RNA–Protein interactions for RNA: ENST00000561878.1

TMEM170A-202, Transcript of transmembrane protein 170A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM170A, Length 1,072 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-202ENST00000561878 COPS6Q7L5N1 327 aa30.54■■■□□ 2.48
TMEM170A-202ENST00000561878 SMC1BQ8NDV3 1235 aa30.54■■■□□ 2.48
TMEM170A-202ENST00000561878 CALD1Q05682 793 aaKnown RBP30.53■■■□□ 2.48
TMEM170A-202ENST00000561878 AIMP1Q12904 312 aaKnown RBP30.53■■■□□ 2.48
TMEM170A-202ENST00000561878 HDGFL1Q5TGJ6 251 aa30.53■■■□□ 2.48
TMEM170A-202ENST00000561878 XAGE3Q8WTP9 111 aa30.53■■■□□ 2.48
TMEM170A-202ENST00000561878 APAF1O14727 1248 aa30.52■■■□□ 2.48
TMEM170A-202ENST00000561878 UTP14AQ9BVJ6 771 aaKnown RBP30.52■■■□□ 2.48
TMEM170A-202ENST00000561878 RNF123Q5XPI4 1314 aa30.51■■■□□ 2.48
TMEM170A-202ENST00000561878 HOXA10P31260 410 aaPredicted RBP30.5■■■□□ 2.47
TMEM170A-202ENST00000561878 CC2D2BQ6DHV5 1058 aa30.5■■■□□ 2.47
TMEM170A-202ENST00000561878 RBM17Q96I25 401 aaKnown RBP30.5■■■□□ 2.47
TMEM170A-202ENST00000561878 CHPF2Q9P2E5 772 aa30.5■■■□□ 2.47
TMEM170A-202ENST00000561878 NLRP3Q96P20 1036 aa30.49■■■□□ 2.47
TMEM170A-202ENST00000561878 OLFM4Q6UX06 510 aa30.48■■■□□ 2.47
TMEM170A-202ENST00000561878 MBIPQ9NS73 344 aa30.48■■■□□ 2.47
TMEM170A-202ENST00000561878 DBF4Q9UBU7 674 aaPredicted RBP30.48■■■□□ 2.47
TMEM170A-202ENST00000561878 GNAI1P63096 354 aa30.47■■■□□ 2.47
TMEM170A-202ENST00000561878 GRIPAP1Q4V328 841 aa30.47■■■□□ 2.47
TMEM170A-202ENST00000561878 CRAMP1Q96RY5 1269 aa30.47■■■□□ 2.47
TMEM170A-202ENST00000561878 ZNF277Q9NRM2 450 aaPredicted RBP30.47■■■□□ 2.47
TMEM170A-202ENST00000561878 IFT57Q9NWB7 429 aa30.47■■■□□ 2.47
TMEM170A-202ENST00000561878 TCIRG1Q13488 830 aa30.46■■■□□ 2.47
TMEM170A-202ENST00000561878 DUSP27Q5VZP5 1158 aa30.46■■■□□ 2.47
TMEM170A-202ENST00000561878 ZNF853P0CG23 659 aa30.45■■■□□ 2.47
TMEM170A-202ENST00000561878 SLC10A5Q5PT55 438 aa30.45■■■□□ 2.47
TMEM170A-202ENST00000561878 PSMD1Q99460 953 aa30.45■■■□□ 2.47
TMEM170A-202ENST00000561878 POTECB2RU33 542 aa30.44■■■□□ 2.46
TMEM170A-202ENST00000561878 DDNO94850 711 aaPredicted RBP30.44■■■□□ 2.46
TMEM170A-202ENST00000561878 NLRP10Q86W26 655 aa30.44■■■□□ 2.46
TMEM170A-202ENST00000561878 SYNE4Q8N205 404 aa30.44■■■□□ 2.46
TMEM170A-202ENST00000561878 HYPKQ9NX55 129 aa30.44■■■□□ 2.46
TMEM170A-202ENST00000561878 PPEF1O14829 653 aaPredicted RBP30.43■■■□□ 2.46
TMEM170A-202ENST00000561878 IARSP41252 1262 aaKnown RBP30.43■■■□□ 2.46
TMEM170A-202ENST00000561878 PLBD2Q8NHP8 589 aa30.43■■■□□ 2.46
TMEM170A-202ENST00000561878 SNED1Q8TER0 1413 aa30.42■■■□□ 2.46
TMEM170A-202ENST00000561878 TMX4Q9H1E5 349 aaPredicted RBP30.42■■■□□ 2.46
TMEM170A-202ENST00000561878 TRMT112Q9UI30 125 aaKnown RBP30.42■■■□□ 2.46
TMEM170A-202ENST00000561878 IQCA1LA6NCM1 817 aa30.41■■■□□ 2.46
TMEM170A-202ENST00000561878 ANKRD13DQ6ZTN6 518 aa30.41■■■□□ 2.46
TMEM170A-202ENST00000561878 C3orf67Q6ZVT6 689 aa30.41■■■□□ 2.46
TMEM170A-202ENST00000561878 SH3TC1Q8TE82 1336 aa30.4■■■□□ 2.46
TMEM170A-202ENST00000561878 LAMB2P55268 1798 aa30.39■■■□□ 2.46
TMEM170A-202ENST00000561878 SCN4AP35499 1836 aa30.39■■■□□ 2.46
TMEM170A-202ENST00000561878 JDP2Q8WYK2 163 aa30.39■■■□□ 2.46
TMEM170A-202ENST00000561878 DNAJC5GQ8N7S2 189 aa30.38■■■□□ 2.45
TMEM170A-202ENST00000561878 L3MBTL3Q96JM7 780 aaPredicted RBP30.38■■■□□ 2.45
TMEM170A-202ENST00000561878 ZNF316A6NFI3 1004 aaPredicted RBP30.37■■■□□ 2.45
TMEM170A-202ENST00000561878 CHMP4AQ9BY43 222 aa30.37■■■□□ 2.45
TMEM170A-202ENST00000561878 CCDC184Q52MB2 194 aa30.36■■■□□ 2.45
TMEM170A-202ENST00000561878 ZNF541Q9H0D2 1346 aa30.36■■■□□ 2.45
TMEM170A-202ENST00000561878 FZD9O00144 591 aa30.35■■■□□ 2.45
TMEM170A-202ENST00000561878 TCERG1O14776 1098 aaKnown RBP30.35■■■□□ 2.45
TMEM170A-202ENST00000561878 HCLS1P14317 486 aaPredicted RBP30.35■■■□□ 2.45
TMEM170A-202ENST00000561878 ABCC4O15439 1325 aa30.35■■■□□ 2.45
TMEM170A-202ENST00000561878 ANP32CO43423 234 aa30.34■■■□□ 2.45
TMEM170A-202ENST00000561878 ISCA1Q9BUE6 129 aa30.34■■■□□ 2.45
TMEM170A-202ENST00000561878 ATP6V0A2Q9Y487 856 aa30.34■■■□□ 2.45
TMEM170A-202ENST00000561878 ELL2O00472 640 aaPredicted RBP30.33■■■□□ 2.45
TMEM170A-202ENST00000561878 GOLGA2Q08379 1002 aa30.33■■■□□ 2.45
TMEM170A-202ENST00000561878 DDX46Q7L014 1031 aaKnown RBP30.33■■■□□ 2.45
TMEM170A-202ENST00000561878 BBOX1O75936 387 aa30.32■■■□□ 2.44
TMEM170A-202ENST00000561878 HTRA3P83110 453 aa30.32■■■□□ 2.44
TMEM170A-202ENST00000561878 CHADLQ6NUI6 762 aa30.32■■■□□ 2.44
TMEM170A-202ENST00000561878 EIF6P56537 245 aaKnown RBP30.31■■■□□ 2.44
TMEM170A-202ENST00000561878 RIC3Q7Z5B4 369 aa30.31■■■□□ 2.44
TMEM170A-202ENST00000561878 LARGE2Q8N3Y3 721 aa30.31■■■□□ 2.44
TMEM170A-202ENST00000561878 KLRG1Q96E93 195 aa30.31■■■□□ 2.44
TMEM170A-202ENST00000561878 TAF1DQ9H5J8 278 aaPredicted RBP30.31■■■□□ 2.44
TMEM170A-202ENST00000561878 MRS2Q9HD23 443 aa30.31■■■□□ 2.44
TMEM170A-202ENST00000561878 ATP5J2-PTCD1G3V325 749 aa30.3■■■□□ 2.44
TMEM170A-202ENST00000561878 CCDC27Q2M243 656 aa30.3■■■□□ 2.44
TMEM170A-202ENST00000561878 GPC2Q8N158 579 aa30.3■■■□□ 2.44
TMEM170A-202ENST00000561878 HACL1Q9UJ83 578 aa30.3■■■□□ 2.44
TMEM170A-202ENST00000561878 DDX60Q8IY21 1712 aaKnown RBP30.3■■■□□ 2.44
TMEM170A-202ENST00000561878 CCDC30Q5VVM6 783 aa30.29■■■□□ 2.44
TMEM170A-202ENST00000561878 C8orf58Q8NAV2 365 aa30.29■■■□□ 2.44
TMEM170A-202ENST00000561878 SUPT20HQ8NEM7 779 aa30.29■■■□□ 2.44
TMEM170A-202ENST00000561878 VPS33BQ9H267 617 aa30.29■■■□□ 2.44
TMEM170A-202ENST00000561878 TRIM28Q13263 835 aaKnown RBP30.28■■■□□ 2.44
TMEM170A-202ENST00000561878 GRAPQ13588 217 aa30.28■■■□□ 2.44
TMEM170A-202ENST00000561878 LDHDQ86WU2 507 aa30.28■■■□□ 2.44
TMEM170A-202ENST00000561878 SP8Q8IXZ3 490 aa30.28■■■□□ 2.44
TMEM170A-202ENST00000561878 GRAPLQ8TC17 118 aaPredicted RBP30.28■■■□□ 2.44
TMEM170A-202ENST00000561878 TMC4Q7Z404 712 aa30.27■■■□□ 2.44
TMEM170A-202ENST00000561878 NIM1KQ8IY84 436 aa30.27■■■□□ 2.44
TMEM170A-202ENST00000561878 FAM89AQ96GI7 184 aa30.27■■■□□ 2.44
TMEM170A-202ENST00000561878 PHAXQ9H814 394 aaKnown RBP30.27■■■□□ 2.44
TMEM170A-202ENST00000561878 COL4A5P29400 1685 aa30.27■■■□□ 2.44
TMEM170A-202ENST00000561878 PPIP5K2O43314 1243 aa30.26■■■□□ 2.43
TMEM170A-202ENST00000561878 ZNF428Q96B54 188 aa30.26■■■□□ 2.43
TMEM170A-202ENST00000561878 DDX58O95786 925 aaKnown RBP30.25■■■□□ 2.43
TMEM170A-202ENST00000561878 POTEIP0CG38 1075 aa30.25■■■□□ 2.43
TMEM170A-202ENST00000561878 POTEJP0CG39 1038 aa30.25■■■□□ 2.43
TMEM170A-202ENST00000561878 NCBP3Q53F19 620 aaKnown RBP30.25■■■□□ 2.43
TMEM170A-202ENST00000561878 DPP8Q6V1X1 898 aaPredicted RBP30.25■■■□□ 2.43
TMEM170A-202ENST00000561878 SLC51AQ86UW1 340 aa30.25■■■□□ 2.43
TMEM170A-202ENST00000561878 WWC1Q8IX03 1113 aa30.25■■■□□ 2.43
TMEM170A-202ENST00000561878 EPHX2P34913 555 aa30.24■■■□□ 2.43
TMEM170A-202ENST00000561878 EAPPQ56P03 285 aaPredicted RBP30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms