RNA–Protein interactions for RNA: ENST00000563833.1

AF213884.3-201, humanhuman

BASIC

Gene AF213884.3, Length 479 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF213884.3-201ENST00000563833 RPGRQ92834 1020 aaKnown RBP28.83■■■□□ 2.21
AF213884.3-201ENST00000563833 FKBP4Q02790 459 aaKnown RBP eCLIP28.82■■■□□ 2.2
AF213884.3-201ENST00000563833 DUSP27Q5VZP5 1158 aa28.82■■■□□ 2.2
AF213884.3-201ENST00000563833 DPY19L2Q6NUT2 758 aa28.82■■■□□ 2.2
AF213884.3-201ENST00000563833 WDR90Q96KV7 1748 aa28.81■■■□□ 2.2
AF213884.3-201ENST00000563833 ZNF853P0CG23 659 aa28.81■■■□□ 2.2
AF213884.3-201ENST00000563833 VEGFAP15692 232 aaPredicted RBP28.81■■■□□ 2.2
AF213884.3-201ENST00000563833 HSP90AB3PQ58FF7 597 aa28.81■■■□□ 2.2
AF213884.3-201ENST00000563833 C3orf67Q6ZVT6 689 aa28.81■■■□□ 2.2
AF213884.3-201ENST00000563833 UTP14AQ9BVJ6 771 aaKnown RBP28.81■■■□□ 2.2
AF213884.3-201ENST00000563833 APLP1P51693 650 aa28.8■■■□□ 2.2
AF213884.3-201ENST00000563833 FSTL1Q12841 308 aa28.8■■■□□ 2.2
AF213884.3-201ENST00000563833 RTKN2Q8IZC4 609 aa28.8■■■□□ 2.2
AF213884.3-201ENST00000563833 ZNF277Q9NRM2 450 aaPredicted RBP28.8■■■□□ 2.2
AF213884.3-201ENST00000563833 IFT57Q9NWB7 429 aa28.8■■■□□ 2.2
AF213884.3-201ENST00000563833 HOXA10P31260 410 aaPredicted RBP28.79■■■□□ 2.2
AF213884.3-201ENST00000563833 CALD1Q05682 793 aaKnown RBP28.78■■■□□ 2.2
AF213884.3-201ENST00000563833 NLRP10Q86W26 655 aa28.78■■■□□ 2.2
AF213884.3-201ENST00000563833 DBF4Q9UBU7 674 aaPredicted RBP28.78■■■□□ 2.2
AF213884.3-201ENST00000563833 SNED1Q8TER0 1413 aa28.77■■■□□ 2.2
AF213884.3-201ENST00000563833 ZNF316A6NFI3 1004 aaPredicted RBP28.77■■■□□ 2.2
AF213884.3-201ENST00000563833 GNAI1P63096 354 aa28.77■■■□□ 2.2
AF213884.3-201ENST00000563833 TCIRG1Q13488 830 aa28.77■■■□□ 2.2
AF213884.3-201ENST00000563833 SMC1BQ8NDV3 1235 aa28.77■■■□□ 2.2
AF213884.3-201ENST00000563833 RNF123Q5XPI4 1314 aa28.76■■■□□ 2.19
AF213884.3-201ENST00000563833 POTECB2RU33 542 aa28.76■■■□□ 2.19
AF213884.3-201ENST00000563833 RBM17Q96I25 401 aaKnown RBP28.76■■■□□ 2.19
AF213884.3-201ENST00000563833 NLRP3Q96P20 1036 aa28.76■■■□□ 2.19
AF213884.3-201ENST00000563833 CRAMP1Q96RY5 1269 aa28.76■■■□□ 2.19
AF213884.3-201ENST00000563833 DDNO94850 711 aaPredicted RBP28.75■■■□□ 2.19
AF213884.3-201ENST00000563833 SLC10A5Q5PT55 438 aa28.75■■■□□ 2.19
AF213884.3-201ENST00000563833 SLC51AQ86UW1 340 aa28.75■■■□□ 2.19
AF213884.3-201ENST00000563833 SYNE4Q8N205 404 aa28.74■■■□□ 2.19
AF213884.3-201ENST00000563833 PLBD2Q8NHP8 589 aa28.74■■■□□ 2.19
AF213884.3-201ENST00000563833 PPEF1O14829 653 aaPredicted RBP28.73■■■□□ 2.19
AF213884.3-201ENST00000563833 CC2D2BQ6DHV5 1058 aa28.73■■■□□ 2.19
AF213884.3-201ENST00000563833 ZNF428Q96B54 188 aa28.73■■■□□ 2.19
AF213884.3-201ENST00000563833 HYPKQ9NX55 129 aa28.73■■■□□ 2.19
AF213884.3-201ENST00000563833 LAMB2P55268 1798 aa28.73■■■□□ 2.19
AF213884.3-201ENST00000563833 ELL2O00472 640 aaPredicted RBP28.72■■■□□ 2.19
AF213884.3-201ENST00000563833 IARSP41252 1262 aaKnown RBP28.72■■■□□ 2.19
AF213884.3-201ENST00000563833 PSMD1Q99460 953 aa28.72■■■□□ 2.19
AF213884.3-201ENST00000563833 TRMT112Q9UI30 125 aaKnown RBP28.72■■■□□ 2.19
AF213884.3-201ENST00000563833 ZNF541Q9H0D2 1346 aa28.71■■■□□ 2.19
AF213884.3-201ENST00000563833 TCERG1O14776 1098 aaKnown RBP28.71■■■□□ 2.19
AF213884.3-201ENST00000563833 HCLS1P14317 486 aaPredicted RBP28.71■■■□□ 2.19
AF213884.3-201ENST00000563833 ANKRD13DQ6ZTN6 518 aa28.71■■■□□ 2.19
AF213884.3-201ENST00000563833 SH3TC1Q8TE82 1336 aa28.7■■■□□ 2.19
AF213884.3-201ENST00000563833 MRS2Q9HD23 443 aa28.7■■■□□ 2.18
AF213884.3-201ENST00000563833 ANP32CO43423 234 aa28.69■■■□□ 2.18
AF213884.3-201ENST00000563833 HTRA3P83110 453 aa28.69■■■□□ 2.18
AF213884.3-201ENST00000563833 ABCC4O15439 1325 aa28.69■■■□□ 2.18
AF213884.3-201ENST00000563833 C8orf58Q8NAV2 365 aa28.68■■■□□ 2.18
AF213884.3-201ENST00000563833 ATP5J2-PTCD1G3V325 749 aa28.67■■■□□ 2.18
AF213884.3-201ENST00000563833 ISCA1Q9BUE6 129 aa28.67■■■□□ 2.18
AF213884.3-201ENST00000563833 L3MBTL3Q96JM7 780 aaPredicted RBP28.66■■■□□ 2.18
AF213884.3-201ENST00000563833 COL4A5P29400 1685 aa28.66■■■□□ 2.18
AF213884.3-201ENST00000563833 GRIPAP1Q4V328 841 aa28.65■■■□□ 2.18
AF213884.3-201ENST00000563833 DNAJC5GQ8N7S2 189 aa28.65■■■□□ 2.18
AF213884.3-201ENST00000563833 DDX60Q8IY21 1712 aaKnown RBP28.64■■■□□ 2.18
AF213884.3-201ENST00000563833 FZD9O00144 591 aa28.64■■■□□ 2.18
AF213884.3-201ENST00000563833 GOLGA2Q08379 1002 aa28.64■■■□□ 2.18
AF213884.3-201ENST00000563833 JDP2Q8WYK2 163 aa28.64■■■□□ 2.18
AF213884.3-201ENST00000563833 TSR2Q969E8 191 aaKnown RBP28.64■■■□□ 2.18
AF213884.3-201ENST00000563833 PHAXQ9H814 394 aaKnown RBP28.64■■■□□ 2.18
AF213884.3-201ENST00000563833 ATP6V0A2Q9Y487 856 aa28.64■■■□□ 2.18
AF213884.3-201ENST00000563833 SCN4AP35499 1836 aa28.64■■■□□ 2.17
AF213884.3-201ENST00000563833 IQCA1LA6NCM1 817 aa28.63■■■□□ 2.17
AF213884.3-201ENST00000563833 CCDC27Q2M243 656 aa28.63■■■□□ 2.17
AF213884.3-201ENST00000563833 POTEIP0CG38 1075 aa28.62■■■□□ 2.17
AF213884.3-201ENST00000563833 POTEJP0CG39 1038 aa28.62■■■□□ 2.17
AF213884.3-201ENST00000563833 RIC3Q7Z5B4 369 aa28.62■■■□□ 2.17
AF213884.3-201ENST00000563833 WWC1Q8IX03 1113 aa28.62■■■□□ 2.17
AF213884.3-201ENST00000563833 TSPYL6Q8N831 410 aa28.62■■■□□ 2.17
AF213884.3-201ENST00000563833 FAM89AQ96GI7 184 aa28.62■■■□□ 2.17
AF213884.3-201ENST00000563833 TMX4Q9H1E5 349 aaPredicted RBP28.62■■■□□ 2.17
AF213884.3-201ENST00000563833 DDX46Q7L014 1031 aaKnown RBP28.61■■■□□ 2.17
AF213884.3-201ENST00000563833 LARGE2Q8N3Y3 721 aa28.61■■■□□ 2.17
AF213884.3-201ENST00000563833 TAF1P21675 1872 aa28.6■■■□□ 2.17
AF213884.3-201ENST00000563833 TAF1DQ9H5J8 278 aaPredicted RBP28.6■■■□□ 2.17
AF213884.3-201ENST00000563833 BBOX1O75936 387 aa28.59■■■□□ 2.17
AF213884.3-201ENST00000563833 TRIM28Q13263 835 aaKnown RBP28.59■■■□□ 2.17
AF213884.3-201ENST00000563833 GRAPQ13588 217 aa28.59■■■□□ 2.17
AF213884.3-201ENST00000563833 RTL5Q5HYW3 569 aaPredicted RBP28.59■■■□□ 2.17
AF213884.3-201ENST00000563833 CCDC30Q5VVM6 783 aa28.59■■■□□ 2.17
AF213884.3-201ENST00000563833 CHADLQ6NUI6 762 aa28.59■■■□□ 2.17
AF213884.3-201ENST00000563833 GRAPLQ8TC17 118 aaPredicted RBP28.59■■■□□ 2.17
AF213884.3-201ENST00000563833 PPIP5K2O43314 1243 aa28.57■■■□□ 2.16
AF213884.3-201ENST00000563833 EIF6P56537 245 aaKnown RBP28.57■■■□□ 2.16
AF213884.3-201ENST00000563833 GPC2Q8N158 579 aa28.57■■■□□ 2.16
AF213884.3-201ENST00000563833 MYD88Q99836 296 aa28.57■■■□□ 2.16
AF213884.3-201ENST00000563833 HACL1Q9UJ83 578 aa28.57■■■□□ 2.16
AF213884.3-201ENST00000563833 AOC3Q16853 763 aa28.56■■■□□ 2.16
AF213884.3-201ENST00000563833 SP8Q8IXZ3 490 aa28.56■■■□□ 2.16
AF213884.3-201ENST00000563833 NIM1KQ8IY84 436 aa28.56■■■□□ 2.16
AF213884.3-201ENST00000563833 KLRG1Q96E93 195 aa28.56■■■□□ 2.16
AF213884.3-201ENST00000563833 CHMP4AQ9BY43 222 aa28.56■■■□□ 2.16
AF213884.3-201ENST00000563833 DPP8Q6V1X1 898 aaPredicted RBP28.55■■■□□ 2.16
AF213884.3-201ENST00000563833 GJA3Q9Y6H8 435 aa28.55■■■□□ 2.16
AF213884.3-201ENST00000563833 IL16Q14005 1332 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms