RNA–Protein interactions for RNA: ENST00000562310.1

COMMD4-205, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-205ENST00000562310 BICC1Q9H694 974 aaKnown RBP17.72■□□□□ 0.43
COMMD4-205ENST00000562310 HLFQ16534 295 aa17.71■□□□□ 0.43
COMMD4-205ENST00000562310 RABL6Q3YEC7 729 aaPredicted RBP17.71■□□□□ 0.43
COMMD4-205ENST00000562310 KAZALD1Q96I82 304 aa17.71■□□□□ 0.43
COMMD4-205ENST00000562310 TBC1D2BQ9UPU7 963 aa17.71■□□□□ 0.43
COMMD4-205ENST00000562310 UBR3Q6ZT12 1888 aa17.71■□□□□ 0.43
COMMD4-205ENST00000562310 CDHR2Q9BYE9 1310 aa17.71■□□□□ 0.42
COMMD4-205ENST00000562310 PDE4AP27815 886 aa17.7■□□□□ 0.42
COMMD4-205ENST00000562310 PARP10Q53GL7 1025 aa17.7■□□□□ 0.42
COMMD4-205ENST00000562310 CLEC4GQ6UXB4 293 aa17.7■□□□□ 0.42
COMMD4-205ENST00000562310 NLRP10Q86W26 655 aa17.7■□□□□ 0.42
COMMD4-205ENST00000562310 ZNF34Q8IZ26 560 aa17.7■□□□□ 0.42
COMMD4-205ENST00000562310 ZBTB38Q8NAP3 1195 aaPredicted RBP17.7■□□□□ 0.42
COMMD4-205ENST00000562310 NOP58Q9Y2X3 529 aaKnown RBP17.7■□□□□ 0.42
COMMD4-205ENST00000562310 GNPATO15228 680 aa17.69■□□□□ 0.42
COMMD4-205ENST00000562310 ERC1Q8IUD2 1116 aa17.69■□□□□ 0.42
COMMD4-205ENST00000562310 LRRCC1Q9C099 1032 aa17.69■□□□□ 0.42
COMMD4-205ENST00000562310 EXOC6BQ9Y2D4 811 aa17.69■□□□□ 0.42
COMMD4-205ENST00000562310 RTCBQ9Y3I0 505 aaKnown RBP17.69■□□□□ 0.42
COMMD4-205ENST00000562310 COL24A1Q17RW2 1714 aa17.69■□□□□ 0.42
COMMD4-205ENST00000562310 SURF6O75683 361 aaKnown RBP17.68■□□□□ 0.42
COMMD4-205ENST00000562310 ADRA2BP18089 450 aa17.68■□□□□ 0.42
COMMD4-205ENST00000562310 AK7Q96M32 723 aa17.68■□□□□ 0.42
COMMD4-205ENST00000562310 PLA2G12BQ9BX93 195 aa17.68■□□□□ 0.42
COMMD4-205ENST00000562310 HSP90B1P14625 803 aaKnown RBP17.67■□□□□ 0.42
COMMD4-205ENST00000562310 KCNQ4P56696 695 aa17.67■□□□□ 0.42
COMMD4-205ENST00000562310 KIF1BPQ96EK5 621 aa17.67■□□□□ 0.42
COMMD4-205ENST00000562310 PLSCR1O15162 318 aa17.66■□□□□ 0.42
COMMD4-205ENST00000562310 GPTP24298 496 aa17.66■□□□□ 0.42
COMMD4-205ENST00000562310 FAM161AQ3B820 660 aa17.66■□□□□ 0.42
COMMD4-205ENST00000562310 EPHA10Q5JZY3 1008 aa17.66■□□□□ 0.42
COMMD4-205ENST00000562310 TSHZ2Q9NRE2 1034 aa17.66■□□□□ 0.42
COMMD4-205ENST00000562310 NARFQ9UHQ1 456 aa17.66■□□□□ 0.42
COMMD4-205ENST00000562310 FOXO4P98177 505 aa17.65■□□□□ 0.42
COMMD4-205ENST00000562310 OS9Q13438 667 aaPredicted RBP17.65■□□□□ 0.42
COMMD4-205ENST00000562310 UBN2Q6ZU65 1347 aa17.65■□□□□ 0.42
COMMD4-205ENST00000562310 DDX60Q8IY21 1712 aaKnown RBP17.64■□□□□ 0.41
COMMD4-205ENST00000562310 APBB1O00213 710 aa17.64■□□□□ 0.41
COMMD4-205ENST00000562310 LMBR1LQ6UX01 489 aa17.64■□□□□ 0.41
COMMD4-205ENST00000562310 JARID2Q92833 1246 aaPredicted RBP17.64■□□□□ 0.41
COMMD4-205ENST00000562310 COPRSQ9NQ92 184 aa17.64■□□□□ 0.41
COMMD4-205ENST00000562310 LRRC4BQ9NT99 713 aa17.64■□□□□ 0.41
COMMD4-205ENST00000562310 TRMT112Q9UI30 125 aaKnown RBP17.64■□□□□ 0.41
COMMD4-205ENST00000562310 ZPR1O75312 459 aa17.63■□□□□ 0.41
COMMD4-205ENST00000562310 G3BP1Q13283 466 aaKnown RBP eCLIP17.63■□□□□ 0.412e-6■□□□□ 9.5
COMMD4-205ENST00000562310 TXNRD1Q16881 649 aa17.63■□□□□ 0.41
COMMD4-205ENST00000562310 RHPN1Q8TCX5 695 aa17.63■□□□□ 0.41
COMMD4-205ENST00000562310 UTP14AQ9BVJ6 771 aaKnown RBP17.63■□□□□ 0.41
COMMD4-205ENST00000562310 NIP7Q9Y221 180 aaKnown RBP eCLIP17.63■□□□□ 0.41
COMMD4-205ENST00000562310 SH3TC1Q8TE82 1336 aa17.63■□□□□ 0.41
COMMD4-205ENST00000562310 SSFA2P28290 1259 aa17.62■□□□□ 0.41
COMMD4-205ENST00000562310 RFX5P48382 616 aaPredicted RBP17.62■□□□□ 0.41
COMMD4-205ENST00000562310 BMP2KLQ5H9B9 411 aa17.62■□□□□ 0.41
COMMD4-205ENST00000562310 PLEKHM2Q8IWE5 1019 aa17.62■□□□□ 0.41
COMMD4-205ENST00000562310 FAM89AQ96GI7 184 aa17.62■□□□□ 0.41
COMMD4-205ENST00000562310 BACH2Q9BYV9 841 aa17.62■□□□□ 0.41
COMMD4-205ENST00000562310 USP42Q9H9J4 1324 aaKnown RBP17.62■□□□□ 0.41
COMMD4-205ENST00000562310 IRS4O14654 1257 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-205ENST00000562310 SMARCA5O60264 1052 aaPredicted RBP17.61■□□□□ 0.41
COMMD4-205ENST00000562310 APBA3O96018 575 aa17.61■□□□□ 0.41
COMMD4-205ENST00000562310 TRAPPC3LQ5T215 181 aa17.61■□□□□ 0.41
COMMD4-205ENST00000562310 CHMP3Q9Y3E7 222 aa17.61■□□□□ 0.41
COMMD4-205ENST00000562310 AOX1Q06278 1338 aa17.61■□□□□ 0.41
COMMD4-205ENST00000562310 TUBGCP6Q96RT7 1819 aa17.61■□□□□ 0.41
COMMD4-205ENST00000562310 PDE8AO60658 829 aa17.6■□□□□ 0.41
COMMD4-205ENST00000562310 RFC4P35249 363 aa17.6■□□□□ 0.41
COMMD4-205ENST00000562310 CTSWP56202 376 aa17.6■□□□□ 0.41
COMMD4-205ENST00000562310 RTL5Q5HYW3 569 aaPredicted RBP17.6■□□□□ 0.41
COMMD4-205ENST00000562310 SUSD4Q5VX71 490 aa17.6■□□□□ 0.41
COMMD4-205ENST00000562310 OSBPL3Q9H4L5 887 aa17.6■□□□□ 0.41
COMMD4-205ENST00000562310 FBXO3Q9UK99 471 aa17.6■□□□□ 0.41
COMMD4-205ENST00000562310 PA2G4Q9UQ80 394 aaKnown RBP17.6■□□□□ 0.41
COMMD4-205ENST00000562310 CASZ1Q86V15 1759 aa17.6■□□□□ 0.41
COMMD4-205ENST00000562310 LRP5O75197 1615 aa17.59■□□□□ 0.41
COMMD4-205ENST00000562310 SALL3Q9BXA9 1300 aa17.59■□□□□ 0.41
COMMD4-205ENST00000562310 NTSR2O95665 410 aa17.59■□□□□ 0.41
COMMD4-205ENST00000562310 CSF1RP07333 972 aa17.59■□□□□ 0.41
COMMD4-205ENST00000562310 PTPN12Q05209 780 aaKnown RBP17.59■□□□□ 0.41
COMMD4-205ENST00000562310 C8orf34Q49A92 452 aa17.59■□□□□ 0.41
COMMD4-205ENST00000562310 USPL1Q5W0Q7 1092 aa17.59■□□□□ 0.41
COMMD4-205ENST00000562310 CLASRPQ8N2M8 674 aaKnown RBP17.59■□□□□ 0.41
COMMD4-205ENST00000562310 ARHGEF1Q92888 912 aaKnown RBP17.59■□□□□ 0.41
COMMD4-205ENST00000562310 NYXQ9GZU5 481 aa17.59■□□□□ 0.41
COMMD4-205ENST00000562310 MX1P20591 662 aa17.58■□□□□ 0.4
COMMD4-205ENST00000562310 CCDC57Q2TAC2 916 aa17.58■□□□□ 0.4
COMMD4-205ENST00000562310 TTC22Q5TAA0 569 aa17.58■□□□□ 0.4
COMMD4-205ENST00000562310 BCL2L12Q9HB09 334 aa17.58■□□□□ 0.4
COMMD4-205ENST00000562310 STAP2Q9UGK3 403 aa17.58■□□□□ 0.4
COMMD4-205ENST00000562310 QSER1Q2KHR3 1735 aa17.58■□□□□ 0.4
COMMD4-205ENST00000562310 RTL9Q8NET4 1388 aa17.57■□□□□ 0.4
COMMD4-205ENST00000562310 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.57■□□□□ 0.4
COMMD4-205ENST00000562310 CIAO1O76071 339 aa17.57■□□□□ 0.4
COMMD4-205ENST00000562310 PDE1AP54750 535 aa17.57■□□□□ 0.4
COMMD4-205ENST00000562310 SRP68Q9UHB9 627 aaKnown RBP17.57■□□□□ 0.4
COMMD4-205ENST00000562310 SRCAPQ6ZRS2 3230 aa17.57■□□□□ 0.4
COMMD4-205ENST00000562310 PHF14O94880 888 aa17.56■□□□□ 0.4
COMMD4-205ENST00000562310 IFIT5Q13325 482 aaKnown RBP17.56■□□□□ 0.4
COMMD4-205ENST00000562310 C16orf71Q8IYS4 520 aaPredicted RBP17.56■□□□□ 0.4
COMMD4-205ENST00000562310 PROM2Q8N271 834 aa17.56■□□□□ 0.4
COMMD4-205ENST00000562310 OTUD7AQ8TE49 926 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms