RNA–Protein interactions for RNA: ENST00000558777.5

RMDN3-207, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,139 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-207ENST00000558777 NECTIN1Q15223 517 aa20.61■□□□□ 0.89
RMDN3-207ENST00000558777 TOM1L2Q6ZVM7 507 aa20.61■□□□□ 0.89
RMDN3-207ENST00000558777 RUFY3Q7L099 469 aa20.61■□□□□ 0.89
RMDN3-207ENST00000558777 CHAMP1Q96JM3 812 aa20.61■□□□□ 0.89
RMDN3-207ENST00000558777 TM6SF1Q9BZW5 370 aa20.61■□□□□ 0.89
RMDN3-207ENST00000558777 LIMCH1Q9UPQ0 1083 aa20.61■□□□□ 0.89
RMDN3-207ENST00000558777 ERVV-2B6SEH9 535 aa20.6■□□□□ 0.89
RMDN3-207ENST00000558777 NCLP19338 710 aaKnown RBP20.6■□□□□ 0.89
RMDN3-207ENST00000558777 UBE3BQ7Z3V4 1068 aa20.6■□□□□ 0.89
RMDN3-207ENST00000558777 BOLA2Q9H3K6 86 aa20.6■□□□□ 0.89
RMDN3-207ENST00000558777 NMIQ13287 307 aaPredicted RBP20.6■□□□□ 0.89
RMDN3-207ENST00000558777 NKX1-1Q15270 411 aaPredicted RBP20.6■□□□□ 0.89
RMDN3-207ENST00000558777 ZSCAN23Q3MJ62 389 aa20.6■□□□□ 0.89
RMDN3-207ENST00000558777 JARID2Q92833 1246 aaPredicted RBP20.6■□□□□ 0.89
RMDN3-207ENST00000558777 FAM227BQ96M60 508 aa20.6■□□□□ 0.89
RMDN3-207ENST00000558777 A0A087WZG4 1122 aa20.59■□□□□ 0.89
RMDN3-207ENST00000558777 NBPF26B4DH59 902 aa20.59■□□□□ 0.89
RMDN3-207ENST00000558777 ATP5J2-PTCD1G3V325 749 aa20.59■□□□□ 0.89
RMDN3-207ENST00000558777 PTCD1O75127 700 aaKnown RBP20.59■□□□□ 0.89
RMDN3-207ENST00000558777 CASTP20810 708 aaKnown RBP20.59■□□□□ 0.89
RMDN3-207ENST00000558777 NBPF14Q5TI25 921 aa20.59■□□□□ 0.89
RMDN3-207ENST00000558777 PRPF40BQ6NWY9 871 aaKnown RBP20.59■□□□□ 0.89
RMDN3-207ENST00000558777 NBPF10Q6P3W6 841 aaKnown RBP20.59■□□□□ 0.89
RMDN3-207ENST00000558777 NBPF15Q8N660 670 aa20.59■□□□□ 0.89
RMDN3-207ENST00000558777 MAP4K1Q92918 833 aa20.59■□□□□ 0.89
RMDN3-207ENST00000558777 ZSWIM6Q9HCJ5 1215 aa20.59■□□□□ 0.89
RMDN3-207ENST00000558777 COL5A2P05997 1499 aaPredicted RBP20.59■□□□□ 0.89
RMDN3-207ENST00000558777 LAMB4A4D0S4 1761 aa20.59■□□□□ 0.89
RMDN3-207ENST00000558777 WDR33Q9C0J8 1336 aaKnown RBP20.58■□□□□ 0.89
RMDN3-207ENST00000558777 VPS53Q5VIR6 699 aa20.58■□□□□ 0.89
RMDN3-207ENST00000558777 SLAIN2Q9P270 581 aa20.58■□□□□ 0.89
RMDN3-207ENST00000558777 ARFGEF2Q9Y6D5 1785 aa20.58■□□□□ 0.88
RMDN3-207ENST00000558777 ADCK5Q3MIX3 580 aa20.57■□□□□ 0.88
RMDN3-207ENST00000558777 JAKMIP1Q96N16 626 aaKnown RBP20.57■□□□□ 0.88
RMDN3-207ENST00000558777 TNNI3KQ59H18 835 aa20.57■□□□□ 0.88
RMDN3-207ENST00000558777 FSD1Q9BTV5 496 aa20.57■□□□□ 0.88
RMDN3-207ENST00000558777 CARD10Q9BWT7 1032 aa20.57■□□□□ 0.88
RMDN3-207ENST00000558777 RBM8AQ9Y5S9 174 aaKnown RBP20.57■□□□□ 0.88
RMDN3-207ENST00000558777 FPGT-TNNI3KV9GXZ4 949 aa20.57■□□□□ 0.88
RMDN3-207ENST00000558777 RPAP1Q9BWH6 1393 aaPredicted RBP20.56■□□□□ 0.88
RMDN3-207ENST00000558777 CPA1P15085 419 aa20.56■□□□□ 0.88
RMDN3-207ENST00000558777 ATP5JP18859 108 aa20.56■□□□□ 0.88
RMDN3-207ENST00000558777 TFCP2Q12800 502 aa20.56■□□□□ 0.88
RMDN3-207ENST00000558777 RRAGDQ9NQL2 400 aaPredicted RBP20.56■□□□□ 0.88
RMDN3-207ENST00000558777 DBNLQ9UJU6 430 aaKnown RBP20.56■□□□□ 0.88
RMDN3-207ENST00000558777 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.56■□□□□ 0.88
RMDN3-207ENST00000558777 A0A0D9SFI3 127 aa20.56■□□□□ 0.88
RMDN3-207ENST00000558777 H7C1W4 665 aa20.56■□□□□ 0.88
RMDN3-207ENST00000558777 MBD3O95983 291 aa20.56■□□□□ 0.88
RMDN3-207ENST00000558777 IL2RBP14784 551 aa20.56■□□□□ 0.88
RMDN3-207ENST00000558777 ZKSCAN1P17029 563 aaPredicted RBP20.56■□□□□ 0.88
RMDN3-207ENST00000558777 CREB3L3Q68CJ9 461 aa20.56■□□□□ 0.88
RMDN3-207ENST00000558777 DNAJC5Q9H3Z4 198 aa20.56■□□□□ 0.88
RMDN3-207ENST00000558777 PDRG1Q9NUG6 133 aa20.56■□□□□ 0.88
RMDN3-207ENST00000558777 CYP46A1Q9Y6A2 500 aa20.56■□□□□ 0.88
RMDN3-207ENST00000558777 MED23Q9ULK4 1368 aa20.55■□□□□ 0.88
RMDN3-207ENST00000558777 KCPQ6ZWJ8 1503 aa20.54■□□□□ 0.88
RMDN3-207ENST00000558777 NASPP49321 788 aaPredicted RBP20.54■□□□□ 0.88
RMDN3-207ENST00000558777 FOXO4P98177 505 aa20.54■□□□□ 0.88
RMDN3-207ENST00000558777 TTLL7Q6ZT98 887 aa20.54■□□□□ 0.88
RMDN3-207ENST00000558777 ZSCAN31Q96LW9 406 aaPredicted RBP20.54■□□□□ 0.88
RMDN3-207ENST00000558777 LARP6Q9BRS8 491 aaKnown RBP20.54■□□□□ 0.88
RMDN3-207ENST00000558777 RBM27Q9P2N5 1060 aaKnown RBP20.54■□□□□ 0.88
RMDN3-207ENST00000558777 NSFL1CQ9UNZ2 370 aaKnown RBP20.54■□□□□ 0.88
RMDN3-207ENST00000558777 AFDNP55196 1824 aaKnown RBP20.54■□□□□ 0.88
RMDN3-207ENST00000558777 LMBR1LQ6UX01 489 aa20.53■□□□□ 0.88
RMDN3-207ENST00000558777 TMEM63CQ9P1W3 806 aa20.53■□□□□ 0.88
RMDN3-207ENST00000558777 JCADQ9P266 1359 aa20.53■□□□□ 0.88
RMDN3-207ENST00000558777 UBR2Q8IWV8 1755 aa20.53■□□□□ 0.88
RMDN3-207ENST00000558777 SLC27A2O14975 620 aa20.53■□□□□ 0.88
RMDN3-207ENST00000558777 LARGE1O95461 756 aa20.53■□□□□ 0.88
RMDN3-207ENST00000558777 SH2B1Q9NRF2 756 aaPredicted RBP20.53■□□□□ 0.88
RMDN3-207ENST00000558777 A1BGP04217 495 aa20.52■□□□□ 0.88
RMDN3-207ENST00000558777 KCNJ4P48050 445 aa20.52■□□□□ 0.88
RMDN3-207ENST00000558777 CWC25Q9NXE8 425 aaPredicted RBP20.52■□□□□ 0.88
RMDN3-207ENST00000558777 TNS2Q63HR2 1409 aa20.52■□□□□ 0.88
RMDN3-207ENST00000558777 SMC3Q9UQE7 1217 aa20.51■□□□□ 0.87
RMDN3-207ENST00000558777 ZSCAN22P10073 491 aaPredicted RBP20.51■□□□□ 0.87
RMDN3-207ENST00000558777 PSMA5P28066 241 aa20.51■□□□□ 0.87
RMDN3-207ENST00000558777 EDC3Q96F86 508 aaKnown RBP20.51■□□□□ 0.87
RMDN3-207ENST00000558777 RFX7Q2KHR2 1363 aa20.51■□□□□ 0.87
RMDN3-207ENST00000558777 PAPPAQ13219 1627 aa20.51■□□□□ 0.87
RMDN3-207ENST00000558777 SYT1P21579 422 aa20.5■□□□□ 0.87
RMDN3-207ENST00000558777 RNF20Q5VTR2 975 aa20.5■□□□□ 0.87
RMDN3-207ENST00000558777 ZNF589Q86UQ0 364 aaPredicted RBP20.5■□□□□ 0.87
RMDN3-207ENST00000558777 DDX54Q8TDD1 881 aaKnown RBP20.5■□□□□ 0.87
RMDN3-207ENST00000558777 ZNF335Q9H4Z2 1342 aaPredicted RBP20.5■□□□□ 0.87
RMDN3-207ENST00000558777 STX6O43752 255 aa20.5■□□□□ 0.87
RMDN3-207ENST00000558777 PRIM1P49642 420 aaKnown RBP20.5■□□□□ 0.87
RMDN3-207ENST00000558777 PPP1R9BQ96SB3 815 aa20.5■□□□□ 0.87
RMDN3-207ENST00000558777 DBNDD2Q9BQY9 259 aa20.5■□□□□ 0.87
RMDN3-207ENST00000558777 CCDC173Q0VFZ6 552 aa20.49■□□□□ 0.87
RMDN3-207ENST00000558777 TSGA10IPQ3SY00 556 aa20.49■□□□□ 0.87
RMDN3-207ENST00000558777 TMEM87AQ8NBN3 555 aa20.49■□□□□ 0.87
RMDN3-207ENST00000558777 CCDC191Q8NCU4 936 aa20.49■□□□□ 0.87
RMDN3-207ENST00000558777 HAUS7Q99871 368 aa20.49■□□□□ 0.87
RMDN3-207ENST00000558777 STRCQ7RTU9 1775 aa20.48■□□□□ 0.87
RMDN3-207ENST00000558777 TAF5LO75529 589 aa20.48■□□□□ 0.87
RMDN3-207ENST00000558777 LRSAM1Q6UWE0 723 aa20.48■□□□□ 0.87
RMDN3-207ENST00000558777 CCDC83Q8IWF9 413 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 1299.6 ms