RNA–Protein interactions for RNA: ENST00000564590.5

SCAPER-212, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 2,507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-212ENST00000564590 CCDC191Q8NCU4 936 aa17.35■□□□□ 0.37
SCAPER-212ENST00000564590 UBN2Q6ZU65 1347 aa17.35■□□□□ 0.37
SCAPER-212ENST00000564590 FOXO4P98177 505 aa17.35■□□□□ 0.37
SCAPER-212ENST00000564590 SASH1O94885 1247 aa17.34■□□□□ 0.37
SCAPER-212ENST00000564590 SDSP20132 328 aa17.34■□□□□ 0.37
SCAPER-212ENST00000564590 SMARCC1Q92922 1105 aaPredicted RBP17.34■□□□□ 0.37
SCAPER-212ENST00000564590 CCNL1Q9UK58 526 aaPredicted RBP17.34■□□□□ 0.37
SCAPER-212ENST00000564590 ONECUT3O60422 494 aaPredicted RBP17.34■□□□□ 0.37
SCAPER-212ENST00000564590 TRIM37O94972 964 aa17.34■□□□□ 0.37
SCAPER-212ENST00000564590 SLC4A3P48751 1232 aa17.34■□□□□ 0.37
SCAPER-212ENST00000564590 TBC1D9Q6ZT07 1266 aa17.34■□□□□ 0.37
SCAPER-212ENST00000564590 KIF1BPQ96EK5 621 aa17.34■□□□□ 0.37
SCAPER-212ENST00000564590 NUP98P52948 1817 aa17.33■□□□□ 0.37
SCAPER-212ENST00000564590 NLRP10Q86W26 655 aa17.33■□□□□ 0.36
SCAPER-212ENST00000564590 TLR7Q9NYK1 1049 aaKnown RBP17.33■□□□□ 0.36
SCAPER-212ENST00000564590 BRWD3Q6RI45 1802 aa17.33■□□□□ 0.36
SCAPER-212ENST00000564590 PTPN12Q05209 780 aaKnown RBP17.32■□□□□ 0.36
SCAPER-212ENST00000564590 CCDC8Q9H0W5 538 aaPredicted RBP17.32■□□□□ 0.36
SCAPER-212ENST00000564590 SALL3Q9BXA9 1300 aa17.32■□□□□ 0.36
SCAPER-212ENST00000564590 PHF14O94880 888 aa17.32■□□□□ 0.36
SCAPER-212ENST00000564590 BICDL1Q6ZP65 573 aa17.32■□□□□ 0.36
SCAPER-212ENST00000564590 RFX5P48382 616 aaPredicted RBP17.31■□□□□ 0.36
SCAPER-212ENST00000564590 G3BP1Q13283 466 aaKnown RBP eCLIP17.31■□□□□ 0.36
SCAPER-212ENST00000564590 RILPL2Q969X0 211 aa17.31■□□□□ 0.36
SCAPER-212ENST00000564590 TRMT112Q9UI30 125 aaKnown RBP17.31■□□□□ 0.36
SCAPER-212ENST00000564590 NOP58Q9Y2X3 529 aaKnown RBP17.31■□□□□ 0.36
SCAPER-212ENST00000564590 COL15A1P39059 1388 aa17.31■□□□□ 0.36
SCAPER-212ENST00000564590 TRIM6-TRIM34B2RNG4 842 aa17.31■□□□□ 0.36
SCAPER-212ENST00000564590 RABL6Q3YEC7 729 aaPredicted RBP17.31■□□□□ 0.36
SCAPER-212ENST00000564590 KRT27Q7Z3Y8 459 aa17.31■□□□□ 0.36
SCAPER-212ENST00000564590 AACSQ86V21 672 aa17.31■□□□□ 0.36
SCAPER-212ENST00000564590 GNPATO15228 680 aa17.3■□□□□ 0.36
SCAPER-212ENST00000564590 EAF2Q96CJ1 260 aaPredicted RBP17.3■□□□□ 0.36
SCAPER-212ENST00000564590 SBF2Q86WG5 1849 aa17.3■□□□□ 0.36
SCAPER-212ENST00000564590 RAB11FIP3O75154 756 aa17.3■□□□□ 0.36
SCAPER-212ENST00000564590 CAMTA2O94983 1202 aa17.3■□□□□ 0.36
SCAPER-212ENST00000564590 LRRC4BQ9NT99 713 aa17.3■□□□□ 0.36
SCAPER-212ENST00000564590 SRP68Q9UHB9 627 aaKnown RBP17.3■□□□□ 0.36
SCAPER-212ENST00000564590 HDAC5Q9UQL6 1122 aa17.3■□□□□ 0.36
SCAPER-212ENST00000564590 PUS3Q9BZE2 481 aaKnown RBP17.29■□□□□ 0.36
SCAPER-212ENST00000564590 HCLS1P14317 486 aaPredicted RBP17.29■□□□□ 0.36
SCAPER-212ENST00000564590 LRRC24Q50LG9 513 aa17.29■□□□□ 0.36
SCAPER-212ENST00000564590 CLASRPQ8N2M8 674 aaKnown RBP17.29■□□□□ 0.36
SCAPER-212ENST00000564590 NHSQ6T4R5 1651 aa17.29■□□□□ 0.36
SCAPER-212ENST00000564590 TFCP2Q12800 502 aa17.28■□□□□ 0.36
SCAPER-212ENST00000564590 SUSD4Q5VX71 490 aa17.28■□□□□ 0.36
SCAPER-212ENST00000564590 ZBTB38Q8NAP3 1195 aaPredicted RBP17.28■□□□□ 0.36
SCAPER-212ENST00000564590 NIP7Q9Y221 180 aaKnown RBP eCLIP17.28■□□□□ 0.36
SCAPER-212ENST00000564590 NDUFB9Q9Y6M9 179 aa17.28■□□□□ 0.36
SCAPER-212ENST00000564590 COL5A3P25940 1745 aaPredicted RBP17.28■□□□□ 0.36
SCAPER-212ENST00000564590 CCDC24Q8N4L8 307 aa17.28■□□□□ 0.36
SCAPER-212ENST00000564590 UTRNP46939 3433 aa17.28■□□□□ 0.36
SCAPER-212ENST00000564590 SRCAPQ6ZRS2 3230 aa17.27■□□□□ 0.36
SCAPER-212ENST00000564590 HSP90AB4PQ58FF6 505 aa17.27■□□□□ 0.36
SCAPER-212ENST00000564590 IPO9Q96P70 1041 aaKnown RBP17.27■□□□□ 0.36
SCAPER-212ENST00000564590 IRS4O14654 1257 aaPredicted RBP17.26■□□□□ 0.35
SCAPER-212ENST00000564590 PCCAP05165 728 aaPredicted RBP17.26■□□□□ 0.35
SCAPER-212ENST00000564590 IFIT2P09913 472 aaKnown RBP17.26■□□□□ 0.35
SCAPER-212ENST00000564590 PI4K2BQ8TCG2 481 aa17.26■□□□□ 0.35
SCAPER-212ENST00000564590 GREM2Q9H772 168 aa17.26■□□□□ 0.35
SCAPER-212ENST00000564590 CDC45O75419 566 aa17.26■□□□□ 0.35
SCAPER-212ENST00000564590 USPL1Q5W0Q7 1092 aa17.26■□□□□ 0.35
SCAPER-212ENST00000564590 ZNF34Q8IZ26 560 aa17.26■□□□□ 0.35
SCAPER-212ENST00000564590 UPF2Q9HAU5 1272 aaKnown RBP17.26■□□□□ 0.35
SCAPER-212ENST00000564590 COPRSQ9NQ92 184 aa17.26■□□□□ 0.35
SCAPER-212ENST00000564590 ERVV-1B6SEH8 477 aa17.25■□□□□ 0.35
SCAPER-212ENST00000564590 TRIM28Q13263 835 aaKnown RBP17.25■□□□□ 0.35
SCAPER-212ENST00000564590 OSBPL3Q9H4L5 887 aa17.25■□□□□ 0.35
SCAPER-212ENST00000564590 ANKRD36CQ5JPF3 1778 aa17.25■□□□□ 0.35
SCAPER-212ENST00000564590 HSP90AB3PQ58FF7 597 aa17.24■□□□□ 0.35
SCAPER-212ENST00000564590 C22orf23Q9BZE7 217 aa17.24■□□□□ 0.35
SCAPER-212ENST00000564590 RBM6P78332 1123 aaKnown RBP17.24■□□□□ 0.35
SCAPER-212ENST00000564590 CCDC57Q2TAC2 916 aa17.24■□□□□ 0.35
SCAPER-212ENST00000564590 FAM196AQ6ZSG2 479 aa17.24■□□□□ 0.35
SCAPER-212ENST00000564590 TBC1D32Q96NH3 1257 aa17.24■□□□□ 0.35
SCAPER-212ENST00000564590 BCL11BQ9C0K0 894 aaPredicted RBP17.24■□□□□ 0.35
SCAPER-212ENST00000564590 IL25Q9H293 177 aa17.24■□□□□ 0.35
SCAPER-212ENST00000564590 TIMM10P62072 90 aa17.23■□□□□ 0.35
SCAPER-212ENST00000564590 ZNF772Q68DY9 489 aaPredicted RBP17.23■□□□□ 0.35
SCAPER-212ENST00000564590 ATG9AQ7Z3C6 839 aa17.23■□□□□ 0.35
SCAPER-212ENST00000564590 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
SCAPER-212ENST00000564590 EDC3Q96F86 508 aaKnown RBP17.23■□□□□ 0.35
SCAPER-212ENST00000564590 RGS17Q9UGC6 210 aaPredicted RBP17.23■□□□□ 0.35
SCAPER-212ENST00000564590 TTLL11Q8NHH1 800 aa17.23■□□□□ 0.35
SCAPER-212ENST00000564590 STAP2Q9UGK3 403 aa17.23■□□□□ 0.35
SCAPER-212ENST00000564590 ITGA6P23229 1130 aa17.22■□□□□ 0.35
SCAPER-212ENST00000564590 TBC1D9BQ66K14 1250 aa17.22■□□□□ 0.35
SCAPER-212ENST00000564590 BOLA2Q9H3K6 86 aa17.22■□□□□ 0.35
SCAPER-212ENST00000564590 BCL2L12Q9HB09 334 aa17.22■□□□□ 0.35
SCAPER-212ENST00000564590 DBNLQ9UJU6 430 aaKnown RBP17.22■□□□□ 0.35
SCAPER-212ENST00000564590 TAF7LQ5H9L4 462 aa17.22■□□□□ 0.35
SCAPER-212ENST00000564590 NEUROD6Q96NK8 337 aa17.22■□□□□ 0.35
SCAPER-212ENST00000564590 DBNDD2Q9BQY9 259 aa17.22■□□□□ 0.35
SCAPER-212ENST00000564590 ARHGEF1Q92888 912 aaKnown RBP17.21■□□□□ 0.35
SCAPER-212ENST00000564590 RTCBQ9Y3I0 505 aaKnown RBP17.21■□□□□ 0.35
SCAPER-212ENST00000564590 CNTNAP4Q9C0A0 1308 aa17.21■□□□□ 0.35
SCAPER-212ENST00000564590 CTSWP56202 376 aa17.21■□□□□ 0.35
SCAPER-212ENST00000564590 TNNI3KQ59H18 835 aa17.21■□□□□ 0.35
SCAPER-212ENST00000564590 POTEAQ6S8J7 498 aa17.21■□□□□ 0.35
SCAPER-212ENST00000564590 FPGT-TNNI3KV9GXZ4 949 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms