RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	PTGS1	P23219	599 aa		4.89	□□□□□ -1.63
MACF1-231	ENST00000564288	PPIP5K1	Q6PFW1	1433 aa		4.89	□□□□□ -1.63
MACF1-231	ENST00000564288	RUFY4	Q6ZNE9	571 aa		4.89	□□□□□ -1.63
MACF1-231	ENST00000564288	EPRS	P07814	1512 aa	Known RBP	4.89	□□□□□ -1.63
MACF1-231	ENST00000564288	VPS37C	A5D8V6	355 aa	Predicted RBP	4.89	□□□□□ -1.63
MACF1-231	ENST00000564288	CCDC170	Q8IYT3	715 aa		4.89	□□□□□ -1.63
MACF1-231	ENST00000564288	CCDC155	Q8N6L0	562 aa		4.89	□□□□□ -1.63
MACF1-231	ENST00000564288	ASXL1	Q8IXJ9	1541 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	MUM1L1	Q5H9M0	696 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	MAGEC2	Q9UBF1	373 aa	Predicted RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	SUFU	Q9UMX1	484 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	ZFYVE9	O95405	1425 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	CCDC57	Q2TAC2	916 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	GIGYF2	Q6Y7W6	1299 aa	Known RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	NAP1L1	P55209	391 aa	Known RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	SSH2	Q76I76	1423 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	TRMT2A	Q8IZ69	625 aa	Known RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	PPP1R12B	O60237	982 aa	Predicted RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	BMP15	O95972	392 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	NBPF20	Q3BBV1	942 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	CFAP58	Q5T655	872 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	APBB1	O00213	710 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	PDE6B	P35913	854 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	RASSF2	P50749	326 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	SCAF11	Q99590	1463 aa	Known RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	DIAPH1	O60610	1272 aa	Known RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	CABS1	Q96KC9	395 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	MRC2	Q9UBG0	1479 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	NEURL4	Q96JN8	1562 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	DNAJC8	O75937	253 aa	Predicted RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	USH1C	Q9Y6N9	552 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	APBA1	Q02410	837 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	VAV2	P52735	878 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	TYRO3	Q06418	890 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	CCDC181	Q5TID7	509 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	BRPF1	P55201	1214 aa	Predicted RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	PPP2R3A	Q06190	1150 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	STIM1	Q13586	685 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	TAOK3	Q9H2K8	898 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	SPECC1	Q5M775	1068 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	BSDC1	Q9NW68	430 aa	Predicted RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	ZBTB12	Q9Y330	459 aa	Predicted RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	ATRIP	Q8WXE1	791 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	CDC25B	P30305	580 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	CPLX4	Q7Z7G2	160 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	VPS18	Q9P253	973 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	TOPBP1	Q92547	1522 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	EIF3D	O15371	548 aa	Known RBP eCLIP	4.88	□□□□□ -1.63	2e-6	■□□□□ 11
MACF1-231	ENST00000564288	HCLS1	P14317	486 aa	Predicted RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	PRPH	P41219	470 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	FCHSD1	Q86WN1	690 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	TMTC1	Q8IUR5	882 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	EIF3CL	B5ME19	914 aa	Known RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	ATP2B3	Q16720	1220 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	GBP7	Q8N8V2	638 aa	Predicted RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	EIF3C	Q99613	913 aa	Known RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	CLUL1	Q15846	466 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	TRIM7	Q9C029	511 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	TFIP11	Q9UBB9	837 aa	Known RBP	4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	STAG3	Q9UJ98	1225 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	CCDC69	A6NI79	296 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	TULP2	O00295	520 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	PODN	Q7Z5L7	613 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	MRFAP1L1	Q96HT8	127 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	BABAM1	Q9NWV8	329 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	ANAPC4	Q9UJX5	808 aa		4.88	□□□□□ -1.63
MACF1-231	ENST00000564288	AFAP1L1	Q8TED9	768 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	AOX1	Q06278	1338 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	CLASP1	Q7Z460	1538 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	DYNC1I2	Q13409	638 aa	Known RBP	4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	STK38	Q15208	465 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	FAM71B	Q8TC56	605 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	POLR3A	O14802	1390 aa	Predicted RBP	4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	CTTNBP2	Q8WZ74	1663 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	NDUFAB1	O14561	156 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	PLEKHG2	Q9H7P9	1386 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	ALDH3A1	P30838	453 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	ARMC9	Q7Z3E5	817 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	IFT20	Q8IY31	132 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	TRAPPC8	Q9Y2L5	1435 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	CFAP100	Q494V2	611 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	PCMTD1	Q96MG8	357 aa	Predicted RBP	4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	FAM114A1	Q8IWE2	563 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	ARHGAP18	Q8N392	663 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	BRD1	O95696	1058 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	PEX19	P40855	299 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	EVC	P57679	992 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	SUGP1	Q8IWZ8	645 aa	Known RBP	4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	PCK1	P35558	622 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	PPP2R5E	Q16537	467 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	GAS2L2	Q8NHY3	880 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	EXOSC9	Q06265	439 aa	Known RBP	4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	MOV10L1	Q9BXT6	1211 aa	Known RBP	4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	URB2	Q14146	1524 aa	Known RBP	4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	DUOX2	Q9NRD8	1548 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	KLHL10	Q6JEL2	608 aa		4.87	□□□□□ -1.63
MACF1-231	ENST00000564288	PSMD7	P51665	324 aa		4.87	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms