RNA–Protein interactions for RNA: ENST00000559741.5

PSME1-206, Transcript of proteasome activator subunit 1, humanhuman

TSL 3

Gene PSME1, Length 763 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME1-206ENST00000559741 STK31Q9BXU1 1019 aa12.9□□□□□ -0.34
PSME1-206ENST00000559741 PHAXQ9H814 394 aaKnown RBP12.9□□□□□ -0.34
PSME1-206ENST00000559741 CACNA1FO60840 1977 aa12.89□□□□□ -0.35
PSME1-206ENST00000559741 VAMP4O75379 141 aa12.89□□□□□ -0.35
PSME1-206ENST00000559741 DDX58O95786 925 aaKnown RBP12.89□□□□□ -0.35
PSME1-206ENST00000559741 CRY2Q49AN0 593 aa12.89□□□□□ -0.35
PSME1-206ENST00000559741 NUTM1Q86Y26 1132 aa12.89□□□□□ -0.35
PSME1-206ENST00000559741 ZNF526Q8TF50 670 aaPredicted RBP12.89□□□□□ -0.35
PSME1-206ENST00000559741 ISCA1Q9BUE6 129 aa12.89□□□□□ -0.35
PSME1-206ENST00000559741 ABCC12Q96J65 1359 aa12.89□□□□□ -0.35
PSME1-206ENST00000559741 EXOSC9Q06265 439 aaKnown RBP12.88□□□□□ -0.35
PSME1-206ENST00000559741 RIC3Q7Z5B4 369 aa12.88□□□□□ -0.35
PSME1-206ENST00000559741 ADCY9O60503 1353 aa12.88□□□□□ -0.35
PSME1-206ENST00000559741 TNRC6CQ9HCJ0 1690 aaKnown RBP12.88□□□□□ -0.35
PSME1-206ENST00000559741 ALDH1B1P30837 517 aa12.87□□□□□ -0.35
PSME1-206ENST00000559741 SOGA3Q5TF21 947 aa12.87□□□□□ -0.35
PSME1-206ENST00000559741 PRPF40BQ6NWY9 871 aaKnown RBP12.87□□□□□ -0.35
PSME1-206ENST00000559741 MIER1Q8N108 512 aa12.87□□□□□ -0.35
PSME1-206ENST00000559741 GPBP1L1Q9HC44 474 aaPredicted RBP12.87□□□□□ -0.35
PSME1-206ENST00000559741 TRMT112Q9UI30 125 aaKnown RBP12.87□□□□□ -0.35
PSME1-206ENST00000559741 SH3TC1Q8TE82 1336 aa12.87□□□□□ -0.35
PSME1-206ENST00000559741 SLX4Q8IY92 1834 aa12.86□□□□□ -0.35
PSME1-206ENST00000559741 E9PSI1 815 aa12.86□□□□□ -0.35
PSME1-206ENST00000559741 SLC4A2P04920 1241 aa12.86□□□□□ -0.35
PSME1-206ENST00000559741 HOXA10P31260 410 aaPredicted RBP12.86□□□□□ -0.35
PSME1-206ENST00000559741 NLRP3Q96P20 1036 aa12.86□□□□□ -0.35
PSME1-206ENST00000559741 SBF1O95248 1867 aa12.86□□□□□ -0.35
PSME1-206ENST00000559741 CACNA1SQ13698 1873 aa12.86□□□□□ -0.35
PSME1-206ENST00000559741 FER1L6Q2WGJ9 1857 aa12.85□□□□□ -0.35
PSME1-206ENST00000559741 C21orf2O43822 256 aa12.85□□□□□ -0.35
PSME1-206ENST00000559741 KSR2Q6VAB6 950 aa12.85□□□□□ -0.35
PSME1-206ENST00000559741 CCDC191Q8NCU4 936 aa12.85□□□□□ -0.35
PSME1-206ENST00000559741 C7orf43Q8WVR3 580 aa12.85□□□□□ -0.35
PSME1-206ENST00000559741 RPGRQ92834 1020 aaKnown RBP12.85□□□□□ -0.35
PSME1-206ENST00000559741 METTL22Q9BUU2 404 aaPredicted RBP12.85□□□□□ -0.35
PSME1-206ENST00000559741 LTBP3Q9NS15 1303 aa12.85□□□□□ -0.35
PSME1-206ENST00000559741 PI4KAP2A4QPH2 592 aa12.84□□□□□ -0.35
PSME1-206ENST00000559741 ATP5J2-PTCD1G3V325 749 aa12.84□□□□□ -0.35
PSME1-206ENST00000559741 NFKBIEO00221 500 aa12.84□□□□□ -0.35
PSME1-206ENST00000559741 SLFN5Q08AF3 891 aa12.84□□□□□ -0.35
PSME1-206ENST00000559741 PI4KAP1Q8N8J0 262 aa12.84□□□□□ -0.35
PSME1-206ENST00000559741 RBM17Q96I25 401 aaKnown RBP12.84□□□□□ -0.35
PSME1-206ENST00000559741 CRAMP1Q96RY5 1269 aa12.84□□□□□ -0.35
PSME1-206ENST00000559741 ZC3H4Q9UPT8 1303 aaKnown RBP12.84□□□□□ -0.35
PSME1-206ENST00000559741 LAMB2P55268 1798 aa12.84□□□□□ -0.35
PSME1-206ENST00000559741 DDX60Q8IY21 1712 aaKnown RBP12.83□□□□□ -0.36
PSME1-206ENST00000559741 TCERG1O14776 1098 aaKnown RBP12.83□□□□□ -0.36
PSME1-206ENST00000559741 LMNB1P20700 586 aa12.83□□□□□ -0.36
PSME1-206ENST00000559741 FLIIQ13045 1269 aa12.83□□□□□ -0.36
PSME1-206ENST00000559741 C9orf131Q5VYM1 1079 aa12.83□□□□□ -0.36
PSME1-206ENST00000559741 G2E3Q7L622 706 aa12.83□□□□□ -0.36
PSME1-206ENST00000559741 TRMT2AQ8IZ69 625 aaKnown RBP12.83□□□□□ -0.36
PSME1-206ENST00000559741 MYD88Q99836 296 aa12.83□□□□□ -0.36
PSME1-206ENST00000559741 MAP3K2Q9Y2U5 619 aa12.83□□□□□ -0.36
PSME1-206ENST00000559741 HCLS1P14317 486 aaPredicted RBP12.82□□□□□ -0.36
PSME1-206ENST00000559741 HSP90B1P14625 803 aaKnown RBP12.82□□□□□ -0.36
PSME1-206ENST00000559741 NEXNQ0ZGT2 675 aa12.82□□□□□ -0.36
PSME1-206ENST00000559741 GRIPAP1Q4V328 841 aa12.82□□□□□ -0.36
PSME1-206ENST00000559741 CCDC93Q567U6 631 aa12.82□□□□□ -0.36
PSME1-206ENST00000559741 CC2D2BQ6DHV5 1058 aa12.82□□□□□ -0.36
PSME1-206ENST00000559741 C3orf67Q6ZVT6 689 aa12.82□□□□□ -0.36
PSME1-206ENST00000559741 SYNE4Q8N205 404 aa12.82□□□□□ -0.36
PSME1-206ENST00000559741 ZBTB38Q8NAP3 1195 aaPredicted RBP12.82□□□□□ -0.36
PSME1-206ENST00000559741 ZNF428Q96B54 188 aa12.82□□□□□ -0.36
PSME1-206ENST00000559741 CWC25Q9NXE8 425 aaPredicted RBP12.82□□□□□ -0.36
PSME1-206ENST00000559741 RNF181Q9P0P0 153 aa12.82□□□□□ -0.36
PSME1-206ENST00000559741 PCCAP05165 728 aaPredicted RBP12.81□□□□□ -0.36
PSME1-206ENST00000559741 RASSF7Q02833 373 aa12.81□□□□□ -0.36
PSME1-206ENST00000559741 FKBP5Q13451 457 aaPredicted RBP12.81□□□□□ -0.36
PSME1-206ENST00000559741 SF3B3Q15393 1217 aaKnown RBP12.81□□□□□ -0.36
PSME1-206ENST00000559741 RTKN2Q8IZC4 609 aa12.81□□□□□ -0.36
PSME1-206ENST00000559741 FAM89AQ96GI7 184 aa12.81□□□□□ -0.36
PSME1-206ENST00000559741 ZNF219Q9P2Y4 722 aaPredicted RBP12.81□□□□□ -0.36
PSME1-206ENST00000559741 CCDC88AQ3V6T2 1871 aa12.8□□□□□ -0.36
PSME1-206ENST00000559741 SNED1Q8TER0 1413 aa12.8□□□□□ -0.36
PSME1-206ENST00000559741 DICER1Q9UPY3 1922 aaKnown RBP12.8□□□□□ -0.36
PSME1-206ENST00000559741 IRS4O14654 1257 aaPredicted RBP12.8□□□□□ -0.36
PSME1-206ENST00000559741 IGKV5-2P06315 115 aa12.8□□□□□ -0.36
PSME1-206ENST00000559741 PRELPP51888 382 aa12.8□□□□□ -0.36
PSME1-206ENST00000559741 DNAAF4Q8WXU2 420 aa12.8□□□□□ -0.36
PSME1-206ENST00000559741 TAOK3Q9H2K8 898 aa12.8□□□□□ -0.36
PSME1-206ENST00000559741 NEURL1BA8MQ27 555 aa12.79□□□□□ -0.36
PSME1-206ENST00000559741 BBOX1O75936 387 aa12.79□□□□□ -0.36
PSME1-206ENST00000559741 CT47B1P0C2W7 299 aaPredicted RBP12.79□□□□□ -0.36
PSME1-206ENST00000559741 FKBP4Q02790 459 aaKnown RBP eCLIP12.79□□□□□ -0.36
PSME1-206ENST00000559741 DDX46Q7L014 1031 aaKnown RBP12.79□□□□□ -0.36
PSME1-206ENST00000559741 CDCA7LQ96GN5 454 aa12.79□□□□□ -0.36
PSME1-206ENST00000559741 CDHR2Q9BYE9 1310 aa12.79□□□□□ -0.36
PSME1-206ENST00000559741 PPEF1O14829 653 aaPredicted RBP12.78□□□□□ -0.36
PSME1-206ENST00000559741 PDE8AO60658 829 aa12.78□□□□□ -0.36
PSME1-206ENST00000559741 GRAPQ13588 217 aa12.78□□□□□ -0.36
PSME1-206ENST00000559741 TMC4Q7Z404 712 aa12.78□□□□□ -0.36
PSME1-206ENST00000559741 LINS1Q8NG48 757 aa12.78□□□□□ -0.36
PSME1-206ENST00000559741 GRAPLQ8TC17 118 aaPredicted RBP12.78□□□□□ -0.36
PSME1-206ENST00000559741 PSMD1Q99460 953 aa12.78□□□□□ -0.36
PSME1-206ENST00000559741 ATP6V0A2Q9Y487 856 aa12.78□□□□□ -0.36
PSME1-206ENST00000559741 ABCC4O15439 1325 aa12.78□□□□□ -0.36
PSME1-206ENST00000559741 TIAM2Q8IVF5 1701 aa12.77□□□□□ -0.36
PSME1-206ENST00000559741 CWF19L2Q2TBE0 894 aaKnown RBP12.77□□□□□ -0.37
PSME1-206ENST00000559741 ALDH1L2Q3SY69 923 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms