RNA–Protein interactions for RNA: ENST00000560954.5

USP8-214, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-214ENST00000560954 PPP1R42Q7Z4L9 355 aa16.04■□□□□ 0.16
USP8-214ENST00000560954 TRIM28Q13263 835 aaKnown RBP16.03■□□□□ 0.16
USP8-214ENST00000560954 SLC10A5Q5PT55 438 aa16.03■□□□□ 0.16
USP8-214ENST00000560954 PRPF40BQ6NWY9 871 aaKnown RBP16.03■□□□□ 0.16
USP8-214ENST00000560954 NLRP10Q86W26 655 aa16.03■□□□□ 0.16
USP8-214ENST00000560954 ISCA1Q9BUE6 129 aa16.03■□□□□ 0.16
USP8-214ENST00000560954 NFKBIEO00221 500 aa16.02■□□□□ 0.16
USP8-214ENST00000560954 HOXA10P31260 410 aaPredicted RBP16.02■□□□□ 0.16
USP8-214ENST00000560954 TWISTNBQ3B726 338 aaPredicted RBP16.02■□□□□ 0.16
USP8-214ENST00000560954 ERFEQ4G0M1 354 aa16.02■□□□□ 0.16
USP8-214ENST00000560954 ANKRD13DQ6ZTN6 518 aa16.02■□□□□ 0.16
USP8-214ENST00000560954 ARHGAP27Q6ZUM4 889 aa16.02■□□□□ 0.16
USP8-214ENST00000560954 NUTM1Q86Y26 1132 aa16.02■□□□□ 0.16
USP8-214ENST00000560954 C7orf43Q8WVR3 580 aa16.02■□□□□ 0.16
USP8-214ENST00000560954 AIMP1Q12904 312 aaKnown RBP16.01■□□□□ 0.15
USP8-214ENST00000560954 SOGA3Q5TF21 947 aa16.01■□□□□ 0.15
USP8-214ENST00000560954 ZNF622Q969S3 477 aaKnown RBP eCLIP16.01■□□□□ 0.151e-9■■■■□ 24.8
USP8-214ENST00000560954 UTP14AQ9BVJ6 771 aaKnown RBP16.01■□□□□ 0.15
USP8-214ENST00000560954 LTBP1Q14766 1721 aa16.01■□□□□ 0.15
USP8-214ENST00000560954 TAF1P21675 1872 aa16.01■□□□□ 0.15
USP8-214ENST00000560954 WDR90Q96KV7 1748 aa16■□□□□ 0.15
USP8-214ENST00000560954 ELL2O00472 640 aaPredicted RBP16■□□□□ 0.15
USP8-214ENST00000560954 PHAXQ9H814 394 aaKnown RBP16■□□□□ 0.15
USP8-214ENST00000560954 SPINK5Q9NQ38 1064 aaPredicted RBP16■□□□□ 0.15
USP8-214ENST00000560954 FAM177BA6PVY3 158 aa15.99■□□□□ 0.15
USP8-214ENST00000560954 PRELPP51888 382 aa15.99■□□□□ 0.15
USP8-214ENST00000560954 GOLGA2Q08379 1002 aa15.99■□□□□ 0.15
USP8-214ENST00000560954 SH3TC1Q8TE82 1336 aa15.98■□□□□ 0.15
USP8-214ENST00000560954 SENP3-EIF4A1A0A087X0R7 540 aa15.98■□□□□ 0.15
USP8-214ENST00000560954 VAMP4O75379 141 aa15.98■□□□□ 0.15
USP8-214ENST00000560954 GTF2E1P29083 439 aaPredicted RBP15.98■□□□□ 0.15
USP8-214ENST00000560954 ALDH1B1P30837 517 aa15.98■□□□□ 0.15
USP8-214ENST00000560954 RASSF7Q02833 373 aa15.98■□□□□ 0.15
USP8-214ENST00000560954 C9orf131Q5VYM1 1079 aa15.98■□□□□ 0.15
USP8-214ENST00000560954 CRAMP1Q96RY5 1269 aa15.98■□□□□ 0.15
USP8-214ENST00000560954 MYH16Q9H6N6 1097 aa15.98■□□□□ 0.15
USP8-214ENST00000560954 C21orf2O43822 256 aa15.97■□□□□ 0.15
USP8-214ENST00000560954 LMNB1P20700 586 aa15.97■□□□□ 0.15
USP8-214ENST00000560954 C3orf67Q6ZVT6 689 aa15.97■□□□□ 0.15
USP8-214ENST00000560954 STK31Q9BXU1 1019 aa15.97■□□□□ 0.15
USP8-214ENST00000560954 COL4A1P02462 1669 aa15.97■□□□□ 0.15
USP8-214ENST00000560954 DUOX1Q9NRD9 1551 aa15.96■□□□□ 0.15
USP8-214ENST00000560954 DDX58O95786 925 aaKnown RBP15.96■□□□□ 0.15
USP8-214ENST00000560954 CCDC93Q567U6 631 aa15.96■□□□□ 0.15
USP8-214ENST00000560954 RNF181Q9P0P0 153 aa15.96■□□□□ 0.15
USP8-214ENST00000560954 EXOSC9Q06265 439 aaKnown RBP15.95■□□□□ 0.14
USP8-214ENST00000560954 RIC3Q7Z5B4 369 aa15.95■□□□□ 0.14
USP8-214ENST00000560954 CCDC191Q8NCU4 936 aa15.95■□□□□ 0.14
USP8-214ENST00000560954 NLRP3Q96P20 1036 aa15.95■□□□□ 0.14
USP8-214ENST00000560954 METTL22Q9BUU2 404 aaPredicted RBP15.95■□□□□ 0.14
USP8-214ENST00000560954 TAOK3Q9H2K8 898 aa15.95■□□□□ 0.14
USP8-214ENST00000560954 TRMT112Q9UI30 125 aaKnown RBP15.95■□□□□ 0.14
USP8-214ENST00000560954 GRIPAP1Q4V328 841 aa15.94■□□□□ 0.14
USP8-214ENST00000560954 CC2D2BQ6DHV5 1058 aa15.94■□□□□ 0.14
USP8-214ENST00000560954 KSR2Q6VAB6 950 aa15.94■□□□□ 0.14
USP8-214ENST00000560954 RPGRQ92834 1020 aaKnown RBP15.94■□□□□ 0.14
USP8-214ENST00000560954 SALL2Q9Y467 1007 aaPredicted RBP15.94■□□□□ 0.14
USP8-214ENST00000560954 SCN4AP35499 1836 aa15.94■□□□□ 0.14
USP8-214ENST00000560954 ATP5J2-PTCD1G3V325 749 aa15.93■□□□□ 0.14
USP8-214ENST00000560954 FLIIQ13045 1269 aa15.93■□□□□ 0.14
USP8-214ENST00000560954 ZBTB38Q8NAP3 1195 aaPredicted RBP15.93■□□□□ 0.14
USP8-214ENST00000560954 RBM17Q96I25 401 aaKnown RBP15.93■□□□□ 0.14
USP8-214ENST00000560954 PSMD1Q99460 953 aa15.93■□□□□ 0.14
USP8-214ENST00000560954 GPBP1L1Q9HC44 474 aaPredicted RBP15.93■□□□□ 0.14
USP8-214ENST00000560954 SPEF2Q9C093 1822 aa15.93■□□□□ 0.14
USP8-214ENST00000560954 ABCC4O15439 1325 aa15.93■□□□□ 0.14
USP8-214ENST00000560954 CDHR2Q9BYE9 1310 aa15.93■□□□□ 0.14
USP8-214ENST00000560954 A0A1B0GUL6 1792 aa15.92■□□□□ 0.14
USP8-214ENST00000560954 COL4A5P29400 1685 aa15.92■□□□□ 0.14
USP8-214ENST00000560954 E9PSI1 815 aa15.92■□□□□ 0.14
USP8-214ENST00000560954 PCCAP05165 728 aaPredicted RBP15.92■□□□□ 0.14
USP8-214ENST00000560954 FKBP4Q02790 459 aaKnown RBP eCLIP15.92■□□□□ 0.14
USP8-214ENST00000560954 SF3B3Q15393 1217 aaKnown RBP15.92■□□□□ 0.14
USP8-214ENST00000560954 G2E3Q7L622 706 aa15.92■□□□□ 0.14
USP8-214ENST00000560954 RTKN2Q8IZC4 609 aa15.92■□□□□ 0.14
USP8-214ENST00000560954 SYNE4Q8N205 404 aa15.92■□□□□ 0.14
USP8-214ENST00000560954 MAP3K2Q9Y2U5 619 aa15.92■□□□□ 0.14
USP8-214ENST00000560954 PI4KAP2A4QPH2 592 aa15.91■□□□□ 0.14
USP8-214ENST00000560954 KIF3CO14782 793 aa15.91■□□□□ 0.14
USP8-214ENST00000560954 SLC4A2P04920 1241 aa15.91■□□□□ 0.14
USP8-214ENST00000560954 IGKV5-2P06315 115 aa15.91■□□□□ 0.14
USP8-214ENST00000560954 HCLS1P14317 486 aaPredicted RBP15.91■□□□□ 0.14
USP8-214ENST00000560954 DIEXFQ68CQ4 756 aaKnown RBP15.91■□□□□ 0.14
USP8-214ENST00000560954 TRMT2AQ8IZ69 625 aaKnown RBP15.91■□□□□ 0.14
USP8-214ENST00000560954 PI4KAP1Q8N8J0 262 aa15.91■□□□□ 0.14
USP8-214ENST00000560954 MYD88Q99836 296 aa15.91■□□□□ 0.14
USP8-214ENST00000560954 PPEF1O14829 653 aaPredicted RBP15.9■□□□□ 0.14
USP8-214ENST00000560954 SLFN5Q08AF3 891 aa15.9■□□□□ 0.14
USP8-214ENST00000560954 CWC25Q9NXE8 425 aaPredicted RBP15.9■□□□□ 0.14
USP8-214ENST00000560954 KDM2BQ8NHM5 1336 aa15.9■□□□□ 0.14
USP8-214ENST00000560954 PSME4Q14997 1843 aa15.89■□□□□ 0.13
USP8-214ENST00000560954 HSP90B1P14625 803 aaKnown RBP15.89■□□□□ 0.13
USP8-214ENST00000560954 GRAPQ13588 217 aa15.89■□□□□ 0.13
USP8-214ENST00000560954 TMC4Q7Z404 712 aa15.89■□□□□ 0.13
USP8-214ENST00000560954 GRAPLQ8TC17 118 aaPredicted RBP15.89■□□□□ 0.13
USP8-214ENST00000560954 ZNF428Q96B54 188 aa15.89■□□□□ 0.13
USP8-214ENST00000560954 FAM89AQ96GI7 184 aa15.89■□□□□ 0.13
USP8-214ENST00000560954 ATP6V0A2Q9Y487 856 aa15.89■□□□□ 0.13
USP8-214ENST00000560954 ADAMTSL1Q8N6G6 1762 aa15.89■□□□□ 0.13
USP8-214ENST00000560954 RTL9Q8NET4 1388 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms