RNA–Protein interactions for RNA: ENST00000559742.5

PDE8A-211, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-211ENST00000559742 SGSM2O43147 1006 aa22.55■■□□□ 1.2
PDE8A-211ENST00000559742 PTCD1O75127 700 aaKnown RBP22.55■■□□□ 1.2
PDE8A-211ENST00000559742 EPHA10Q5JZY3 1008 aa22.55■■□□□ 1.2
PDE8A-211ENST00000559742 DCAF5Q96JK2 942 aa22.55■■□□□ 1.2
PDE8A-211ENST00000559742 GTPBP4Q9BZE4 634 aaKnown RBP22.55■■□□□ 1.2
PDE8A-211ENST00000559742 NEURL1BA8MQ27 555 aa22.55■■□□□ 1.2
PDE8A-211ENST00000559742 SASH1O94885 1247 aa22.55■■□□□ 1.2
PDE8A-211ENST00000559742 LARP1Q6PKG0 1096 aaKnown RBP22.55■■□□□ 1.2
PDE8A-211ENST00000559742 TLR7Q9NYK1 1049 aaKnown RBP22.55■■□□□ 1.2
PDE8A-211ENST00000559742 GLRX3O76003 335 aaKnown RBP22.54■■□□□ 1.2
PDE8A-211ENST00000559742 ADAMTS7Q9UKP4 1686 aa22.54■■□□□ 1.2
PDE8A-211ENST00000559742 CRYBG1Q9Y4K1 1723 aa22.54■■□□□ 1.2
PDE8A-211ENST00000559742 G3BP1Q13283 466 aaKnown RBP eCLIP22.54■■□□□ 1.2
PDE8A-211ENST00000559742 FOXD4L6Q3SYB3 417 aaPredicted RBP22.54■■□□□ 1.2
PDE8A-211ENST00000559742 FOXD4L3Q6VB84 417 aaPredicted RBP22.54■■□□□ 1.2
PDE8A-211ENST00000559742 ANKRD13DQ6ZTN6 518 aa22.54■■□□□ 1.2
PDE8A-211ENST00000559742 BRINP3Q76B58 766 aa22.54■■□□□ 1.2
PDE8A-211ENST00000559742 CWC22Q9HCG8 908 aaKnown RBP22.54■■□□□ 1.2
PDE8A-211ENST00000559742 PRDM11Q9NQV5 511 aa22.54■■□□□ 1.2
PDE8A-211ENST00000559742 ECHDC1Q9NTX5 307 aa22.54■■□□□ 1.2
PDE8A-211ENST00000559742 SNRPA1P09661 255 aaKnown RBP22.53■■□□□ 1.2
PDE8A-211ENST00000559742 HSPA4P34932 840 aa22.53■■□□□ 1.2
PDE8A-211ENST00000559742 EAF2Q96CJ1 260 aaPredicted RBP22.53■■□□□ 1.2
PDE8A-211ENST00000559742 DIAPH3Q9NSV4 1193 aa22.53■■□□□ 1.2
PDE8A-211ENST00000559742 TOM1L2Q6ZVM7 507 aa22.53■■□□□ 1.2
PDE8A-211ENST00000559742 RASEFQ8IZ41 740 aa22.53■■□□□ 1.2
PDE8A-211ENST00000559742 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.53■■□□□ 1.2
PDE8A-211ENST00000559742 DTNBO60941 627 aa22.52■■□□□ 1.2
PDE8A-211ENST00000559742 CPA1P15085 419 aa22.52■■□□□ 1.2
PDE8A-211ENST00000559742 ANAPC15P60006 121 aa22.52■■□□□ 1.2
PDE8A-211ENST00000559742 GCKRQ14397 625 aa22.52■■□□□ 1.2
PDE8A-211ENST00000559742 KIF20AO95235 890 aa22.52■■□□□ 1.2
PDE8A-211ENST00000559742 CBX1P83916 185 aa22.52■■□□□ 1.2
PDE8A-211ENST00000559742 PRIMPOLQ96LW4 560 aa22.52■■□□□ 1.2
PDE8A-211ENST00000559742 TTC41PQ6P2S7 1318 aa22.52■■□□□ 1.2
PDE8A-211ENST00000559742 TSC1Q92574 1164 aa22.51■■□□□ 1.19
PDE8A-211ENST00000559742 FMNL2Q96PY5 1086 aa22.51■■□□□ 1.19
PDE8A-211ENST00000559742 RAD50Q92878 1312 aa22.51■■□□□ 1.19
PDE8A-211ENST00000559742 DNTTIP2Q5QJE6 756 aaKnown RBP22.51■■□□□ 1.19
PDE8A-211ENST00000559742 UBE3BQ7Z3V4 1068 aa22.51■■□□□ 1.19
PDE8A-211ENST00000559742 DDX54Q8TDD1 881 aaKnown RBP22.51■■□□□ 1.19
PDE8A-211ENST00000559742 LSG1Q9H089 658 aaKnown RBP22.51■■□□□ 1.19
PDE8A-211ENST00000559742 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.51■■□□□ 1.195e-7■■□□□ 12.3
PDE8A-211ENST00000559742 DCCP43146 1447 aa22.51■■□□□ 1.19
PDE8A-211ENST00000559742 PTMAP06454 111 aaKnown RBP22.5■■□□□ 1.19
PDE8A-211ENST00000559742 GTF2F1P35269 517 aaKnown RBP eCLIP22.5■■□□□ 1.19
PDE8A-211ENST00000559742 RNF214Q8ND24 703 aa22.5■■□□□ 1.19
PDE8A-211ENST00000559742 METTL22Q9BUU2 404 aaPredicted RBP22.5■■□□□ 1.19
PDE8A-211ENST00000559742 LMTK3Q96Q04 1460 aa22.5■■□□□ 1.19
PDE8A-211ENST00000559742 PPP4R3BQ5MIZ7 849 aa22.5■■□□□ 1.19
PDE8A-211ENST00000559742 ERC1Q8IUD2 1116 aa22.5■■□□□ 1.19
PDE8A-211ENST00000559742 NSFL1CQ9UNZ2 370 aaKnown RBP22.5■■□□□ 1.19
PDE8A-211ENST00000559742 SNX14Q9Y5W7 946 aa22.5■■□□□ 1.19
PDE8A-211ENST00000559742 GPATCH3Q96I76 525 aa22.49■■□□□ 1.19
PDE8A-211ENST00000559742 BOLA2Q9H3K6 86 aa22.49■■□□□ 1.19
PDE8A-211ENST00000559742 STRN4Q9NRL3 753 aa22.49■■□□□ 1.19
PDE8A-211ENST00000559742 HDAC5Q9UQL6 1122 aa22.49■■□□□ 1.19
PDE8A-211ENST00000559742 PTH1RQ03431 593 aa22.49■■□□□ 1.19
PDE8A-211ENST00000559742 LRP10Q7Z4F1 713 aa22.48■■□□□ 1.19
PDE8A-211ENST00000559742 UTYO14607 1347 aa22.48■■□□□ 1.19
PDE8A-211ENST00000559742 LETM1O95202 739 aaPredicted RBP22.48■■□□□ 1.19
PDE8A-211ENST00000559742 HMGN5P82970 282 aaKnown RBP22.48■■□□□ 1.19
PDE8A-211ENST00000559742 MCM2P49736 904 aa22.47■■□□□ 1.19
PDE8A-211ENST00000559742 CCDC9Q9Y3X0 531 aaKnown RBP22.47■■□□□ 1.19
PDE8A-211ENST00000559742 USP42Q9H9J4 1324 aaKnown RBP22.47■■□□□ 1.19
PDE8A-211ENST00000559742 ATP2B3Q16720 1220 aa22.47■■□□□ 1.19
PDE8A-211ENST00000559742 FAM227BQ96M60 508 aa22.47■■□□□ 1.19
PDE8A-211ENST00000559742 NDUFB9Q9Y6M9 179 aa22.47■■□□□ 1.19
PDE8A-211ENST00000559742 EDC3Q96F86 508 aaKnown RBP22.46■■□□□ 1.19
PDE8A-211ENST00000559742 A0A087WZG4 1122 aa22.45■■□□□ 1.19
PDE8A-211ENST00000559742 PRPF40BQ6NWY9 871 aaKnown RBP22.45■■□□□ 1.19
PDE8A-211ENST00000559742 CASTP20810 708 aaKnown RBP22.45■■□□□ 1.18
PDE8A-211ENST00000559742 PIBF1Q8WXW3 757 aa22.45■■□□□ 1.18
PDE8A-211ENST00000559742 CHMP3Q9Y3E7 222 aa22.45■■□□□ 1.18
PDE8A-211ENST00000559742 XIRP1Q702N8 1843 aaKnown RBP22.45■■□□□ 1.18
PDE8A-211ENST00000559742 ZNF335Q9H4Z2 1342 aaPredicted RBP22.45■■□□□ 1.18
PDE8A-211ENST00000559742 CUL4AQ13619 759 aa22.45■■□□□ 1.18
PDE8A-211ENST00000559742 AFDNP55196 1824 aaKnown RBP22.44■■□□□ 1.18
PDE8A-211ENST00000559742 ZCRB1Q8TBF4 217 aaKnown RBP22.44■■□□□ 1.18
PDE8A-211ENST00000559742 MBD3O95983 291 aa22.44■■□□□ 1.18
PDE8A-211ENST00000559742 AK2P54819 239 aa22.44■■□□□ 1.18
PDE8A-211ENST00000559742 ADCK5Q3MIX3 580 aa22.44■■□□□ 1.18
PDE8A-211ENST00000559742 EVI5LQ96CN4 794 aa22.44■■□□□ 1.18
PDE8A-211ENST00000559742 STRCQ7RTU9 1775 aa22.43■■□□□ 1.18
PDE8A-211ENST00000559742 SLAIN2Q9P270 581 aa22.43■■□□□ 1.18
PDE8A-211ENST00000559742 ZNF330Q9Y3S2 320 aaPredicted RBP22.43■■□□□ 1.18
PDE8A-211ENST00000559742 NBPF26B4DH59 902 aa22.43■■□□□ 1.18
PDE8A-211ENST00000559742 A1BGP04217 495 aa22.43■■□□□ 1.18
PDE8A-211ENST00000559742 NOLC1Q14978 699 aaKnown RBP eCLIP22.43■■□□□ 1.18
PDE8A-211ENST00000559742 TPRNQ4KMQ1 711 aa22.43■■□□□ 1.18
PDE8A-211ENST00000559742 NBPF14Q5TI25 921 aa22.43■■□□□ 1.18
PDE8A-211ENST00000559742 NBPF10Q6P3W6 841 aaKnown RBP22.43■■□□□ 1.18
PDE8A-211ENST00000559742 NBPF15Q8N660 670 aa22.43■■□□□ 1.18
PDE8A-211ENST00000559742 BBXQ8WY36 941 aaPredicted RBP22.43■■□□□ 1.18
PDE8A-211ENST00000559742 WDR17Q8IZU2 1322 aa22.42■■□□□ 1.18
PDE8A-211ENST00000559742 NMIQ13287 307 aaPredicted RBP22.42■■□□□ 1.18
PDE8A-211ENST00000559742 TTLL7Q6ZT98 887 aa22.42■■□□□ 1.18
PDE8A-211ENST00000559742 RUFY2Q8WXA3 655 aa22.42■■□□□ 1.18
PDE8A-211ENST00000559742 FSD1Q9BTV5 496 aa22.42■■□□□ 1.18
PDE8A-211ENST00000559742 TSPY26PQ9H489 355 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms