RNA–Protein interactions for RNA: ENST00000558440.5

ZEB1-211, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 886 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-211ENST00000558440 FAM50AQ14320 339 aaKnown RBP9.27□□□□□ -0.93
ZEB1-211ENST00000558440 SUZ12Q15022 739 aaKnown RBP9.27□□□□□ -0.93
ZEB1-211ENST00000558440 PCDHB11Q9Y5F2 797 aa9.27□□□□□ -0.93
ZEB1-211ENST00000558440 CDK12Q9NYV4 1490 aaPredicted RBP9.27□□□□□ -0.93
ZEB1-211ENST00000558440 IQGAP3Q86VI3 1631 aa9.27□□□□□ -0.93
ZEB1-211ENST00000558440 IRF5Q13568 498 aa9.26□□□□□ -0.93
ZEB1-211ENST00000558440 ASXL1Q8IXJ9 1541 aa9.26□□□□□ -0.93
ZEB1-211ENST00000558440 XRN1Q8IZH2 1706 aaKnown RBP9.25□□□□□ -0.93
ZEB1-211ENST00000558440 EP400Q96L91 3159 aa9.25□□□□□ -0.93
ZEB1-211ENST00000558440 DCCP43146 1447 aa9.25□□□□□ -0.93
ZEB1-211ENST00000558440 SCTRP47872 440 aa9.25□□□□□ -0.93
ZEB1-211ENST00000558440 BRINP3Q76B58 766 aa9.25□□□□□ -0.93
ZEB1-211ENST00000558440 NANOS1Q8WY41 292 aaKnown RBP9.25□□□□□ -0.93
ZEB1-211ENST00000558440 AMOTL2Q9Y2J4 779 aa9.25□□□□□ -0.93
ZEB1-211ENST00000558440 AFF2P51816 1311 aa9.25□□□□□ -0.93
ZEB1-211ENST00000558440 SPHKAPQ2M3C7 1700 aa9.25□□□□□ -0.93
ZEB1-211ENST00000558440 RNF144AP50876 292 aaPredicted RBP9.24□□□□□ -0.93
ZEB1-211ENST00000558440 CYP2U1Q7Z449 544 aa9.24□□□□□ -0.93
ZEB1-211ENST00000558440 CEP126Q9P2H0 1117 aa9.24□□□□□ -0.93
ZEB1-211ENST00000558440 NRXN3Q9Y4C0 1643 aa9.23□□□□□ -0.93
ZEB1-211ENST00000558440 SENP3-EIF4A1A0A087X0R7 540 aa9.23□□□□□ -0.93
ZEB1-211ENST00000558440 GPC1P35052 558 aa9.23□□□□□ -0.93
ZEB1-211ENST00000558440 EIF4G2P78344 907 aaKnown RBP eCLIP9.23□□□□□ -0.93
ZEB1-211ENST00000558440 MCM6Q14566 821 aa9.23□□□□□ -0.93
ZEB1-211ENST00000558440 LYSMD3Q7Z3D4 306 aa9.23□□□□□ -0.93
ZEB1-211ENST00000558440 PTPRUQ92729 1446 aa9.22□□□□□ -0.93
ZEB1-211ENST00000558440 SETD5Q9C0A6 1442 aa9.22□□□□□ -0.93
ZEB1-211ENST00000558440 NALCNQ8IZF0 1738 aa9.22□□□□□ -0.93
ZEB1-211ENST00000558440 KIF1BO60333 1816 aa9.22□□□□□ -0.93
ZEB1-211ENST00000558440 SETBP1Q9Y6X0 1596 aa9.22□□□□□ -0.93
ZEB1-211ENST00000558440 A0A1W2PRU2 124 aa9.22□□□□□ -0.93
ZEB1-211ENST00000558440 TRAK2O60296 914 aa9.22□□□□□ -0.93
ZEB1-211ENST00000558440 ITGA6P23229 1130 aa9.22□□□□□ -0.93
ZEB1-211ENST00000558440 GPR161Q8N6U8 529 aaKnown RBP9.22□□□□□ -0.93
ZEB1-211ENST00000558440 LRRC59Q96AG4 307 aaKnown RBP9.22□□□□□ -0.93
ZEB1-211ENST00000558440 OSBPL3Q9H4L5 887 aa9.22□□□□□ -0.93
ZEB1-211ENST00000558440 GDPD2Q9HCC8 539 aa9.22□□□□□ -0.93
ZEB1-211ENST00000558440 MST1RQ04912 1400 aa9.22□□□□□ -0.93
ZEB1-211ENST00000558440 MEN1O00255 615 aa9.21□□□□□ -0.94
ZEB1-211ENST00000558440 C8orf37Q96NL8 207 aa9.21□□□□□ -0.94
ZEB1-211ENST00000558440 CCDC85AQ96PX6 553 aaPredicted RBP9.21□□□□□ -0.94
ZEB1-211ENST00000558440 RGS12O14924 1447 aa9.21□□□□□ -0.94
ZEB1-211ENST00000558440 RBM6P78332 1123 aaKnown RBP9.2□□□□□ -0.94
ZEB1-211ENST00000558440 VAC14Q08AM6 782 aa9.2□□□□□ -0.94
ZEB1-211ENST00000558440 QTRT2Q9H974 415 aaKnown RBP9.2□□□□□ -0.94
ZEB1-211ENST00000558440 NUP155O75694 1391 aa9.2□□□□□ -0.94
ZEB1-211ENST00000558440 ABL2P42684 1182 aa9.19□□□□□ -0.94
ZEB1-211ENST00000558440 KRT76Q01546 638 aa9.19□□□□□ -0.94
ZEB1-211ENST00000558440 CLN3Q13286 438 aa9.19□□□□□ -0.94
ZEB1-211ENST00000558440 ZNF326Q5BKZ1 582 aaKnown RBP9.19□□□□□ -0.94
ZEB1-211ENST00000558440 PRICKLE2Q7Z3G6 844 aa9.19□□□□□ -0.94
ZEB1-211ENST00000558440 ROCK1Q13464 1354 aa9.19□□□□□ -0.94
ZEB1-211ENST00000558440 PNPLA6Q8IY17 1366 aa9.19□□□□□ -0.94
ZEB1-211ENST00000558440 ADGRL3Q9HAR2 1447 aa9.19□□□□□ -0.94
ZEB1-211ENST00000558440 LAMC1P11047 1609 aa9.18□□□□□ -0.94
ZEB1-211ENST00000558440 KCNMA1Q12791 1236 aa9.18□□□□□ -0.94
ZEB1-211ENST00000558440 PHTF2Q8N3S3 785 aa9.18□□□□□ -0.94
ZEB1-211ENST00000558440 KCTD17Q8N5Z5 321 aa9.18□□□□□ -0.94
ZEB1-211ENST00000558440 NGLY1Q96IV0 654 aa9.18□□□□□ -0.94
ZEB1-211ENST00000558440 NLRP3Q96P20 1036 aa9.18□□□□□ -0.94
ZEB1-211ENST00000558440 CDCA7Q9BWT1 371 aaPredicted RBP9.18□□□□□ -0.94
ZEB1-211ENST00000558440 ARHGEF10LQ9HCE6 1279 aa9.18□□□□□ -0.94
ZEB1-211ENST00000558440 MARF1Q9Y4F3 1742 aaKnown RBP9.17□□□□□ -0.94
ZEB1-211ENST00000558440 METP08581 1390 aa9.17□□□□□ -0.94
ZEB1-211ENST00000558440 ATAD2Q6PL18 1390 aa9.17□□□□□ -0.94
ZEB1-211ENST00000558440 CDC14CA4D256 554 aa9.17□□□□□ -0.94
ZEB1-211ENST00000558440 ADAMTS2O95450 1211 aa9.17□□□□□ -0.94
ZEB1-211ENST00000558440 MYCP01106 439 aaPredicted RBP9.17□□□□□ -0.94
ZEB1-211ENST00000558440 RHOQP17081 205 aa9.17□□□□□ -0.94
ZEB1-211ENST00000558440 WASHC4Q2M389 1173 aa9.17□□□□□ -0.94
ZEB1-211ENST00000558440 SV2AQ7L0J3 742 aa9.17□□□□□ -0.94
ZEB1-211ENST00000558440 VWA5B2Q8N398 1253 aa9.17□□□□□ -0.94
ZEB1-211ENST00000558440 DDX17Q92841 729 aaKnown RBP9.17□□□□□ -0.94
ZEB1-211ENST00000558440 COL25A1Q9BXS0 654 aaPredicted RBP9.17□□□□□ -0.94
ZEB1-211ENST00000558440 GNRH1P01148 92 aa9.16□□□□□ -0.94
ZEB1-211ENST00000558440 SLFNL1Q499Z3 407 aa9.16□□□□□ -0.94
ZEB1-211ENST00000558440 CNTNAP3BQ96NU0 1288 aa9.16□□□□□ -0.94
ZEB1-211ENST00000558440 CNTNAP3Q9BZ76 1288 aa9.16□□□□□ -0.94
ZEB1-211ENST00000558440 GRIP2Q9C0E4 1043 aa9.16□□□□□ -0.94
ZEB1-211ENST00000558440 DOLKQ9UPQ8 538 aa9.16□□□□□ -0.94
ZEB1-211ENST00000558440 CLTCL1P53675 1640 aa9.16□□□□□ -0.94
ZEB1-211ENST00000558440 NEXMIFQ5QGS0 1516 aa9.15□□□□□ -0.94
ZEB1-211ENST00000558440 SLC27A3Q5K4L6 730 aa9.15□□□□□ -0.94
ZEB1-211ENST00000558440 RNF135Q8IUD6 432 aa9.15□□□□□ -0.94
ZEB1-211ENST00000558440 COL22A1Q8NFW1 1626 aaPredicted RBP9.15□□□□□ -0.94
ZEB1-211ENST00000558440 C1orf167Q5SNV9 1468 aa9.15□□□□□ -0.95
ZEB1-211ENST00000558440 ITGAEP38570 1179 aa9.14□□□□□ -0.95
ZEB1-211ENST00000558440 TSGA10IPQ3SY00 556 aa9.14□□□□□ -0.95
ZEB1-211ENST00000558440 RNFT1Q5M7Z0 435 aa9.14□□□□□ -0.95
ZEB1-211ENST00000558440 RAB6BQ9NRW1 208 aa9.14□□□□□ -0.95
ZEB1-211ENST00000558440 CUEDC1Q9NWM3 386 aaPredicted RBP9.14□□□□□ -0.95
ZEB1-211ENST00000558440 USP21Q9UK80 565 aa9.14□□□□□ -0.95
ZEB1-211ENST00000558440 TRPC5Q9UL62 973 aaPredicted RBP9.14□□□□□ -0.95
ZEB1-211ENST00000558440 COG6Q9Y2V7 657 aa9.14□□□□□ -0.95
ZEB1-211ENST00000558440 PTCH1Q13635 1447 aa9.14□□□□□ -0.95
ZEB1-211ENST00000558440 SPATA31C2B4DYI2 1134 aa9.13□□□□□ -0.95
ZEB1-211ENST00000558440 IL2RAP01589 272 aa9.13□□□□□ -0.95
ZEB1-211ENST00000558440 POU4F2Q12837 409 aa9.13□□□□□ -0.95
ZEB1-211ENST00000558440 CNKSR1Q969H4 720 aa9.13□□□□□ -0.95
ZEB1-211ENST00000558440 ESYT1Q9BSJ8 1104 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms