RNA–Protein interactions for RNA: ENST00000565345.5

SCAMP2-206, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 790 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-206ENST00000565345 DBF4Q9UBU7 674 aaPredicted RBP24.71■■□□□ 1.55
SCAMP2-206ENST00000565345 HSPA6P17066 643 aa24.7■■□□□ 1.54
SCAMP2-206ENST00000565345 HOXA10P31260 410 aaPredicted RBP24.7■■□□□ 1.54
SCAMP2-206ENST00000565345 DUSP27Q5VZP5 1158 aa24.7■■□□□ 1.54
SCAMP2-206ENST00000565345 ANP32CO43423 234 aa24.69■■□□□ 1.54
SCAMP2-206ENST00000565345 NCBP3Q53F19 620 aaKnown RBP24.69■■□□□ 1.54
SCAMP2-206ENST00000565345 SLC10A5Q5PT55 438 aa24.69■■□□□ 1.54
SCAMP2-206ENST00000565345 AIMP1Q12904 312 aaKnown RBP24.68■■□□□ 1.54
SCAMP2-206ENST00000565345 CCDC27Q2M243 656 aa24.68■■□□□ 1.54
SCAMP2-206ENST00000565345 RBM46Q8TBY0 533 aaKnown RBP24.68■■□□□ 1.54
SCAMP2-206ENST00000565345 UTP14AQ9BVJ6 771 aaKnown RBP24.68■■□□□ 1.54
SCAMP2-206ENST00000565345 RRAGCQ9HB90 399 aa24.68■■□□□ 1.54
SCAMP2-206ENST00000565345 TCIRG1Q13488 830 aa24.67■■□□□ 1.54
SCAMP2-206ENST00000565345 RTKN2Q8IZC4 609 aa24.67■■□□□ 1.54
SCAMP2-206ENST00000565345 HYPKQ9NX55 129 aa24.67■■□□□ 1.54
SCAMP2-206ENST00000565345 FKBP4Q02790 459 aaKnown RBP eCLIP24.66■■□□□ 1.54
SCAMP2-206ENST00000565345 NLRP10Q86W26 655 aa24.66■■□□□ 1.54
SCAMP2-206ENST00000565345 PLBD2Q8NHP8 589 aa24.66■■□□□ 1.54
SCAMP2-206ENST00000565345 CRAMP1Q96RY5 1269 aa24.66■■□□□ 1.54
SCAMP2-206ENST00000565345 SNED1Q8TER0 1413 aa24.66■■□□□ 1.54
SCAMP2-206ENST00000565345 CC2D2BQ6DHV5 1058 aa24.65■■□□□ 1.54
SCAMP2-206ENST00000565345 DPY19L2Q6NUT2 758 aa24.65■■□□□ 1.54
SCAMP2-206ENST00000565345 C16orf71Q8IYS4 520 aaPredicted RBP24.65■■□□□ 1.54
SCAMP2-206ENST00000565345 RPGRQ92834 1020 aaKnown RBP24.65■■□□□ 1.54
SCAMP2-206ENST00000565345 WDR90Q96KV7 1748 aa24.64■■□□□ 1.54
SCAMP2-206ENST00000565345 ANKRD13DQ6ZTN6 518 aa24.64■■□□□ 1.54
SCAMP2-206ENST00000565345 NLRP3Q96P20 1036 aa24.64■■□□□ 1.54
SCAMP2-206ENST00000565345 MRS2Q9HD23 443 aa24.64■■□□□ 1.54
SCAMP2-206ENST00000565345 RBM17Q96I25 401 aaKnown RBP24.63■■□□□ 1.53
SCAMP2-206ENST00000565345 CHMP4AQ9BY43 222 aa24.63■■□□□ 1.53
SCAMP2-206ENST00000565345 VEGFAP15692 232 aaPredicted RBP24.62■■□□□ 1.53
SCAMP2-206ENST00000565345 FSTL1Q12841 308 aa24.62■■□□□ 1.53
SCAMP2-206ENST00000565345 GRIPAP1Q4V328 841 aa24.62■■□□□ 1.53
SCAMP2-206ENST00000565345 OLFM4Q6UX06 510 aa24.61■■□□□ 1.53
SCAMP2-206ENST00000565345 C3orf67Q6ZVT6 689 aa24.61■■□□□ 1.53
SCAMP2-206ENST00000565345 PSMD1Q99460 953 aa24.61■■□□□ 1.53
SCAMP2-206ENST00000565345 ISCA1Q9BUE6 129 aa24.61■■□□□ 1.53
SCAMP2-206ENST00000565345 WWC1Q8IX03 1113 aa24.6■■□□□ 1.53
SCAMP2-206ENST00000565345 C8orf58Q8NAV2 365 aa24.6■■□□□ 1.53
SCAMP2-206ENST00000565345 TRMT112Q9UI30 125 aaKnown RBP24.59■■□□□ 1.53
SCAMP2-206ENST00000565345 IL16Q14005 1332 aa24.59■■□□□ 1.53
SCAMP2-206ENST00000565345 SH3TC1Q8TE82 1336 aa24.59■■□□□ 1.53
SCAMP2-206ENST00000565345 LAMB2P55268 1798 aa24.58■■□□□ 1.53
SCAMP2-206ENST00000565345 POTECB2RU33 542 aa24.58■■□□□ 1.53
SCAMP2-206ENST00000565345 TRIM28Q13263 835 aaKnown RBP24.58■■□□□ 1.53
SCAMP2-206ENST00000565345 ELL2O00472 640 aaPredicted RBP24.57■■□□□ 1.52
SCAMP2-206ENST00000565345 APLP1P51693 650 aa24.57■■□□□ 1.52
SCAMP2-206ENST00000565345 SYNE4Q8N205 404 aa24.57■■□□□ 1.52
SCAMP2-206ENST00000565345 ZNF277Q9NRM2 450 aaPredicted RBP24.57■■□□□ 1.52
SCAMP2-206ENST00000565345 PPEF1O14829 653 aaPredicted RBP24.56■■□□□ 1.52
SCAMP2-206ENST00000565345 IARSP41252 1262 aaKnown RBP24.56■■□□□ 1.52
SCAMP2-206ENST00000565345 CCDC30Q5VVM6 783 aa24.56■■□□□ 1.52
SCAMP2-206ENST00000565345 SMC1BQ8NDV3 1235 aa24.56■■□□□ 1.52
SCAMP2-206ENST00000565345 PHAXQ9H814 394 aaKnown RBP24.55■■□□□ 1.52
SCAMP2-206ENST00000565345 HCLS1P14317 486 aaPredicted RBP24.54■■□□□ 1.52
SCAMP2-206ENST00000565345 GOLGA2Q08379 1002 aa24.54■■□□□ 1.52
SCAMP2-206ENST00000565345 DDX60Q8IY21 1712 aaKnown RBP24.54■■□□□ 1.52
SCAMP2-206ENST00000565345 ABCC4O15439 1325 aa24.54■■□□□ 1.52
SCAMP2-206ENST00000565345 BBOX1O75936 387 aa24.53■■□□□ 1.52
SCAMP2-206ENST00000565345 DDNO94850 711 aaPredicted RBP24.53■■□□□ 1.52
SCAMP2-206ENST00000565345 TSR2Q969E8 191 aaKnown RBP24.53■■□□□ 1.52
SCAMP2-206ENST00000565345 L3MBTL3Q96JM7 780 aaPredicted RBP24.53■■□□□ 1.52
SCAMP2-206ENST00000565345 ATP6V0A2Q9Y487 856 aa24.53■■□□□ 1.52
SCAMP2-206ENST00000565345 FZD9O00144 591 aa24.52■■□□□ 1.52
SCAMP2-206ENST00000565345 RIC3Q7Z5B4 369 aa24.52■■□□□ 1.52
SCAMP2-206ENST00000565345 TSPYL6Q8N831 410 aa24.52■■□□□ 1.52
SCAMP2-206ENST00000565345 ATP5J2-PTCD1G3V325 749 aa24.51■■□□□ 1.51
SCAMP2-206ENST00000565345 TMX4Q9H1E5 349 aaPredicted RBP24.51■■□□□ 1.51
SCAMP2-206ENST00000565345 SCN4AP35499 1836 aa24.51■■□□□ 1.51
SCAMP2-206ENST00000565345 DDX46Q7L014 1031 aaKnown RBP24.5■■□□□ 1.51
SCAMP2-206ENST00000565345 WDR63Q8IWG1 891 aa24.5■■□□□ 1.51
SCAMP2-206ENST00000565345 SP8Q8IXZ3 490 aa24.5■■□□□ 1.51
SCAMP2-206ENST00000565345 VPS33BQ9H267 617 aa24.5■■□□□ 1.51
SCAMP2-206ENST00000565345 IQCA1LA6NCM1 817 aa24.49■■□□□ 1.51
SCAMP2-206ENST00000565345 DDX58O95786 925 aaKnown RBP24.49■■□□□ 1.51
SCAMP2-206ENST00000565345 GRAPQ13588 217 aa24.49■■□□□ 1.51
SCAMP2-206ENST00000565345 SF3B3Q15393 1217 aaKnown RBP24.49■■□□□ 1.51
SCAMP2-206ENST00000565345 GRAPLQ8TC17 118 aaPredicted RBP24.49■■□□□ 1.51
SCAMP2-206ENST00000565345 JDP2Q8WYK2 163 aa24.49■■□□□ 1.51
SCAMP2-206ENST00000565345 FAM89AQ96GI7 184 aa24.49■■□□□ 1.51
SCAMP2-206ENST00000565345 TWISTNBQ3B726 338 aaPredicted RBP24.48■■□□□ 1.51
SCAMP2-206ENST00000565345 CEP350Q5VT06 3117 aa24.48■■□□□ 1.51
SCAMP2-206ENST00000565345 TMC4Q7Z404 712 aa24.48■■□□□ 1.51
SCAMP2-206ENST00000565345 RTFDC1Q9BY42 306 aaPredicted RBP24.48■■□□□ 1.51
SCAMP2-206ENST00000565345 ZNF541Q9H0D2 1346 aa24.48■■□□□ 1.51
SCAMP2-206ENST00000565345 COL4A5P29400 1685 aa24.47■■□□□ 1.51
SCAMP2-206ENST00000565345 TCERG1O14776 1098 aaKnown RBP24.47■■□□□ 1.51
SCAMP2-206ENST00000565345 ZBTB38Q8NAP3 1195 aaPredicted RBP24.47■■□□□ 1.51
SCAMP2-206ENST00000565345 CCDC191Q8NCU4 936 aa24.47■■□□□ 1.51
SCAMP2-206ENST00000565345 METTL22Q9BUU2 404 aaPredicted RBP24.47■■□□□ 1.51
SCAMP2-206ENST00000565345 SLC51AQ86UW1 340 aa24.46■■□□□ 1.51
SCAMP2-206ENST00000565345 STK31Q9BXU1 1019 aa24.46■■□□□ 1.51
SCAMP2-206ENST00000565345 LRRC37AA6NMS7 1700 aa24.45■■□□□ 1.5
SCAMP2-206ENST00000565345 HSP90B1P14625 803 aaKnown RBP24.45■■□□□ 1.5
SCAMP2-206ENST00000565345 GPC2Q8N158 579 aa24.45■■□□□ 1.5
SCAMP2-206ENST00000565345 DNAJC5GQ8N7S2 189 aa24.45■■□□□ 1.5
SCAMP2-206ENST00000565345 SUPT20HQ8NEM7 779 aa24.45■■□□□ 1.5
SCAMP2-206ENST00000565345 MYD88Q99836 296 aa24.45■■□□□ 1.5
SCAMP2-206ENST00000565345 FANCIQ9NVI1 1328 aa24.44■■□□□ 1.5
SCAMP2-206ENST00000565345 IRS4O14654 1257 aaPredicted RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms