RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 GGNBP2Q9H3C7 697 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 BAG2O95816 211 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 GNPTABQ3T906 1256 aa4.23□□□□□ -1.73
ATXN3-248ENST00000558190 SND1Q7KZF4 910 aaKnown RBP eCLIP4.23□□□□□ -1.73
ATXN3-248ENST00000558190 FKBP4Q02790 459 aaKnown RBP eCLIP4.23□□□□□ -1.73
ATXN3-248ENST00000558190 ACTN3Q08043 901 aaPredicted RBP4.23□□□□□ -1.73
ATXN3-248ENST00000558190 TEFQ10587 303 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 CCDC8Q9H0W5 538 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-248ENST00000558190 RLBP1P12271 317 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 STX1AQ16623 288 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 PIK3R5Q8WYR1 880 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 ADAM21Q9UKJ8 722 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 KLHL34Q8N239 644 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 TMPOP42166 694 aaKnown RBP4.22□□□□□ -1.73
ATXN3-248ENST00000558190 CDK5RAP3Q96JB5 506 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 SWAP70Q9UH65 585 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 TBC1D2BQ9UPU7 963 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 ZNF711Q9Y462 761 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 CCDC171Q6TFL3 1326 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 FGFR1OPO95684 399 aaKnown RBP4.22□□□□□ -1.73
ATXN3-248ENST00000558190 FANCCQ00597 558 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 C6orf163Q5TEZ5 329 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 SAAL1Q96ER3 474 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 PPP1R7Q15435 360 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 TRIM22Q8IYM9 498 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 GSDMBQ8TAX9 411 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 THUMPD2Q9BTF0 503 aaKnown RBP4.22□□□□□ -1.73
ATXN3-248ENST00000558190 SMIM23A6NLE4 172 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 GUCY2CP25092 1073 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 MICAL1Q8TDZ2 1067 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 AKR1B15C9JRZ8 316 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-248ENST00000558190 BMP2KLQ5H9B9 411 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 PLEKHM2Q8IWE5 1019 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 SRGAP3O43295 1099 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 SLFN14P0C7P3 912 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 KRT32Q14532 448 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 CABS1Q96KC9 395 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 CXorf56Q9H5V9 222 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.22□□□□□ -1.73
ATXN3-248ENST00000558190 BRMS1Q9HCU9 246 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 FAM184BQ9ULE4 1060 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 GNGT1P63211 74 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 TMEM132EQ6IEE7 984 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 IFT74Q96LB3 600 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 DCTPP1Q9H773 170 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 SAMM50Q9Y512 469 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 ATRXP46100 2492 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 PPP1R12AO14974 1030 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-248ENST00000558190 KRT83P78385 493 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 SSRP1Q08945 709 aaKnown RBP4.22□□□□□ -1.73
ATXN3-248ENST00000558190 KANK3Q6NY19 840 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 TSPYL2Q9H2G4 693 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-248ENST00000558190 OAS2P29728 719 aaKnown RBP4.22□□□□□ -1.73
ATXN3-248ENST00000558190 ECM2O94769 699 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-248ENST00000558190 STX17P56962 302 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 DUSP27Q5VZP5 1158 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 TBC1D31Q96DN5 1066 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 PYCARDQ9ULZ3 195 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 AFMP43652 599 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 ATP11AP98196 1134 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 A0A1W2PRG0 241 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 FBXO18Q8NFZ0 1043 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 COG3Q96JB2 828 aa4.22□□□□□ -1.73
ATXN3-248ENST00000558190 GIGYF2Q6Y7W6 1299 aaKnown RBP4.22□□□□□ -1.73
ATXN3-248ENST00000558190 ZMYND10O75800 440 aa4.21□□□□□ -1.73
ATXN3-248ENST00000558190 VPS41P49754 854 aa4.21□□□□□ -1.73
ATXN3-248ENST00000558190 CHMP4BP1P59074 171 aa4.21□□□□□ -1.73
ATXN3-248ENST00000558190 LRMPQ12912 555 aa4.21□□□□□ -1.73
ATXN3-248ENST00000558190 LUC7L2Q9Y383 392 aaKnown RBP4.21□□□□□ -1.73
ATXN3-248ENST00000558190 TAOK3Q9H2K8 898 aa4.21□□□□□ -1.73
ATXN3-248ENST00000558190 GOLGA6CA6NDK9 693 aa4.21□□□□□ -1.73
ATXN3-248ENST00000558190 DDX58O95786 925 aaKnown RBP4.21□□□□□ -1.73
ATXN3-248ENST00000558190 GOLGA6DP0CG33 693 aa4.21□□□□□ -1.73
ATXN3-248ENST00000558190 RFC1P35251 1148 aaPredicted RBP4.21□□□□□ -1.73
ATXN3-248ENST00000558190 KIAA1524Q8TCG1 905 aa4.21□□□□□ -1.73
ATXN3-248ENST00000558190 GOLGA6AQ9NYA3 693 aa4.21□□□□□ -1.73
ATXN3-248ENST00000558190 CFAP57Q96MR6 1250 aa4.21□□□□□ -1.73
ATXN3-248ENST00000558190 PRDM4Q9UKN5 801 aa4.21□□□□□ -1.73
ATXN3-248ENST00000558190 GCOM1H8Y6P7 765 aaPredicted RBP4.21□□□□□ -1.73
ATXN3-248ENST00000558190 MYZAPP0CAP1 466 aa4.21□□□□□ -1.73
ATXN3-248ENST00000558190 CCDC158Q5M9N0 1113 aa4.21□□□□□ -1.74
ATXN3-248ENST00000558190 ACTN2P35609 894 aa4.21□□□□□ -1.74
ATXN3-248ENST00000558190 RASSF2P50749 326 aa4.21□□□□□ -1.74
ATXN3-248ENST00000558190 CEP85LQ5SZL2 805 aa4.21□□□□□ -1.74
ATXN3-248ENST00000558190 PPANQ9NQ55 473 aaKnown RBP4.21□□□□□ -1.74
ATXN3-248ENST00000558190 SNCBQ16143 134 aa4.21□□□□□ -1.74
ATXN3-248ENST00000558190 TACC1O75410 805 aa4.21□□□□□ -1.74
ATXN3-248ENST00000558190 ETF1P62495 437 aaKnown RBP4.21□□□□□ -1.74
ATXN3-248ENST00000558190 NUP155O75694 1391 aa4.21□□□□□ -1.74
ATXN3-248ENST00000558190 RANBP1P43487 201 aa4.21□□□□□ -1.74
ATXN3-248ENST00000558190 VCXQ9H320 206 aa4.21□□□□□ -1.74
ATXN3-248ENST00000558190 WASF1Q92558 559 aa4.21□□□□□ -1.74
ATXN3-248ENST00000558190 C8orf76Q96K31 380 aa4.21□□□□□ -1.74
ATXN3-248ENST00000558190 CAPS2Q9BXY5 557 aa4.21□□□□□ -1.74
ATXN3-248ENST00000558190 CABP1Q9NZU7 370 aa4.21□□□□□ -1.74
ATXN3-248ENST00000558190 STK38LQ9Y2H1 464 aa4.21□□□□□ -1.74
ATXN3-248ENST00000558190 KIF15Q9NS87 1388 aa4.21□□□□□ -1.74
ATXN3-248ENST00000558190 CCDC96Q2M329 555 aa4.21□□□□□ -1.74
ATXN3-248ENST00000558190 CWC25Q9NXE8 425 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-248ENST00000558190 FEZ2Q9UHY8 353 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms