RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 CTAGE8P0CG41 777 aa15.81■□□□□ 0.12
CSPG4P12-202ENST00000559989 CTAGE6Q86UF2 777 aa15.81■□□□□ 0.12
CSPG4P12-202ENST00000559989 CTAGE4Q8IX94 777 aa15.81■□□□□ 0.12
CSPG4P12-202ENST00000559989 NLRP5P59047 1200 aa15.8■□□□□ 0.12
CSPG4P12-202ENST00000559989 GPRASP1Q5JY77 1395 aa15.8■□□□□ 0.12
CSPG4P12-202ENST00000559989 CCDC170Q8IYT3 715 aa15.8■□□□□ 0.12
CSPG4P12-202ENST00000559989 TSPYL2Q9H2G4 693 aaPredicted RBP15.8■□□□□ 0.12
CSPG4P12-202ENST00000559989 RBM28Q9NW13 759 aaKnown RBP15.8■□□□□ 0.12
CSPG4P12-202ENST00000559989 NEDD9Q14511 834 aa15.8■□□□□ 0.12
CSPG4P12-202ENST00000559989 C10orf67Q8IYJ2 551 aa15.8■□□□□ 0.12
CSPG4P12-202ENST00000559989 EXOC1Q9NV70 894 aa15.8■□□□□ 0.12
CSPG4P12-202ENST00000559989 SLC12A7Q9Y666 1083 aa15.8■□□□□ 0.12
CSPG4P12-202ENST00000559989 TRPC3Q13507 836 aa15.8■□□□□ 0.12
CSPG4P12-202ENST00000559989 CCDC194A0A1B0GVG4 234 aa15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 B4GALNT4Q76KP1 1039 aa15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 AFAP1L2Q8N4X5 818 aa15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 ADCY5O95622 1261 aa15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 CAVIN2O95810 425 aa15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 HDGFL1Q5TGJ6 251 aa15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 IQCA1Q86XH1 822 aa15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 FAM169AQ9Y6X4 670 aa15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 GOLGA1Q92805 767 aa15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 CEP126Q9P2H0 1117 aa15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 SCAPERQ9BY12 1400 aa15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 ERCC5P28715 1186 aaPredicted RBP15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 HVCN1Q96D96 273 aa15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 TATP17735 454 aaPredicted RBP15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 MCM6Q14566 821 aa15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 PHLDB2Q86SQ0 1253 aa15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 ZNF444Q8N0Y2 327 aaPredicted RBP15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 SLC4A2P04920 1241 aa15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 ZMAT2Q96NC0 199 aaKnown RBP15.79■□□□□ 0.12
CSPG4P12-202ENST00000559989 CA8P35219 290 aa15.78■□□□□ 0.12
CSPG4P12-202ENST00000559989 ZBTB17Q13105 803 aa15.78■□□□□ 0.12
CSPG4P12-202ENST00000559989 CATIPQ7Z7H3 387 aa15.78■□□□□ 0.12
CSPG4P12-202ENST00000559989 BUB1BO60566 1050 aaPredicted RBP15.78■□□□□ 0.12
CSPG4P12-202ENST00000559989 IDH1O75874 414 aaKnown RBP15.78■□□□□ 0.12
CSPG4P12-202ENST00000559989 FLIIQ13045 1269 aa15.78■□□□□ 0.12
CSPG4P12-202ENST00000559989 USP25Q9UHP3 1055 aa15.78■□□□□ 0.12
CSPG4P12-202ENST00000559989 A0A1B0GUL7 405 aa15.78■□□□□ 0.12
CSPG4P12-202ENST00000559989 GOLGA8AA7E2F4 631 aa15.78■□□□□ 0.12
CSPG4P12-202ENST00000559989 GOLGA8BA8MQT2 603 aa15.78■□□□□ 0.12
CSPG4P12-202ENST00000559989 FSIP1Q8NA03 581 aa15.78■□□□□ 0.12
CSPG4P12-202ENST00000559989 UVSSAQ2YD98 709 aa15.78■□□□□ 0.12
CSPG4P12-202ENST00000559989 FYB2Q5VWT5 728 aa15.78■□□□□ 0.12
CSPG4P12-202ENST00000559989 TSNAXIP1Q2TAA8 658 aa15.77■□□□□ 0.12
CSPG4P12-202ENST00000559989 TMCO4Q5TGY1 634 aa15.77■□□□□ 0.12
CSPG4P12-202ENST00000559989 KCNK9Q9NPC2 374 aa15.77■□□□□ 0.12
CSPG4P12-202ENST00000559989 GEN1Q17RS7 908 aa15.77■□□□□ 0.12
CSPG4P12-202ENST00000559989 CAVIN4Q5BKX8 364 aa15.77■□□□□ 0.12
CSPG4P12-202ENST00000559989 MYCNP04198 464 aaPredicted RBP15.77■□□□□ 0.11
CSPG4P12-202ENST00000559989 SLF2Q8IX21 1173 aa15.77■□□□□ 0.11
CSPG4P12-202ENST00000559989 MTUS1Q9ULD2 1270 aa15.77■□□□□ 0.11
CSPG4P12-202ENST00000559989 NAPBQ9H115 298 aa15.77■□□□□ 0.11
CSPG4P12-202ENST00000559989 MINDY4BA8MYZ0 360 aa15.76■□□□□ 0.11
CSPG4P12-202ENST00000559989 MYL6BP14649 208 aa15.76■□□□□ 0.11
CSPG4P12-202ENST00000559989 ZSWIM4Q9H7M6 989 aa15.76■□□□□ 0.11
CSPG4P12-202ENST00000559989 RAB11FIP3O75154 756 aa15.76■□□□□ 0.11
CSPG4P12-202ENST00000559989 SH3BGRP55822 239 aaPredicted RBP15.76■□□□□ 0.11
CSPG4P12-202ENST00000559989 MTRF1LQ9UGC7 380 aaKnown RBP15.76■□□□□ 0.11
CSPG4P12-202ENST00000559989 GKAP1Q5VSY0 366 aaPredicted RBP15.76■□□□□ 0.11
CSPG4P12-202ENST00000559989 MAK16Q9BXY0 300 aaKnown RBP15.76■□□□□ 0.11
CSPG4P12-202ENST00000559989 CUL4BQ13620 913 aa15.76■□□□□ 0.11
CSPG4P12-202ENST00000559989 ARFGAP2Q8N6H7 521 aa15.76■□□□□ 0.11
CSPG4P12-202ENST00000559989 KAT6BQ8WYB5 2073 aa15.76■□□□□ 0.11
CSPG4P12-202ENST00000559989 VPS18Q9P253 973 aa15.75■□□□□ 0.11
CSPG4P12-202ENST00000559989 RNF41Q9H4P4 317 aaPredicted RBP15.75■□□□□ 0.11
CSPG4P12-202ENST00000559989 RPGRIP1LQ68CZ1 1315 aa15.75■□□□□ 0.11
CSPG4P12-202ENST00000559989 TSGA10Q9BZW7 698 aa15.75■□□□□ 0.11
CSPG4P12-202ENST00000559989 WDR78Q5VTH9 848 aa15.75■□□□□ 0.11
CSPG4P12-202ENST00000559989 BACH2Q9BYV9 841 aa15.75■□□□□ 0.11
CSPG4P12-202ENST00000559989 RASSF4Q9H2L5 321 aa15.75■□□□□ 0.11
CSPG4P12-202ENST00000559989 MMRN2Q9H8L6 949 aa15.75■□□□□ 0.11
CSPG4P12-202ENST00000559989 PLCD3Q8N3E9 789 aa15.75■□□□□ 0.11
CSPG4P12-202ENST00000559989 TBCAO75347 108 aaKnown RBP15.75■□□□□ 0.11
CSPG4P12-202ENST00000559989 TUBB4AP04350 444 aa15.75■□□□□ 0.11
CSPG4P12-202ENST00000559989 MSANTD4Q8NCY6 345 aa15.75■□□□□ 0.11
CSPG4P12-202ENST00000559989 SPG7Q9UQ90 795 aa15.75■□□□□ 0.11
CSPG4P12-202ENST00000559989 SAMM50Q9Y512 469 aa15.75■□□□□ 0.11
CSPG4P12-202ENST00000559989 ZEB2O60315 1214 aa15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 DACT3Q96B18 629 aaPredicted RBP15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 BICDL2A1A5D9 508 aa15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 MRVI1Q9Y6F6 885 aa15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 SRGAP3O43295 1099 aa15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 AKR1B10O60218 316 aa15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 ABTB2Q8N961 1025 aa15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 UBE2Q2Q8WVN8 375 aa15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 ZMYND15Q9H091 742 aa15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 SPINK5Q9NQ38 1064 aaPredicted RBP15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 PHACTR2O75167 634 aa15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 CLNS1AP54105 237 aaKnown RBP15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 CCDC89Q8N998 374 aa15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 FAM76AQ8TAV0 307 aa15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 KANK4Q5T7N3 995 aaPredicted RBP15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 MIER3Q7Z3K6 550 aa15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 ARHGAP24Q8N264 748 aa15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 TRIM47Q96LD4 638 aa15.74■□□□□ 0.11
CSPG4P12-202ENST00000559989 UBASH3AP57075 661 aa15.73■□□□□ 0.11
CSPG4P12-202ENST00000559989 SDCCAG8Q86SQ7 713 aaPredicted RBP15.73■□□□□ 0.11
CSPG4P12-202ENST00000559989 TMEM110-MUSTN1A8MSY1 372 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms