RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 ISCA1Q9BUE6 129 aa16.27■□□□□ 0.2
SPG7-209ENST00000564047 TFCP2L1Q9NZI6 479 aa16.27■□□□□ 0.2
SPG7-209ENST00000564047 ZNF652Q9Y2D9 606 aa16.27■□□□□ 0.2
SPG7-209ENST00000564047 PNPLA7Q6ZV29 1317 aa16.26■□□□□ 0.19
SPG7-209ENST00000564047 PHF14O94880 888 aa16.26■□□□□ 0.19
SPG7-209ENST00000564047 RFC4P35249 363 aa16.26■□□□□ 0.19
SPG7-209ENST00000564047 CWF19L2Q2TBE0 894 aaKnown RBP16.26■□□□□ 0.19
SPG7-209ENST00000564047 SMIM5Q71RC9 77 aa16.26■□□□□ 0.19
SPG7-209ENST00000564047 ARFGEF2Q9Y6D5 1785 aa16.26■□□□□ 0.19
SPG7-209ENST00000564047 ZPR1O75312 459 aa16.25■□□□□ 0.19
SPG7-209ENST00000564047 CCDC191Q8NCU4 936 aa16.25■□□□□ 0.19
SPG7-209ENST00000564047 ZBTB40Q9NUA8 1239 aa16.25■□□□□ 0.19
SPG7-209ENST00000564047 N4BP2Q86UW6 1770 aaPredicted RBP16.25■□□□□ 0.19
SPG7-209ENST00000564047 USP42Q9H9J4 1324 aaKnown RBP16.24■□□□□ 0.19
SPG7-209ENST00000564047 ATP5J2-PTCD1G3V325 749 aa16.24■□□□□ 0.19
SPG7-209ENST00000564047 GNAI3P08754 354 aa16.24■□□□□ 0.19
SPG7-209ENST00000564047 GCKRQ14397 625 aa16.24■□□□□ 0.19
SPG7-209ENST00000564047 USPL1Q5W0Q7 1092 aa16.24■□□□□ 0.19
SPG7-209ENST00000564047 ZNF34Q8IZ26 560 aa16.24■□□□□ 0.19
SPG7-209ENST00000564047 USP44Q9H0E7 712 aa16.24■□□□□ 0.19
SPG7-209ENST00000564047 UBR3Q6ZT12 1888 aa16.23■□□□□ 0.19
SPG7-209ENST00000564047 MEIS3Q99687 375 aa16.23■□□□□ 0.19
SPG7-209ENST00000564047 BCL2L12Q9HB09 334 aa16.23■□□□□ 0.19
SPG7-209ENST00000564047 CWC25Q9NXE8 425 aaPredicted RBP16.23■□□□□ 0.19
SPG7-209ENST00000564047 SRP68Q9UHB9 627 aaKnown RBP16.23■□□□□ 0.19
SPG7-209ENST00000564047 UTYO14607 1347 aa16.22■□□□□ 0.19
SPG7-209ENST00000564047 GRM8O00222 908 aa16.22■□□□□ 0.19
SPG7-209ENST00000564047 C9orf78Q9NZ63 289 aaPredicted RBP16.22■□□□□ 0.19
SPG7-209ENST00000564047 HDAC5Q9UQL6 1122 aa16.22■□□□□ 0.19
SPG7-209ENST00000564047 BCORQ6W2J9 1755 aa16.22■□□□□ 0.19
SPG7-209ENST00000564047 SCN7AQ01118 1682 aa16.21■□□□□ 0.19
SPG7-209ENST00000564047 UBTFL1P0CB47 393 aaPredicted RBP16.21■□□□□ 0.19
SPG7-209ENST00000564047 PARP10Q53GL7 1025 aa16.21■□□□□ 0.19
SPG7-209ENST00000564047 NLRP10Q86W26 655 aa16.21■□□□□ 0.19
SPG7-209ENST00000564047 COL23A1Q86Y22 540 aaPredicted RBP16.21■□□□□ 0.19
SPG7-209ENST00000564047 ZNF526Q8TF50 670 aaPredicted RBP16.21■□□□□ 0.19
SPG7-209ENST00000564047 H7C1W4 665 aa16.2■□□□□ 0.18
SPG7-209ENST00000564047 MSH5O43196 834 aa16.2■□□□□ 0.18
SPG7-209ENST00000564047 NBPF7P0C2Y1 421 aaPredicted RBP16.2■□□□□ 0.18
SPG7-209ENST00000564047 GPTP24298 496 aa16.2■□□□□ 0.18
SPG7-209ENST00000564047 PPP4R2Q9NY27 417 aa16.2■□□□□ 0.18
SPG7-209ENST00000564047 NIP7Q9Y221 180 aaKnown RBP eCLIP16.2■□□□□ 0.18
SPG7-209ENST00000564047 C4AP0C0L4 1744 aa16.19■□□□□ 0.18
SPG7-209ENST00000564047 GNAI2P04899 355 aa16.19■□□□□ 0.18
SPG7-209ENST00000564047 GYS1P13807 737 aa16.19■□□□□ 0.18
SPG7-209ENST00000564047 TBC1D9BQ66K14 1250 aa16.19■□□□□ 0.18
SPG7-209ENST00000564047 UBN2Q6ZU65 1347 aa16.19■□□□□ 0.18
SPG7-209ENST00000564047 PCCAP05165 728 aaPredicted RBP16.18■□□□□ 0.18
SPG7-209ENST00000564047 CASP7P55210 303 aa16.18■□□□□ 0.18
SPG7-209ENST00000564047 ZBTB38Q8NAP3 1195 aaPredicted RBP16.18■□□□□ 0.18
SPG7-209ENST00000564047 NUP98P52948 1817 aa16.17■□□□□ 0.18
SPG7-209ENST00000564047 PCNTO95613 3336 aa16.17■□□□□ 0.18
SPG7-209ENST00000564047 SUSD4Q5VX71 490 aa16.17■□□□□ 0.18
SPG7-209ENST00000564047 PPP1R42Q7Z4L9 355 aa16.17■□□□□ 0.18
SPG7-209ENST00000564047 SETDB2Q96T68 719 aa16.17■□□□□ 0.18
SPG7-209ENST00000564047 C1orf115Q9H7X2 142 aa16.17■□□□□ 0.18
SPG7-209ENST00000564047 ANKRD36CQ5JPF3 1778 aa16.17■□□□□ 0.18
SPG7-209ENST00000564047 UBE3BQ7Z3V4 1068 aa16.16■□□□□ 0.18
SPG7-209ENST00000564047 RPAP2Q8IXW5 612 aaPredicted RBP16.16■□□□□ 0.18
SPG7-209ENST00000564047 NLGN1Q8N2Q7 840 aa16.16■□□□□ 0.18
SPG7-209ENST00000564047 UTP14AQ9BVJ6 771 aaKnown RBP16.16■□□□□ 0.18
SPG7-209ENST00000564047 TRMT112Q9UI30 125 aaKnown RBP16.16■□□□□ 0.18
SPG7-209ENST00000564047 PCDHB15Q9Y5E8 787 aa16.16■□□□□ 0.18
SPG7-209ENST00000564047 CD2APQ9Y5K6 639 aa16.16■□□□□ 0.18
SPG7-209ENST00000564047 LRRFIP2Q9Y608 721 aaKnown RBP16.16■□□□□ 0.18
SPG7-209ENST00000564047 CDHR2Q9BYE9 1310 aa16.16■□□□□ 0.18
SPG7-209ENST00000564047 NFIXQ14938 502 aa16.15■□□□□ 0.18
SPG7-209ENST00000564047 BICDL1Q6ZP65 573 aa16.15■□□□□ 0.18
SPG7-209ENST00000564047 SUCLG2Q96I99 432 aa16.15■□□□□ 0.18
SPG7-209ENST00000564047 CARMIL3Q8ND23 1372 aa16.14■□□□□ 0.17
SPG7-209ENST00000564047 NTSR2O95665 410 aa16.14■□□□□ 0.17
SPG7-209ENST00000564047 TM4SF1P30408 202 aa16.14■□□□□ 0.17
SPG7-209ENST00000564047 APLP1P51693 650 aa16.14■□□□□ 0.17
SPG7-209ENST00000564047 CEP85Q6P2H3 762 aa16.14■□□□□ 0.17
SPG7-209ENST00000564047 FAM89AQ96GI7 184 aa16.14■□□□□ 0.17
SPG7-209ENST00000564047 KAZALD1Q96I82 304 aa16.14■□□□□ 0.17
SPG7-209ENST00000564047 NYXQ9GZU5 481 aa16.14■□□□□ 0.17
SPG7-209ENST00000564047 AFDNP55196 1824 aaKnown RBP16.14■□□□□ 0.17
SPG7-209ENST00000564047 SH3TC1Q8TE82 1336 aa16.14■□□□□ 0.17
SPG7-209ENST00000564047 MSL1Q68DK7 614 aa16.13■□□□□ 0.17
SPG7-209ENST00000564047 ANKRD44Q8N8A2 993 aa16.13■□□□□ 0.17
SPG7-209ENST00000564047 JARID2Q92833 1246 aaPredicted RBP16.13■□□□□ 0.17
SPG7-209ENST00000564047 CCDC136Q96JN2 1154 aa16.13■□□□□ 0.17
SPG7-209ENST00000564047 PLA2G12BQ9BX93 195 aa16.13■□□□□ 0.17
SPG7-209ENST00000564047 HSP90B1P14625 803 aaKnown RBP16.12■□□□□ 0.17
SPG7-209ENST00000564047 ATP8B2P98198 1209 aa16.12■□□□□ 0.17
SPG7-209ENST00000564047 MTX1Q13505 466 aa16.12■□□□□ 0.17
SPG7-209ENST00000564047 HDAC1Q13547 482 aaPredicted RBP16.12■□□□□ 0.17
SPG7-209ENST00000564047 RTL5Q5HYW3 569 aaPredicted RBP16.12■□□□□ 0.17
SPG7-209ENST00000564047 TPTE2Q6XPS3 522 aa16.12■□□□□ 0.17
SPG7-209ENST00000564047 FAM177BA6PVY3 158 aa16.11■□□□□ 0.17
SPG7-209ENST00000564047 IRS4O14654 1257 aaPredicted RBP16.11■□□□□ 0.17
SPG7-209ENST00000564047 FOXO4P98177 505 aa16.11■□□□□ 0.17
SPG7-209ENST00000564047 RABL6Q3YEC7 729 aaPredicted RBP16.11■□□□□ 0.17
SPG7-209ENST00000564047 NBPF5PQ86XG9 351 aaPredicted RBP16.11■□□□□ 0.17
SPG7-209ENST00000564047 SIRT2Q8IXJ6 389 aa16.11■□□□□ 0.17
SPG7-209ENST00000564047 RWDD1Q9H446 243 aaPredicted RBP16.11■□□□□ 0.17
SPG7-209ENST00000564047 BICC1Q9H694 974 aaKnown RBP16.11■□□□□ 0.17
SPG7-209ENST00000564047 KIF3CO14782 793 aa16.1■□□□□ 0.17
SPG7-209ENST00000564047 PDE8AO60658 829 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms