RNA–Protein interactions for RNA: ENST00000561345.5

HOMER2-208, Transcript of homer scaffold protein 2, human

TSL 3

Gene HOMER2, Length 659 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HOMER2-208	ENST00000561345	PLBD2	Q8NHP8	589 aa		13.31	□□□□□ -0.28
HOMER2-208	ENST00000561345	HYPK	Q9NX55	129 aa		13.31	□□□□□ -0.28
HOMER2-208	ENST00000561345	CEP350	Q5VT06	3117 aa		13.3	□□□□□ -0.28
HOMER2-208	ENST00000561345	C8orf58	Q8NAV2	365 aa		13.3	□□□□□ -0.28
HOMER2-208	ENST00000561345	ZNF526	Q8TF50	670 aa	Predicted RBP	13.3	□□□□□ -0.28
HOMER2-208	ENST00000561345	CHMP4A	Q9BY43	222 aa		13.3	□□□□□ -0.28
HOMER2-208	ENST00000561345	DICER1	Q9UPY3	1922 aa	Known RBP	13.3	□□□□□ -0.28
HOMER2-208	ENST00000561345	AIMP1	Q12904	312 aa	Known RBP	13.29	□□□□□ -0.28
HOMER2-208	ENST00000561345	TRIM28	Q13263	835 aa	Known RBP	13.29	□□□□□ -0.28
HOMER2-208	ENST00000561345	CCDC93	Q567U6	631 aa		13.29	□□□□□ -0.28
HOMER2-208	ENST00000561345	ANKRD13D	Q6ZTN6	518 aa		13.29	□□□□□ -0.28
HOMER2-208	ENST00000561345	ISCA1	Q9BUE6	129 aa		13.29	□□□□□ -0.28
HOMER2-208	ENST00000561345	UTP14A	Q9BVJ6	771 aa	Known RBP	13.29	□□□□□ -0.28
HOMER2-208	ENST00000561345	TAOK3	Q9H2K8	898 aa		13.29	□□□□□ -0.28
HOMER2-208	ENST00000561345	TIAM2	Q8IVF5	1701 aa		13.29	□□□□□ -0.28
HOMER2-208	ENST00000561345	CACNA1S	Q13698	1873 aa		13.29	□□□□□ -0.28
HOMER2-208	ENST00000561345	GLTPD2	A6NH11	291 aa		13.28	□□□□□ -0.28
HOMER2-208	ENST00000561345	CRAMP1	Q96RY5	1269 aa		13.28	□□□□□ -0.28
HOMER2-208	ENST00000561345	NMRK2	Q9NPI5	230 aa		13.28	□□□□□ -0.28
HOMER2-208	ENST00000561345	KDM2B	Q8NHM5	1336 aa		13.28	□□□□□ -0.28
HOMER2-208	ENST00000561345	CCDC88A	Q3V6T2	1871 aa		13.27	□□□□□ -0.28
HOMER2-208	ENST00000561345	TOMM70	O94826	608 aa		13.27	□□□□□ -0.29
HOMER2-208	ENST00000561345	CC2D2B	Q6DHV5	1058 aa		13.27	□□□□□ -0.29
HOMER2-208	ENST00000561345	C3orf67	Q6ZVT6	689 aa		13.27	□□□□□ -0.29
HOMER2-208	ENST00000561345	WDR63	Q8IWG1	891 aa		13.27	□□□□□ -0.29
HOMER2-208	ENST00000561345	TSPYL6	Q8N831	410 aa		13.27	□□□□□ -0.29
HOMER2-208	ENST00000561345	ELL2	O00472	640 aa	Predicted RBP	13.26	□□□□□ -0.29
HOMER2-208	ENST00000561345	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
HOMER2-208	ENST00000561345	GRIPAP1	Q4V328	841 aa		13.26	□□□□□ -0.29
HOMER2-208	ENST00000561345	CCDC30	Q5VVM6	783 aa		13.26	□□□□□ -0.29
HOMER2-208	ENST00000561345	RTKN2	Q8IZC4	609 aa		13.26	□□□□□ -0.29
HOMER2-208	ENST00000561345	SH3TC1	Q8TE82	1336 aa		13.26	□□□□□ -0.29
HOMER2-208	ENST00000561345	NLRP3	Q96P20	1036 aa		13.26	□□□□□ -0.29
HOMER2-208	ENST00000561345	PSMD1	Q99460	953 aa		13.26	□□□□□ -0.29
HOMER2-208	ENST00000561345	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.26	□□□□□ -0.29
HOMER2-208	ENST00000561345	WDR90	Q96KV7	1748 aa		13.25	□□□□□ -0.29
HOMER2-208	ENST00000561345	RPGR	Q92834	1020 aa	Known RBP	13.25	□□□□□ -0.29
HOMER2-208	ENST00000561345	TSR2	Q969E8	191 aa	Known RBP	13.25	□□□□□ -0.29
HOMER2-208	ENST00000561345	PHAX	Q9H814	394 aa	Known RBP	13.25	□□□□□ -0.29
HOMER2-208	ENST00000561345	TRMT112	Q9UI30	125 aa	Known RBP	13.25	□□□□□ -0.29
HOMER2-208	ENST00000561345	LAMB2	P55268	1798 aa		13.25	□□□□□ -0.29
HOMER2-208	ENST00000561345	FANCI	Q9NVI1	1328 aa		13.24	□□□□□ -0.29
HOMER2-208	ENST00000561345	OLFM4	Q6UX06	510 aa		13.24	□□□□□ -0.29
HOMER2-208	ENST00000561345	SYNE4	Q8N205	404 aa		13.24	□□□□□ -0.29
HOMER2-208	ENST00000561345	RBM46	Q8TBY0	533 aa	Known RBP	13.24	□□□□□ -0.29
HOMER2-208	ENST00000561345	RBM17	Q96I25	401 aa	Known RBP	13.24	□□□□□ -0.29
HOMER2-208	ENST00000561345	DDX60	Q8IY21	1712 aa	Known RBP	13.24	□□□□□ -0.29
HOMER2-208	ENST00000561345	ABCC4	O15439	1325 aa		13.23	□□□□□ -0.29
HOMER2-208	ENST00000561345	ZNF521	Q96K83	1311 aa		13.23	□□□□□ -0.29
HOMER2-208	ENST00000561345	GOLGA2	Q08379	1002 aa		13.23	□□□□□ -0.29
HOMER2-208	ENST00000561345	TWISTNB	Q3B726	338 aa	Predicted RBP	13.23	□□□□□ -0.29
HOMER2-208	ENST00000561345	SENP3-EIF4A1	A0A087X0R7	540 aa		13.22	□□□□□ -0.29
HOMER2-208	ENST00000561345	POTEC	B2RU33	542 aa		13.22	□□□□□ -0.29
HOMER2-208	ENST00000561345	HCLS1	P14317	486 aa	Predicted RBP	13.22	□□□□□ -0.29
HOMER2-208	ENST00000561345	HSPA6	P17066	643 aa		13.22	□□□□□ -0.29
HOMER2-208	ENST00000561345	SF3B3	Q15393	1217 aa	Known RBP	13.22	□□□□□ -0.29
HOMER2-208	ENST00000561345	DPY19L2	Q6NUT2	758 aa		13.22	□□□□□ -0.29
HOMER2-208	ENST00000561345	CCDC191	Q8NCU4	936 aa		13.22	□□□□□ -0.29
HOMER2-208	ENST00000561345	RRAGC	Q9HB90	399 aa		13.22	□□□□□ -0.29
HOMER2-208	ENST00000561345	ATP6V0A2	Q9Y487	856 aa		13.22	□□□□□ -0.29
HOMER2-208	ENST00000561345	ATP5J2-PTCD1	G3V325	749 aa		13.21	□□□□□ -0.29
HOMER2-208	ENST00000561345	FZD9	O00144	591 aa		13.21	□□□□□ -0.29
HOMER2-208	ENST00000561345	PPEF1	O14829	653 aa	Predicted RBP	13.21	□□□□□ -0.29
HOMER2-208	ENST00000561345	BBOX1	O75936	387 aa		13.21	□□□□□ -0.29
HOMER2-208	ENST00000561345	DDX58	O95786	925 aa	Known RBP	13.21	□□□□□ -0.29
HOMER2-208	ENST00000561345	VEGFA	P15692	232 aa	Predicted RBP	13.21	□□□□□ -0.29
HOMER2-208	ENST00000561345	IARS	P41252	1262 aa	Known RBP	13.21	□□□□□ -0.29
HOMER2-208	ENST00000561345	RIC3	Q7Z5B4	369 aa		13.21	□□□□□ -0.29
HOMER2-208	ENST00000561345	FAM9B	Q8IZU0	186 aa		13.21	□□□□□ -0.29
HOMER2-208	ENST00000561345	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	13.21	□□□□□ -0.29
HOMER2-208	ENST00000561345	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.21	□□□□□ -0.29
HOMER2-208	ENST00000561345	METTL22	Q9BUU2	404 aa	Predicted RBP	13.21	□□□□□ -0.29
HOMER2-208	ENST00000561345	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.21	□□□□□ -0.29
HOMER2-208	ENST00000561345	LRRC37A	A6NMS7	1700 aa		13.2	□□□□□ -0.3
HOMER2-208	ENST00000561345	VAMP4	O75379	141 aa		13.2	□□□□□ -0.3
HOMER2-208	ENST00000561345	FSTL1	Q12841	308 aa		13.2	□□□□□ -0.3
HOMER2-208	ENST00000561345	KSR2	Q6VAB6	950 aa		13.2	□□□□□ -0.3
HOMER2-208	ENST00000561345	FAM89A	Q96GI7	184 aa		13.2	□□□□□ -0.3
HOMER2-208	ENST00000561345	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.2	□□□□□ -0.3
HOMER2-208	ENST00000561345	VPS33B	Q9H267	617 aa		13.2	□□□□□ -0.3
HOMER2-208	ENST00000561345	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.2	□□□□□ -0.3
HOMER2-208	ENST00000561345	CACNA1F	O60840	1977 aa		13.2	□□□□□ -0.3
HOMER2-208	ENST00000561345	COL4A5	P29400	1685 aa		13.19	□□□□□ -0.3
HOMER2-208	ENST00000561345	PCCA	P05165	728 aa	Predicted RBP	13.19	□□□□□ -0.3
HOMER2-208	ENST00000561345	GRAP	Q13588	217 aa		13.19	□□□□□ -0.3
HOMER2-208	ENST00000561345	TMC4	Q7Z404	712 aa		13.19	□□□□□ -0.3
HOMER2-208	ENST00000561345	SLC51A	Q86UW1	340 aa		13.19	□□□□□ -0.3
HOMER2-208	ENST00000561345	SP8	Q8IXZ3	490 aa		13.19	□□□□□ -0.3
HOMER2-208	ENST00000561345	GRAPL	Q8TC17	118 aa	Predicted RBP	13.19	□□□□□ -0.3
HOMER2-208	ENST00000561345	STK31	Q9BXU1	1019 aa		13.19	□□□□□ -0.3
HOMER2-208	ENST00000561345	PI4KAP2	A4QPH2	592 aa		13.18	□□□□□ -0.3
HOMER2-208	ENST00000561345	IRS4	O14654	1257 aa	Predicted RBP	13.18	□□□□□ -0.3
HOMER2-208	ENST00000561345	IGKV5-2	P06315	115 aa		13.18	□□□□□ -0.3
HOMER2-208	ENST00000561345	DDX46	Q7L014	1031 aa	Known RBP	13.18	□□□□□ -0.3
HOMER2-208	ENST00000561345	PI4KAP1	Q8N8J0	262 aa		13.18	□□□□□ -0.3
HOMER2-208	ENST00000561345	MYD88	Q99836	296 aa		13.18	□□□□□ -0.3
HOMER2-208	ENST00000561345	MAP3K2	Q9Y2U5	619 aa		13.18	□□□□□ -0.3
HOMER2-208	ENST00000561345	CDHR2	Q9BYE9	1310 aa		13.17	□□□□□ -0.3
HOMER2-208	ENST00000561345	DUOX1	Q9NRD9	1551 aa		13.17	□□□□□ -0.3
HOMER2-208	ENST00000561345	DDN	O94850	711 aa	Predicted RBP	13.17	□□□□□ -0.3

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