RNA–Protein interactions for RNA: ENST00000558126.1

LYSMD2-203, Transcript of LysM domain containing 2, humanhuman

TSL 5 BASIC

Gene LYSMD2, Length 775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-203ENST00000558126 ZNF496Q96IT1 587 aaPredicted RBP14.01□□□□□ -0.17
LYSMD2-203ENST00000558126 AFDNP55196 1824 aaKnown RBP14□□□□□ -0.17
LYSMD2-203ENST00000558126 IL17REQ8NFR9 667 aa14□□□□□ -0.17
LYSMD2-203ENST00000558126 TAOK3Q9H2K8 898 aa14□□□□□ -0.17
LYSMD2-203ENST00000558126 DLEC1Q9Y238 1755 aa13.99□□□□□ -0.17
LYSMD2-203ENST00000558126 GNAT3A8MTJ3 354 aa13.99□□□□□ -0.17
LYSMD2-203ENST00000558126 C21orf2O43822 256 aa13.99□□□□□ -0.17
LYSMD2-203ENST00000558126 SRGNP10124 158 aa13.99□□□□□ -0.17
LYSMD2-203ENST00000558126 TEFQ10587 303 aa13.99□□□□□ -0.17
LYSMD2-203ENST00000558126 CLEC4GQ6UXB4 293 aa13.99□□□□□ -0.17
LYSMD2-203ENST00000558126 BICDL1Q6ZP65 573 aa13.99□□□□□ -0.17
LYSMD2-203ENST00000558126 SETDB2Q96T68 719 aa13.99□□□□□ -0.17
LYSMD2-203ENST00000558126 NPC1L1Q9UHC9 1359 aa13.98□□□□□ -0.17
LYSMD2-203ENST00000558126 IQCA1LA6NCM1 817 aa13.98□□□□□ -0.17
LYSMD2-203ENST00000558126 CAMTA2O94983 1202 aa13.98□□□□□ -0.17
LYSMD2-203ENST00000558126 NPM2Q86SE8 214 aaKnown RBP13.98□□□□□ -0.17
LYSMD2-203ENST00000558126 MASTLQ96GX5 879 aa13.98□□□□□ -0.17
LYSMD2-203ENST00000558126 FMNL2Q96PY5 1086 aa13.98□□□□□ -0.17
LYSMD2-203ENST00000558126 TBC1D2BQ9UPU7 963 aa13.98□□□□□ -0.17
LYSMD2-203ENST00000558126 CEMIPQ8WUJ3 1361 aa13.97□□□□□ -0.17
LYSMD2-203ENST00000558126 KIF7Q2M1P5 1343 aa13.97□□□□□ -0.17
LYSMD2-203ENST00000558126 KLRG2A4D1S0 409 aaPredicted RBP13.97□□□□□ -0.17
LYSMD2-203ENST00000558126 CNBD1Q8NA66 436 aa13.97□□□□□ -0.17
LYSMD2-203ENST00000558126 C7orf43Q8WVR3 580 aa13.97□□□□□ -0.17
LYSMD2-203ENST00000558126 ST5P78524 1137 aa13.96□□□□□ -0.17
LYSMD2-203ENST00000558126 PRPF40BQ6NWY9 871 aaKnown RBP13.96□□□□□ -0.17
LYSMD2-203ENST00000558126 MICALL2Q8IY33 904 aa13.96□□□□□ -0.17
LYSMD2-203ENST00000558126 FBXO22Q8NEZ5 403 aa13.96□□□□□ -0.17
LYSMD2-203ENST00000558126 PCGF6Q9BYE7 350 aa13.96□□□□□ -0.17
LYSMD2-203ENST00000558126 UBR2Q8IWV8 1755 aa13.96□□□□□ -0.18
LYSMD2-203ENST00000558126 PASKQ96RG2 1323 aa13.95□□□□□ -0.18
LYSMD2-203ENST00000558126 DDNO94850 711 aaPredicted RBP13.95□□□□□ -0.18
LYSMD2-203ENST00000558126 LDHDQ86WU2 507 aa13.95□□□□□ -0.18
LYSMD2-203ENST00000558126 A1BGP04217 495 aa13.94□□□□□ -0.18
LYSMD2-203ENST00000558126 DZIP3Q86Y13 1208 aaKnown RBP13.94□□□□□ -0.18
LYSMD2-203ENST00000558126 MFRPQ9BY79 579 aa13.94□□□□□ -0.18
LYSMD2-203ENST00000558126 PRDM10Q9NQV6 1147 aa13.94□□□□□ -0.18
LYSMD2-203ENST00000558126 CNTNAP1P78357 1384 aa13.94□□□□□ -0.18
LYSMD2-203ENST00000558126 BTBD11A6QL63 1104 aa13.93□□□□□ -0.18
LYSMD2-203ENST00000558126 NPR1P16066 1061 aa13.93□□□□□ -0.18
LYSMD2-203ENST00000558126 CCDC93Q567U6 631 aa13.93□□□□□ -0.18
LYSMD2-203ENST00000558126 SPNS2Q8IVW8 549 aa13.93□□□□□ -0.18
LYSMD2-203ENST00000558126 TAF1DQ9H5J8 278 aaPredicted RBP13.93□□□□□ -0.18
LYSMD2-203ENST00000558126 ZNF652Q9Y2D9 606 aa13.93□□□□□ -0.18
LYSMD2-203ENST00000558126 FER1L6Q2WGJ9 1857 aa13.93□□□□□ -0.18
LYSMD2-203ENST00000558126 COL3A1P02461 1466 aaPredicted RBP13.93□□□□□ -0.18
LYSMD2-203ENST00000558126 MMRN1Q13201 1228 aa13.92□□□□□ -0.18
LYSMD2-203ENST00000558126 CC2D1BQ5T0F9 858 aaKnown RBP13.92□□□□□ -0.18
LYSMD2-203ENST00000558126 TPTE2Q6XPS3 522 aa13.92□□□□□ -0.18
LYSMD2-203ENST00000558126 RTKN2Q8IZC4 609 aa13.92□□□□□ -0.18
LYSMD2-203ENST00000558126 CCDC24Q8N4L8 307 aa13.92□□□□□ -0.18
LYSMD2-203ENST00000558126 ZNF330Q9Y3S2 320 aaPredicted RBP13.92□□□□□ -0.18
LYSMD2-203ENST00000558126 USP16Q9Y5T5 823 aa13.92□□□□□ -0.18
LYSMD2-203ENST00000558126 ANKRD31Q8N7Z5 1873 aa13.91□□□□□ -0.18
LYSMD2-203ENST00000558126 TIAM2Q8IVF5 1701 aa13.91□□□□□ -0.18
LYSMD2-203ENST00000558126 U2SURPO15042 1029 aaKnown RBP13.91□□□□□ -0.18
LYSMD2-203ENST00000558126 NPHP1O15259 732 aa13.91□□□□□ -0.18
LYSMD2-203ENST00000558126 ITGBL1O95965 494 aaPredicted RBP13.91□□□□□ -0.18
LYSMD2-203ENST00000558126 SNRPA1P09661 255 aaKnown RBP13.91□□□□□ -0.18
LYSMD2-203ENST00000558126 FKBP4Q02790 459 aaKnown RBP eCLIP13.91□□□□□ -0.18
LYSMD2-203ENST00000558126 NBPF5PQ86XG9 351 aaPredicted RBP13.91□□□□□ -0.18
LYSMD2-203ENST00000558126 MKRN1Q9UHC7 482 aaKnown RBP13.91□□□□□ -0.18
LYSMD2-203ENST00000558126 SCN7AQ01118 1682 aa13.91□□□□□ -0.18
LYSMD2-203ENST00000558126 DICER1Q9UPY3 1922 aaKnown RBP13.9□□□□□ -0.18
LYSMD2-203ENST00000558126 TMEM88BA6NKF7 163 aa13.9□□□□□ -0.18
LYSMD2-203ENST00000558126 PNMA8AQ86V59 439 aaPredicted RBP13.9□□□□□ -0.18
LYSMD2-203ENST00000558126 FZD9O00144 591 aa13.89□□□□□ -0.19
LYSMD2-203ENST00000558126 KCNQ3O43525 872 aa13.89□□□□□ -0.19
LYSMD2-203ENST00000558126 HTATSF1O43719 755 aaKnown RBP13.89□□□□□ -0.19
LYSMD2-203ENST00000558126 ALDH1B1P30837 517 aa13.89□□□□□ -0.19
LYSMD2-203ENST00000558126 PHACTR3Q96KR7 559 aa13.89□□□□□ -0.19
LYSMD2-203ENST00000558126 RSPH6AQ9H0K4 717 aa13.89□□□□□ -0.19
LYSMD2-203ENST00000558126 FOXN1O15353 648 aa13.88□□□□□ -0.19
LYSMD2-203ENST00000558126 CTCFP49711 727 aaPredicted RBP13.88□□□□□ -0.19
LYSMD2-203ENST00000558126 GRIPAP1Q4V328 841 aa13.88□□□□□ -0.19
LYSMD2-203ENST00000558126 HS3ST6Q96QI5 342 aa13.88□□□□□ -0.19
LYSMD2-203ENST00000558126 WBP1LQ9NX94 342 aa13.88□□□□□ -0.19
LYSMD2-203ENST00000558126 HACL1Q9UJ83 578 aa13.88□□□□□ -0.19
LYSMD2-203ENST00000558126 CCDC88AQ3V6T2 1871 aa13.88□□□□□ -0.19
LYSMD2-203ENST00000558126 SLX4Q8IY92 1834 aa13.87□□□□□ -0.19
LYSMD2-203ENST00000558126 PRKAR2BP31323 418 aa13.87□□□□□ -0.19
LYSMD2-203ENST00000558126 VEGFBP49765 207 aa13.87□□□□□ -0.19
LYSMD2-203ENST00000558126 CC2D2BQ6DHV5 1058 aa13.87□□□□□ -0.19
LYSMD2-203ENST00000558126 CFAP53Q96M91 514 aa13.87□□□□□ -0.19
LYSMD2-203ENST00000558126 PSMD1Q99460 953 aa13.87□□□□□ -0.19
LYSMD2-203ENST00000558126 NIP7Q9Y221 180 aaKnown RBP eCLIP13.87□□□□□ -0.19
LYSMD2-203ENST00000558126 NUDCQ9Y266 331 aa13.87□□□□□ -0.19
LYSMD2-203ENST00000558126 COL11A2P13942 1736 aaPredicted RBP13.87□□□□□ -0.19
LYSMD2-203ENST00000558126 RASSF10A6NK89 507 aa13.86□□□□□ -0.19
LYSMD2-203ENST00000558126 EPHX2P34913 555 aa13.86□□□□□ -0.19
LYSMD2-203ENST00000558126 CRY2Q49AN0 593 aa13.86□□□□□ -0.19
LYSMD2-203ENST00000558126 HS6ST3Q8IZP7 471 aa13.86□□□□□ -0.19
LYSMD2-203ENST00000558126 GPC2Q8N158 579 aa13.86□□□□□ -0.19
LYSMD2-203ENST00000558126 RTF1Q92541 710 aaKnown RBP13.86□□□□□ -0.19
LYSMD2-203ENST00000558126 AIDAQ96BJ3 306 aa13.86□□□□□ -0.19
LYSMD2-203ENST00000558126 SIPA1L3O60292 1781 aaPredicted RBP13.86□□□□□ -0.19
LYSMD2-203ENST00000558126 SCN4AP35499 1836 aa13.85□□□□□ -0.19
LYSMD2-203ENST00000558126 VIRMAQ69YN4 1812 aaKnown RBP13.85□□□□□ -0.19
LYSMD2-203ENST00000558126 FAM205CA6NFA0 338 aa13.85□□□□□ -0.19
LYSMD2-203ENST00000558126 NBPF26B4DH59 902 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms