD1-204ENST00000565634 BRCA1P38398 1863 aaKnown RBP8.57□□□□□ -1.04
UBFD1-204ENST00000565634 FAM187AA6NFU0 413 aa8.57□□□□□ -1.04
UBFD1-204ENST00000565634 AK7Q96M32 723 aa8.57□□□□□ -1.04
UBFD1-204ENST00000565634 ANKRD36BQ8N2N9 1353 aa8.57□□□□□ -1.04
UBFD1-204ENST00000565634 USP47Q96K76 1375 aa8.57□□□□□ -1.04
UBFD1-204ENST00000565634 PXDNLA1KZ92 1463 aa8.57□□□□□ -1.04
UBFD1-204ENST00000565634 ITGB4P16144 1822 aa8.57□□□□□ -1.04
UBFD1-204ENST00000565634 KDM2BQ8NHM5 1336 aa8.56□□□□□ -1.04
UBFD1-204ENST00000565634 KCNA3P22001 575 aa8.56□□□□□ -1.04
UBFD1-204ENST00000565634 ZEB1P37275 1124 aaPredicted RBP8.56□□□□□ -1.04
UBFD1-204ENST00000565634 RASSF7Q02833 373 aa8.56□□□□□ -1.04
UBFD1-204ENST00000565634 FOXC1Q12948 553 aa8.56□□□□□ -1.04
UBFD1-204ENST00000565634 BRICD5Q6PL45 260 aa8.56□□□□□ -1.04
UBFD1-204ENST00000565634 NME9Q86XW9 330 aa8.56□□□□□ -1.04
UBFD1-204ENST00000565634 GPIHBP1Q8IV16 184 aa8.56□□□□□ -1.04
UBFD1-204ENST00000565634 ZCRB1Q8TBF4 217 aaKnown RBP8.56□□□□□ -1.04
UBFD1-204ENST00000565634 CICQ96RK0 1608 aaPredicted RBP8.55□□□□□ -1.04
UBFD1-204ENST00000565634 C4BP0C0L5 1744 aa8.55□□□□□ -1.04
UBFD1-204ENST00000565634 KIF13BQ9NQT8 1826 aa8.55□□□□□ -1.04
UBFD1-204ENST00000565634 ARFGEF1Q9Y6D6 1849 aa8.55□□□□□ -1.04
UBFD1-204ENST00000565634 FMNL1O95466 1100 aaPredicted RBP8.55□□□□□ -1.04
UBFD1-204ENST00000565634 SULF1Q8IWU6 871 aa8.55□□□□□ -1.04
UBFD1-204ENST00000565634 USHBP1Q8N6Y0 703 aa8.55□□□□□ -1.04
UBFD1-204ENST00000565634 FLAD1Q8NFF5 587 aa8.55□□□□□ -1.04
UBFD1-204ENST00000565634 PRDM9Q9NQV7 894 aa8.55□□□□□ -1.04
UBFD1-204ENST00000565634 FCF1Q9Y324 198 aaKnown RBP8.55□□□□□ -1.04
UBFD1-204ENST00000565634 NFAT5O94916 1531 aa8.54□□□□□ -1.04
UBFD1-204ENST00000565634 QRICH2Q9H0J4 1663 aa8.54□□□□□ -1.04
UBFD1-204ENST00000565634 ZMYND10O75800 440 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms