RNA–Protein interactions for RNA: ENST00000562707.5

CMTM3-205, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CMTM3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-205ENST00000562707 SUSD4Q5VX71 490 aa21.87■■□□□ 1.09
CMTM3-205ENST00000562707 RBM17Q96I25 401 aaKnown RBP21.87■■□□□ 1.09
CMTM3-205ENST00000562707 PCNTO95613 3336 aa21.87■■□□□ 1.09
CMTM3-205ENST00000562707 CNTROBQ8N137 903 aa21.86■■□□□ 1.09
CMTM3-205ENST00000562707 GJA3Q9Y6H8 435 aa21.86■■□□□ 1.09
CMTM3-205ENST00000562707 IBTKQ9P2D0 1353 aaPredicted RBP21.86■■□□□ 1.09
CMTM3-205ENST00000562707 ERBB4Q15303 1308 aa21.85■■□□□ 1.09
CMTM3-205ENST00000562707 GIGYF2Q6Y7W6 1299 aaKnown RBP21.85■■□□□ 1.09
CMTM3-205ENST00000562707 PPP1R42Q7Z4L9 355 aa21.85■■□□□ 1.09
CMTM3-205ENST00000562707 ZNF34Q8IZ26 560 aa21.85■■□□□ 1.09
CMTM3-205ENST00000562707 AIDAQ96BJ3 306 aa21.85■■□□□ 1.09
CMTM3-205ENST00000562707 CRAMP1Q96RY5 1269 aa21.85■■□□□ 1.09
CMTM3-205ENST00000562707 TMX4Q9H1E5 349 aaPredicted RBP21.85■■□□□ 1.09
CMTM3-205ENST00000562707 UBN2Q6ZU65 1347 aa21.84■■□□□ 1.09
CMTM3-205ENST00000562707 LMOD1P29536 600 aaPredicted RBP21.84■■□□□ 1.09
CMTM3-205ENST00000562707 VEGFBP49765 207 aa21.84■■□□□ 1.09
CMTM3-205ENST00000562707 LARGE2Q8N3Y3 721 aa21.84■■□□□ 1.09
CMTM3-205ENST00000562707 TSPYL4Q9UJ04 414 aa21.84■■□□□ 1.09
CMTM3-205ENST00000562707 CACNA1SQ13698 1873 aa21.83■■□□□ 1.09
CMTM3-205ENST00000562707 PPEF1O14829 653 aaPredicted RBP21.83■■□□□ 1.09
CMTM3-205ENST00000562707 PARP10Q53GL7 1025 aa21.83■■□□□ 1.09
CMTM3-205ENST00000562707 MAP1SQ66K74 1059 aaPredicted RBP21.83■■□□□ 1.09
CMTM3-205ENST00000562707 RIC1Q4ADV7 1423 aa21.82■■□□□ 1.08
CMTM3-205ENST00000562707 TCERG1O14776 1098 aaKnown RBP21.82■■□□□ 1.08
CMTM3-205ENST00000562707 FOXN1O15353 648 aa21.82■■□□□ 1.08
CMTM3-205ENST00000562707 NTSR2O95665 410 aa21.82■■□□□ 1.08
CMTM3-205ENST00000562707 NLRP3Q96P20 1036 aa21.82■■□□□ 1.08
CMTM3-205ENST00000562707 SCN4AP35499 1836 aa21.82■■□□□ 1.08
CMTM3-205ENST00000562707 EIF2S2P20042 333 aaKnown RBP21.81■■□□□ 1.08
CMTM3-205ENST00000562707 DEFB115Q30KQ5 88 aa21.81■■□□□ 1.08
CMTM3-205ENST00000562707 SNED1Q8TER0 1413 aa21.8■■□□□ 1.08
CMTM3-205ENST00000562707 CTCFP49711 727 aaPredicted RBP21.8■■□□□ 1.08
CMTM3-205ENST00000562707 PRDM10Q9NQV6 1147 aa21.8■■□□□ 1.08
CMTM3-205ENST00000562707 RIPK4P57078 832 aa21.79■■□□□ 1.08
CMTM3-205ENST00000562707 NIM1KQ8IY84 436 aa21.79■■□□□ 1.08
CMTM3-205ENST00000562707 UTP14AQ9BVJ6 771 aaKnown RBP21.79■■□□□ 1.08
CMTM3-205ENST00000562707 RASSF10A6NK89 507 aa21.78■■□□□ 1.08
CMTM3-205ENST00000562707 SLC10A5Q5PT55 438 aa21.78■■□□□ 1.08
CMTM3-205ENST00000562707 VPS33BQ9H267 617 aa21.78■■□□□ 1.08
CMTM3-205ENST00000562707 BABAM1Q9NWV8 329 aa21.78■■□□□ 1.08
CMTM3-205ENST00000562707 ABT1Q9ULW3 272 aaKnown RBP21.78■■□□□ 1.08
CMTM3-205ENST00000562707 LAMB4A4D0S4 1761 aa21.78■■□□□ 1.08
CMTM3-205ENST00000562707 PPIP5K2O43314 1243 aa21.77■■□□□ 1.08
CMTM3-205ENST00000562707 EPS15P42566 896 aa21.77■■□□□ 1.08
CMTM3-205ENST00000562707 PDIA6Q15084 440 aa21.77■■□□□ 1.08
CMTM3-205ENST00000562707 C3orf67Q6ZVT6 689 aa21.77■■□□□ 1.08
CMTM3-205ENST00000562707 DDX21Q9NR30 783 aaKnown RBP eCLIP21.77■■□□□ 1.08
CMTM3-205ENST00000562707 ATP6V0A2Q9Y487 856 aa21.77■■□□□ 1.08
CMTM3-205ENST00000562707 SCNN1DP51172 638 aa21.76■■□□□ 1.07
CMTM3-205ENST00000562707 LMOD3Q0VAK6 560 aa21.76■■□□□ 1.07
CMTM3-205ENST00000562707 USP50Q70EL3 339 aaPredicted RBP21.76■■□□□ 1.07
CMTM3-205ENST00000562707 SUPT20HQ8NEM7 779 aa21.76■■□□□ 1.07
CMTM3-205ENST00000562707 WBP1LQ9NX94 342 aa21.76■■□□□ 1.07
CMTM3-205ENST00000562707 KDM3BQ7LBC6 1761 aa21.75■■□□□ 1.07
CMTM3-205ENST00000562707 HSP90AB3PQ58FF7 597 aa21.75■■□□□ 1.07
CMTM3-205ENST00000562707 LRP10Q7Z4F1 713 aa21.75■■□□□ 1.07
CMTM3-205ENST00000562707 BBOX1O75936 387 aa21.74■■□□□ 1.07
CMTM3-205ENST00000562707 ANXA1P04083 346 aa21.74■■□□□ 1.07
CMTM3-205ENST00000562707 MAP2K1Q02750 393 aaPredicted RBP21.74■■□□□ 1.07
CMTM3-205ENST00000562707 AOC3Q16853 763 aa21.74■■□□□ 1.07
CMTM3-205ENST00000562707 WDR33Q9C0J8 1336 aaKnown RBP21.74■■□□□ 1.07
CMTM3-205ENST00000562707 AIMP1Q12904 312 aaKnown RBP21.73■■□□□ 1.07
CMTM3-205ENST00000562707 PROSER3Q2NL68 480 aa21.73■■□□□ 1.07
CMTM3-205ENST00000562707 COPS6Q7L5N1 327 aa21.73■■□□□ 1.07
CMTM3-205ENST00000562707 SLC51AQ86UW1 340 aa21.73■■□□□ 1.07
CMTM3-205ENST00000562707 TMPOP42166 694 aaKnown RBP21.72■■□□□ 1.07
CMTM3-205ENST00000562707 LBX1P52954 281 aa21.72■■□□□ 1.07
CMTM3-205ENST00000562707 RALBP1Q15311 655 aa21.72■■□□□ 1.07
CMTM3-205ENST00000562707 NECTIN2Q92692 538 aa21.72■■□□□ 1.07
CMTM3-205ENST00000562707 ZNRF3Q9ULT6 936 aa21.72■■□□□ 1.07
CMTM3-205ENST00000562707 COL4A5P29400 1685 aa21.72■■□□□ 1.07
CMTM3-205ENST00000562707 ADAMTSL1Q8N6G6 1762 aa21.71■■□□□ 1.07
CMTM3-205ENST00000562707 DPP8Q6V1X1 898 aaPredicted RBP21.71■■□□□ 1.07
CMTM3-205ENST00000562707 NLRP10Q86W26 655 aa21.71■■□□□ 1.07
CMTM3-205ENST00000562707 SP8Q8IXZ3 490 aa21.71■■□□□ 1.07
CMTM3-205ENST00000562707 XAGE3Q8WTP9 111 aa21.71■■□□□ 1.07
CMTM3-205ENST00000562707 ADARB2Q9NS39 739 aaKnown RBP21.71■■□□□ 1.07
CMTM3-205ENST00000562707 ABCC4O15439 1325 aa21.71■■□□□ 1.07
CMTM3-205ENST00000562707 HCLS1P14317 486 aaPredicted RBP21.7■■□□□ 1.06
CMTM3-205ENST00000562707 ECE1P42892 770 aa21.7■■□□□ 1.06
CMTM3-205ENST00000562707 CXCL9Q07325 125 aa21.7■■□□□ 1.06
CMTM3-205ENST00000562707 TCIRG1Q13488 830 aa21.7■■□□□ 1.06
CMTM3-205ENST00000562707 PAXIP1Q6ZW49 1069 aaPredicted RBP21.7■■□□□ 1.06
CMTM3-205ENST00000562707 DDX46Q7L014 1031 aaKnown RBP21.7■■□□□ 1.06
CMTM3-205ENST00000562707 MPNDQ8N594 471 aa21.7■■□□□ 1.06
CMTM3-205ENST00000562707 RTFDC1Q9BY42 306 aaPredicted RBP21.7■■□□□ 1.06
CMTM3-205ENST00000562707 GPRC5DQ9NZD1 345 aa21.7■■□□□ 1.06
CMTM3-205ENST00000562707 TRMT112Q9UI30 125 aaKnown RBP21.7■■□□□ 1.06
CMTM3-205ENST00000562707 NUP98P52948 1817 aa21.7■■□□□ 1.06
CMTM3-205ENST00000562707 FMR1Q06787 632 aaKnown RBP eCLIP21.69■■□□□ 1.06
CMTM3-205ENST00000562707 DLG5Q8TDM6 1919 aa21.68■■□□□ 1.06
CMTM3-205ENST00000562707 NEUROD2Q15784 382 aa21.68■■□□□ 1.06
CMTM3-205ENST00000562707 CAPNS2Q96L46 248 aa21.68■■□□□ 1.06
CMTM3-205ENST00000562707 SH3TC1Q8TE82 1336 aa21.67■■□□□ 1.06
CMTM3-205ENST00000562707 TRAF5O00463 557 aa21.67■■□□□ 1.06
CMTM3-205ENST00000562707 HSPA8P11142 646 aaKnown RBP21.67■■□□□ 1.06
CMTM3-205ENST00000562707 CIAPIN1Q6FI81 312 aa21.67■■□□□ 1.06
CMTM3-205ENST00000562707 BEGAINQ9BUH8 593 aa21.67■■□□□ 1.06
CMTM3-205ENST00000562707 GMPSP49915 693 aaPredicted RBP21.66■■□□□ 1.06
CMTM3-205ENST00000562707 KIAA2012Q0VF49 1180 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms