RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 EIF5BO60841 1220 aaKnown RBP24.06■■□□□ 1.44
CLN6-205ENST00000564846 PCCAP05165 728 aaPredicted RBP24.06■■□□□ 1.44
CLN6-205ENST00000564846 CLASRPQ8N2M8 674 aaKnown RBP24.06■■□□□ 1.44
CLN6-205ENST00000564846 TBC1D2BQ9UPU7 963 aa24.06■■□□□ 1.44
CLN6-205ENST00000564846 RFX5P48382 616 aaPredicted RBP24.06■■□□□ 1.44
CLN6-205ENST00000564846 LMBR1LQ6UX01 489 aa24.06■■□□□ 1.44
CLN6-205ENST00000564846 SDSP20132 328 aa24.05■■□□□ 1.44
CLN6-205ENST00000564846 ZBTB38Q8NAP3 1195 aaPredicted RBP24.05■■□□□ 1.44
CLN6-205ENST00000564846 RTL5Q5HYW3 569 aaPredicted RBP24.04■■□□□ 1.44
CLN6-205ENST00000564846 FAM182BQ5T319 152 aa24.04■■□□□ 1.44
CLN6-205ENST00000564846 TBC1D9Q6ZT07 1266 aa24.04■■□□□ 1.44
CLN6-205ENST00000564846 PTF1AQ7RTS3 328 aa24.04■■□□□ 1.44
CLN6-205ENST00000564846 NLRP10Q86W26 655 aa24.04■■□□□ 1.44
CLN6-205ENST00000564846 DDRGK1Q96HY6 314 aa24.04■■□□□ 1.44
CLN6-205ENST00000564846 COL5A3P25940 1745 aaPredicted RBP24.04■■□□□ 1.44
CLN6-205ENST00000564846 NUTM1Q86Y26 1132 aa24.03■■□□□ 1.44
CLN6-205ENST00000564846 BTAF1O14981 1849 aa24.03■■□□□ 1.44
CLN6-205ENST00000564846 PTPN12Q05209 780 aaKnown RBP24.03■■□□□ 1.44
CLN6-205ENST00000564846 TBC1D32Q96NH3 1257 aa24.03■■□□□ 1.44
CLN6-205ENST00000564846 PLA2G12BQ9BX93 195 aa24.03■■□□□ 1.44
CLN6-205ENST00000564846 CNTNAP4Q9C0A0 1308 aa24.03■■□□□ 1.44
CLN6-205ENST00000564846 SASH1O94885 1247 aa24.02■■□□□ 1.44
CLN6-205ENST00000564846 MFAP1P55081 439 aaKnown RBP24.02■■□□□ 1.44
CLN6-205ENST00000564846 USP42Q9H9J4 1324 aaKnown RBP24.02■■□□□ 1.44
CLN6-205ENST00000564846 ANKRD36CQ5JPF3 1778 aa24.01■■□□□ 1.43
CLN6-205ENST00000564846 GPTP24298 496 aa24.01■■□□□ 1.43
CLN6-205ENST00000564846 LINC00116Q8NCU8 138 aa24.01■■□□□ 1.43
CLN6-205ENST00000564846 SIL1Q9H173 461 aa24.01■■□□□ 1.43
CLN6-205ENST00000564846 CDHR2Q9BYE9 1310 aa24.01■■□□□ 1.43
CLN6-205ENST00000564846 CASC1Q6TDU7 716 aa24.01■■□□□ 1.43
CLN6-205ENST00000564846 ZNF34Q8IZ26 560 aa24.01■■□□□ 1.43
CLN6-205ENST00000564846 KLHDC4Q8TBB5 520 aa24.01■■□□□ 1.43
CLN6-205ENST00000564846 TTC41PQ6P2S7 1318 aa24.01■■□□□ 1.43
CLN6-205ENST00000564846 TSHZ3Q63HK5 1081 aa24■■□□□ 1.43
CLN6-205ENST00000564846 FAM89AQ96GI7 184 aa24■■□□□ 1.43
CLN6-205ENST00000564846 CHMP3Q9Y3E7 222 aa24■■□□□ 1.43
CLN6-205ENST00000564846 MYH14Q7Z406 1995 aaKnown RBP23.99■■□□□ 1.43
CLN6-205ENST00000564846 CAMTA2O94983 1202 aa23.99■■□□□ 1.43
CLN6-205ENST00000564846 IFIT2P09913 472 aaKnown RBP23.99■■□□□ 1.43
CLN6-205ENST00000564846 RC3H1Q5TC82 1133 aaKnown RBP23.99■■□□□ 1.43
CLN6-205ENST00000564846 ZNF772Q68DY9 489 aaPredicted RBP23.99■■□□□ 1.43
CLN6-205ENST00000564846 GPATCH3Q96I76 525 aa23.99■■□□□ 1.43
CLN6-205ENST00000564846 BCL11BQ9C0K0 894 aaPredicted RBP23.98■■□□□ 1.43
CLN6-205ENST00000564846 NUP98P52948 1817 aa23.98■■□□□ 1.43
CLN6-205ENST00000564846 C22orf23Q9BZE7 217 aa23.98■■□□□ 1.43
CLN6-205ENST00000564846 AACSQ86V21 672 aa23.97■■□□□ 1.43
CLN6-205ENST00000564846 PI4K2BQ8TCG2 481 aa23.97■■□□□ 1.43
CLN6-205ENST00000564846 CCNL1Q9UK58 526 aaPredicted RBP23.97■■□□□ 1.43
CLN6-205ENST00000564846 SBF2Q86WG5 1849 aa23.97■■□□□ 1.43
CLN6-205ENST00000564846 RGL2O15211 777 aa23.96■■□□□ 1.43
CLN6-205ENST00000564846 FAM196AQ6ZSG2 479 aa23.96■■□□□ 1.43
CLN6-205ENST00000564846 TRMT112Q9UI30 125 aaKnown RBP23.96■■□□□ 1.43
CLN6-205ENST00000564846 ZNF652Q9Y2D9 606 aa23.96■■□□□ 1.43
CLN6-205ENST00000564846 UBN2Q6ZU65 1347 aa23.96■■□□□ 1.43
CLN6-205ENST00000564846 ERC2O15083 957 aa23.96■■□□□ 1.43
CLN6-205ENST00000564846 GLRX3O76003 335 aaKnown RBP23.96■■□□□ 1.43
CLN6-205ENST00000564846 CSF1RP07333 972 aa23.96■■□□□ 1.43
CLN6-205ENST00000564846 PARP10Q53GL7 1025 aa23.96■■□□□ 1.43
CLN6-205ENST00000564846 KRT27Q7Z3Y8 459 aa23.96■■□□□ 1.43
CLN6-205ENST00000564846 ECHDC1Q9NTX5 307 aa23.96■■□□□ 1.43
CLN6-205ENST00000564846 EAF2Q96CJ1 260 aaPredicted RBP23.95■■□□□ 1.42
CLN6-205ENST00000564846 TRIM6-TRIM34B2RNG4 842 aa23.94■■□□□ 1.42
CLN6-205ENST00000564846 MSH5O43196 834 aa23.94■■□□□ 1.42
CLN6-205ENST00000564846 RBM6P78332 1123 aaKnown RBP23.94■■□□□ 1.42
CLN6-205ENST00000564846 CCDC57Q2TAC2 916 aa23.94■■□□□ 1.42
CLN6-205ENST00000564846 CLEC4GQ6UXB4 293 aa23.94■■□□□ 1.42
CLN6-205ENST00000564846 KCNQ4P56696 695 aa23.93■■□□□ 1.42
CLN6-205ENST00000564846 AK7Q96M32 723 aa23.93■■□□□ 1.42
CLN6-205ENST00000564846 TUBGCP6Q96RT7 1819 aa23.93■■□□□ 1.42
CLN6-205ENST00000564846 LY75O60449 1722 aa23.93■■□□□ 1.42
CLN6-205ENST00000564846 IRS4O14654 1257 aaPredicted RBP23.93■■□□□ 1.42
CLN6-205ENST00000564846 RPS6KA4O75676 772 aa23.93■■□□□ 1.42
CLN6-205ENST00000564846 CIAO1O76071 339 aa23.93■■□□□ 1.42
CLN6-205ENST00000564846 IL15P40933 162 aaPredicted RBP23.93■■□□□ 1.42
CLN6-205ENST00000564846 FBXO3Q9UK99 471 aa23.93■■□□□ 1.42
CLN6-205ENST00000564846 RBM25P49756 843 aaKnown RBP23.92■■□□□ 1.42
CLN6-205ENST00000564846 RILPL2Q969X0 211 aa23.92■■□□□ 1.42
CLN6-205ENST00000564846 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.92■■□□□ 1.42
CLN6-205ENST00000564846 EYA2O00167 538 aa23.91■■□□□ 1.42
CLN6-205ENST00000564846 PDE8AO60658 829 aa23.91■■□□□ 1.42
CLN6-205ENST00000564846 TFCP2Q12800 502 aa23.91■■□□□ 1.42
CLN6-205ENST00000564846 UTP14AQ9BVJ6 771 aaKnown RBP23.91■■□□□ 1.42
CLN6-205ENST00000564846 CTSWP56202 376 aa23.91■■□□□ 1.42
CLN6-205ENST00000564846 ATG9AQ7Z3C6 839 aa23.91■■□□□ 1.42
CLN6-205ENST00000564846 SH3TC1Q8TE82 1336 aa23.9■■□□□ 1.42
CLN6-205ENST00000564846 IFIT5Q13325 482 aaKnown RBP23.9■■□□□ 1.42
CLN6-205ENST00000564846 TNNI3KQ59H18 835 aa23.9■■□□□ 1.42
CLN6-205ENST00000564846 SUSD4Q5VX71 490 aa23.9■■□□□ 1.42
CLN6-205ENST00000564846 SYNE4Q8N205 404 aa23.9■■□□□ 1.42
CLN6-205ENST00000564846 CCDC8Q9H0W5 538 aaPredicted RBP23.9■■□□□ 1.42
CLN6-205ENST00000564846 NIP7Q9Y221 180 aaKnown RBP eCLIP23.9■■□□□ 1.42
CLN6-205ENST00000564846 FPGT-TNNI3KV9GXZ4 949 aa23.9■■□□□ 1.42
CLN6-205ENST00000564846 BCORQ6W2J9 1755 aa23.89■■□□□ 1.42
CLN6-205ENST00000564846 HSP90B1P14625 803 aaKnown RBP23.89■■□□□ 1.42
CLN6-205ENST00000564846 CNTROBQ8N137 903 aa23.89■■□□□ 1.42
CLN6-205ENST00000564846 TTLL11Q8NHH1 800 aa23.89■■□□□ 1.42
CLN6-205ENST00000564846 GPR108Q9NPR9 543 aa23.89■■□□□ 1.42
CLN6-205ENST00000564846 RTCBQ9Y3I0 505 aaKnown RBP23.88■■□□□ 1.41
CLN6-205ENST00000564846 GNPATO15228 680 aa23.87■■□□□ 1.41
CLN6-205ENST00000564846 REC8O95072 547 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms