RNA–Protein interactions for RNA: ENST00000558449.1

AC012409.1-202, humanhuman

TSL 2 BASIC

Gene AC012409.1, Length 639 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC012409.1-202ENST00000558449 PSMD2Q13200 908 aa10.19□□□□□ -0.78
AC012409.1-202ENST00000558449 SCARF1Q14162 830 aa10.19□□□□□ -0.78
AC012409.1-202ENST00000558449 LRRC69Q6ZNQ3 347 aa10.19□□□□□ -0.78
AC012409.1-202ENST00000558449 BTLAQ7Z6A9 289 aa10.19□□□□□ -0.78
AC012409.1-202ENST00000558449 USP20Q9Y2K6 914 aa10.19□□□□□ -0.78
AC012409.1-202ENST00000558449 A0A1B0GTH6 734 aa10.18□□□□□ -0.78
AC012409.1-202ENST00000558449 FAM187AA6NFU0 413 aa10.18□□□□□ -0.78
AC012409.1-202ENST00000558449 FIGNL2A6NMB9 653 aa10.18□□□□□ -0.78
AC012409.1-202ENST00000558449 INPP5BP32019 993 aa10.18□□□□□ -0.78
AC012409.1-202ENST00000558449 LDLRAD1Q5T700 205 aa10.18□□□□□ -0.78
AC012409.1-202ENST00000558449 CFHR5Q9BXR6 569 aa10.18□□□□□ -0.78
AC012409.1-202ENST00000558449 RTCBQ9Y3I0 505 aaKnown RBP10.18□□□□□ -0.78
AC012409.1-202ENST00000558449 SOS2Q07890 1332 aaPredicted RBP10.17□□□□□ -0.78
AC012409.1-202ENST00000558449 AVPP01185 164 aa10.17□□□□□ -0.78
AC012409.1-202ENST00000558449 ITGAEP38570 1179 aa10.17□□□□□ -0.78
AC012409.1-202ENST00000558449 CMTR1Q8N1G2 835 aaKnown RBP10.17□□□□□ -0.78
AC012409.1-202ENST00000558449 DNAJC25Q9H1X3 360 aa10.17□□□□□ -0.78
AC012409.1-202ENST00000558449 A0A1W2PNR3 127 aa10.16□□□□□ -0.78
AC012409.1-202ENST00000558449 XKR5Q6UX68 686 aa10.16□□□□□ -0.78
AC012409.1-202ENST00000558449 TMEM87AQ8NBN3 555 aa10.16□□□□□ -0.78
AC012409.1-202ENST00000558449 FBF1Q8TES7 1133 aa10.16□□□□□ -0.78
AC012409.1-202ENST00000558449 FNDC3AQ9Y2H6 1198 aaKnown RBP10.16□□□□□ -0.78
AC012409.1-202ENST00000558449 SCAMP3O14828 347 aaKnown RBP10.15□□□□□ -0.78
AC012409.1-202ENST00000558449 CPNE3O75131 537 aaKnown RBP10.15□□□□□ -0.78
AC012409.1-202ENST00000558449 BMP1P13497 986 aa10.15□□□□□ -0.78
AC012409.1-202ENST00000558449 TRIM46Q7Z4K8 759 aa10.15□□□□□ -0.78
AC012409.1-202ENST00000558449 VTI1BQ9UEU0 232 aa10.15□□□□□ -0.78
AC012409.1-202ENST00000558449 KCNMB2Q9Y691 235 aa10.15□□□□□ -0.78
AC012409.1-202ENST00000558449 TNFRSF21O75509 655 aa10.14□□□□□ -0.79
AC012409.1-202ENST00000558449 GNA15P30679 374 aa10.14□□□□□ -0.79
AC012409.1-202ENST00000558449 GJA3Q9Y6H8 435 aa10.14□□□□□ -0.79
AC012409.1-202ENST00000558449 UBAP1LF5GYI3 381 aa10.13□□□□□ -0.79
AC012409.1-202ENST00000558449 TRIP4Q15650 581 aaPredicted RBP10.13□□□□□ -0.79
AC012409.1-202ENST00000558449 PDE12Q6L8Q7 609 aaKnown RBP10.13□□□□□ -0.79
AC012409.1-202ENST00000558449 ZNF438Q7Z4V0 828 aa10.13□□□□□ -0.79
AC012409.1-202ENST00000558449 CEP63Q96MT8 703 aa10.13□□□□□ -0.79
AC012409.1-202ENST00000558449 GPAMQ9HCL2 828 aa10.13□□□□□ -0.79
AC012409.1-202ENST00000558449 USP35Q9P2H5 1018 aa10.13□□□□□ -0.79
AC012409.1-202ENST00000558449 FOXD3Q9UJU5 478 aaPredicted RBP10.13□□□□□ -0.79
AC012409.1-202ENST00000558449 RGS20O76081 388 aa10.12□□□□□ -0.79
AC012409.1-202ENST00000558449 GRNP28799 593 aaKnown RBP10.12□□□□□ -0.79
AC012409.1-202ENST00000558449 HDLBPQ00341 1268 aaKnown RBP10.12□□□□□ -0.79
AC012409.1-202ENST00000558449 TYRO3Q06418 890 aa10.12□□□□□ -0.79
AC012409.1-202ENST00000558449 ZFP42Q96MM3 310 aa10.12□□□□□ -0.79
AC012409.1-202ENST00000558449 FRMD6Q96NE9 622 aa10.12□□□□□ -0.79
AC012409.1-202ENST00000558449 CRISPLD1Q9H336 500 aa10.12□□□□□ -0.79
AC012409.1-202ENST00000558449 RUBCNLQ9H714 662 aa10.12□□□□□ -0.79
AC012409.1-202ENST00000558449 ELP3Q9H9T3 547 aa10.12□□□□□ -0.79
AC012409.1-202ENST00000558449 AK5Q9Y6K8 562 aa10.12□□□□□ -0.79
AC012409.1-202ENST00000558449 F11P03951 625 aa10.11□□□□□ -0.79
AC012409.1-202ENST00000558449 EPB42P16452 691 aa10.11□□□□□ -0.79
AC012409.1-202ENST00000558449 SMCPP49901 116 aaPredicted RBP10.11□□□□□ -0.79
AC012409.1-202ENST00000558449 CTC1Q2NKJ3 1217 aa10.11□□□□□ -0.79
AC012409.1-202ENST00000558449 C9orf131Q5VYM1 1079 aa10.11□□□□□ -0.79
AC012409.1-202ENST00000558449 USPL1Q5W0Q7 1092 aa10.11□□□□□ -0.79
AC012409.1-202ENST00000558449 ZFYVE28Q9HCC9 887 aa10.11□□□□□ -0.79
AC012409.1-202ENST00000558449 DYRK1BQ9Y463 629 aa10.11□□□□□ -0.79
AC012409.1-202ENST00000558449 SNX29Q8TEQ0 813 aa10.1□□□□□ -0.79
AC012409.1-202ENST00000558449 GAS2L1Q99501 681 aaPredicted RBP10.1□□□□□ -0.79
AC012409.1-202ENST00000558449 TMEM63CQ9P1W3 806 aa10.1□□□□□ -0.79
AC012409.1-202ENST00000558449 SPG7Q9UQ90 795 aa10.1□□□□□ -0.79
AC012409.1-202ENST00000558449 ERCC5P28715 1186 aaPredicted RBP10.09□□□□□ -0.79
AC012409.1-202ENST00000558449 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.09□□□□□ -0.79
AC012409.1-202ENST00000558449 PGBD3Q8N328 593 aa10.09□□□□□ -0.79
AC012409.1-202ENST00000558449 CCDC74AQ96AQ1 378 aa10.09□□□□□ -0.79
AC012409.1-202ENST00000558449 C8orf37Q96NL8 207 aa10.09□□□□□ -0.79
AC012409.1-202ENST00000558449 DNMT3LQ9UJW3 386 aa10.09□□□□□ -0.79
AC012409.1-202ENST00000558449 PHACTR2O75167 634 aa10.08□□□□□ -0.8
AC012409.1-202ENST00000558449 XYLBO75191 536 aa10.08□□□□□ -0.8
AC012409.1-202ENST00000558449 DGAT1O75907 488 aa10.08□□□□□ -0.8
AC012409.1-202ENST00000558449 ZC3H6P61129 1189 aaKnown RBP10.08□□□□□ -0.8
AC012409.1-202ENST00000558449 NLRP8Q86W28 1048 aa10.08□□□□□ -0.8
AC012409.1-202ENST00000558449 ZCCHC2Q9C0B9 1178 aaKnown RBP10.08□□□□□ -0.8
AC012409.1-202ENST00000558449 BRD7Q9NPI1 651 aa10.08□□□□□ -0.8
AC012409.1-202ENST00000558449 AXIN1O15169 862 aa10.07□□□□□ -0.8
AC012409.1-202ENST00000558449 EGFRP00533 1210 aa10.07□□□□□ -0.8
AC012409.1-202ENST00000558449 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.07□□□□□ -0.8
AC012409.1-202ENST00000558449 PKDCCQ504Y2 493 aa10.07□□□□□ -0.8
AC012409.1-202ENST00000558449 PI16Q6UXB8 463 aa10.07□□□□□ -0.8
AC012409.1-202ENST00000558449 EPS8L3Q8TE67 593 aaKnown RBP10.07□□□□□ -0.8
AC012409.1-202ENST00000558449 RNF34Q969K3 372 aa10.07□□□□□ -0.8
AC012409.1-202ENST00000558449 METTL5Q9NRN9 209 aaKnown RBP10.07□□□□□ -0.8
AC012409.1-202ENST00000558449 LOC105371045A0A1W2PR82 267 aa10.06□□□□□ -0.8
AC012409.1-202ENST00000558449 CTSHP09668 335 aa10.06□□□□□ -0.8
AC012409.1-202ENST00000558449 EIF4BP23588 611 aaKnown RBP10.06□□□□□ -0.8
AC012409.1-202ENST00000558449 FANCCQ00597 558 aa10.06□□□□□ -0.8
AC012409.1-202ENST00000558449 SAMD5Q5TGI4 173 aa10.06□□□□□ -0.8
AC012409.1-202ENST00000558449 METTL16Q86W50 562 aaKnown RBP10.06□□□□□ -0.8
AC012409.1-202ENST00000558449 C11orf16Q9NQ32 467 aa10.06□□□□□ -0.8
AC012409.1-202ENST00000558449 NLRP2Q9NX02 1062 aa10.06□□□□□ -0.8
AC012409.1-202ENST00000558449 IRS1P35568 1242 aa10.05□□□□□ -0.8
AC012409.1-202ENST00000558449 EFHC2Q5JST6 749 aa10.05□□□□□ -0.8
AC012409.1-202ENST00000558449 NLRP13Q86W25 1043 aa10.05□□□□□ -0.8
AC012409.1-202ENST00000558449 C1orf127Q8N9H9 656 aa10.05□□□□□ -0.8
AC012409.1-202ENST00000558449 CNTN3Q9P232 1028 aa10.05□□□□□ -0.8
AC012409.1-202ENST00000558449 SENP3-EIF4A1A0A087X0R7 540 aa10.04□□□□□ -0.8
AC012409.1-202ENST00000558449 GIPC1O14908 333 aa10.04□□□□□ -0.8
AC012409.1-202ENST00000558449 POLR3DP05423 398 aaPredicted RBP10.04□□□□□ -0.8
AC012409.1-202ENST00000558449 ZNF76P36508 570 aa10.04□□□□□ -0.8
AC012409.1-202ENST00000558449 RAD51AP2Q09MP3 1159 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms