RNA–Protein interactions for RNA: ENST00000558016.1

IDH3A-204, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-204ENST00000558016 PDZRN3Q9UPQ7 1066 aa8.54□□□□□ -1.04
IDH3A-204ENST00000558016 SPG7Q9UQ90 795 aa8.54□□□□□ -1.04
IDH3A-204ENST00000558016 RGPD2P0DJD1 1756 aa8.53□□□□□ -1.04
IDH3A-204ENST00000558016 GCGRP47871 477 aa8.53□□□□□ -1.04
IDH3A-204ENST00000558016 MAP2K5Q13163 448 aa8.53□□□□□ -1.04
IDH3A-204ENST00000558016 EMID1Q96A84 441 aaPredicted RBP8.53□□□□□ -1.04
IDH3A-204ENST00000558016 CCNL1Q9UK58 526 aaPredicted RBP8.53□□□□□ -1.04
IDH3A-204ENST00000558016 KIF7Q2M1P5 1343 aa8.53□□□□□ -1.04
IDH3A-204ENST00000558016 ATP6V1AP38606 617 aa8.52□□□□□ -1.05
IDH3A-204ENST00000558016 SLC15A2Q16348 729 aa8.52□□□□□ -1.05
IDH3A-204ENST00000558016 MORN1Q5T089 497 aa8.52□□□□□ -1.05
IDH3A-204ENST00000558016 MPRIPQ6WCQ1 1025 aa8.52□□□□□ -1.05
IDH3A-204ENST00000558016 TFCP2L1Q9NZI6 479 aa8.52□□□□□ -1.05
IDH3A-204ENST00000558016 WASHC2AQ641Q2 1341 aa8.52□□□□□ -1.05
IDH3A-204ENST00000558016 KAT6BQ8WYB5 2073 aa8.51□□□□□ -1.05
IDH3A-204ENST00000558016 IRF6O14896 467 aa8.51□□□□□ -1.05
IDH3A-204ENST00000558016 POLD1P28340 1107 aa8.51□□□□□ -1.05
IDH3A-204ENST00000558016 SLC27A3Q5K4L6 730 aa8.51□□□□□ -1.05
IDH3A-204ENST00000558016 CC2D1BQ5T0F9 858 aaKnown RBP8.51□□□□□ -1.05
IDH3A-204ENST00000558016 TRAF7Q6Q0C0 670 aa8.51□□□□□ -1.05
IDH3A-204ENST00000558016 POLKQ9UBT6 870 aa8.51□□□□□ -1.05
IDH3A-204ENST00000558016 SHANK3Q9BYB0 1731 aa8.51□□□□□ -1.05
IDH3A-204ENST00000558016 PALLDQ8WX93 1383 aa8.5□□□□□ -1.05
IDH3A-204ENST00000558016 LCE2BO14633 110 aa8.5□□□□□ -1.05
IDH3A-204ENST00000558016 EIF4A2Q14240 407 aaKnown RBP8.5□□□□□ -1.05
IDH3A-204ENST00000558016 ZNF827Q17R98 1081 aa8.5□□□□□ -1.05
IDH3A-204ENST00000558016 C1orf141Q5JVX7 400 aa8.5□□□□□ -1.05
IDH3A-204ENST00000558016 SPRYD7Q5W111 196 aa8.5□□□□□ -1.05
IDH3A-204ENST00000558016 LIAT1Q6ZQX7 453 aa8.5□□□□□ -1.05
IDH3A-204ENST00000558016 AK7Q96M32 723 aa8.5□□□□□ -1.05
IDH3A-204ENST00000558016 MTFR1LQ9H019 292 aa8.5□□□□□ -1.05
IDH3A-204ENST00000558016 TMOD3Q9NYL9 352 aa8.5□□□□□ -1.05
IDH3A-204ENST00000558016 SLC27A5Q9Y2P5 690 aa8.5□□□□□ -1.05
IDH3A-204ENST00000558016 CASZ1Q86V15 1759 aa8.49□□□□□ -1.05
IDH3A-204ENST00000558016 KCNQ4P56696 695 aa8.49□□□□□ -1.05
IDH3A-204ENST00000558016 MDM2Q00987 491 aaPredicted RBP8.49□□□□□ -1.05
IDH3A-204ENST00000558016 ZNF530Q6P9A1 599 aaPredicted RBP8.49□□□□□ -1.05
IDH3A-204ENST00000558016 SMARCC1Q92922 1105 aaPredicted RBP8.49□□□□□ -1.05
IDH3A-204ENST00000558016 PAPPAQ13219 1627 aa8.49□□□□□ -1.05
IDH3A-204ENST00000558016 PKD1L3Q7Z443 1732 aa8.49□□□□□ -1.05
IDH3A-204ENST00000558016 CYP27B1O15528 508 aa8.48□□□□□ -1.05
IDH3A-204ENST00000558016 FMNL1O95466 1100 aaPredicted RBP8.48□□□□□ -1.05
IDH3A-204ENST00000558016 HMGB2P26583 209 aaKnown RBP8.48□□□□□ -1.05
IDH3A-204ENST00000558016 PLA2G2CQ5R387 149 aa8.48□□□□□ -1.05
IDH3A-204ENST00000558016 ZNF598Q86UK7 904 aaKnown RBP8.48□□□□□ -1.05
IDH3A-204ENST00000558016 IFNL2Q8IZJ0 200 aa8.48□□□□□ -1.05
IDH3A-204ENST00000558016 PDGFDQ9GZP0 370 aaPredicted RBP8.48□□□□□ -1.05
IDH3A-204ENST00000558016 HSP90AB1P08238 724 aaKnown RBP8.47□□□□□ -1.05
IDH3A-204ENST00000558016 PLEKHO1Q53GL0 409 aaPredicted RBP8.47□□□□□ -1.05
IDH3A-204ENST00000558016 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.47□□□□□ -1.05
IDH3A-204ENST00000558016 CCDC102AQ96A19 550 aa8.47□□□□□ -1.05
IDH3A-204ENST00000558016 THAP11Q96EK4 314 aa8.47□□□□□ -1.05
IDH3A-204ENST00000558016 LRRC4BQ9NT99 713 aa8.47□□□□□ -1.05
IDH3A-204ENST00000558016 IGSF1Q8N6C5 1336 aa8.47□□□□□ -1.05
IDH3A-204ENST00000558016 MAP2P11137 1827 aaKnown RBP8.47□□□□□ -1.05
IDH3A-204ENST00000558016 NCAPD2Q15021 1401 aa8.46□□□□□ -1.05
IDH3A-204ENST00000558016 TOGARAM1Q9Y4F4 1720 aa8.46□□□□□ -1.05
IDH3A-204ENST00000558016 U2SURPO15042 1029 aaKnown RBP8.46□□□□□ -1.06
IDH3A-204ENST00000558016 CD46P15529 392 aa8.46□□□□□ -1.06
IDH3A-204ENST00000558016 PHKG2P15735 406 aa8.46□□□□□ -1.06
IDH3A-204ENST00000558016 GRIPAP1Q4V328 841 aa8.46□□□□□ -1.06
IDH3A-204ENST00000558016 ZNF697Q5TEC3 545 aa8.46□□□□□ -1.06
IDH3A-204ENST00000558016 SULT6B1Q6IMI4 303 aa8.46□□□□□ -1.06
IDH3A-204ENST00000558016 TRIM67Q6ZTA4 783 aa8.46□□□□□ -1.06
IDH3A-204ENST00000558016 FAM160A2Q8N612 972 aaPredicted RBP8.46□□□□□ -1.06
IDH3A-204ENST00000558016 ARXQ96QS3 562 aa8.46□□□□□ -1.06
IDH3A-204ENST00000558016 C5P01031 1676 aa8.46□□□□□ -1.06
IDH3A-204ENST00000558016 CABP4P57796 275 aa8.45□□□□□ -1.06
IDH3A-204ENST00000558016 AMOTQ4VCS5 1084 aa8.45□□□□□ -1.06
IDH3A-204ENST00000558016 MSL1Q68DK7 614 aa8.45□□□□□ -1.06
IDH3A-204ENST00000558016 RNF19BQ6ZMZ0 732 aa8.45□□□□□ -1.06
IDH3A-204ENST00000558016 AEBP1Q8IUX7 1158 aa8.45□□□□□ -1.06
IDH3A-204ENST00000558016 CFAP53Q96M91 514 aa8.45□□□□□ -1.06
IDH3A-204ENST00000558016 FHDC1Q9C0D6 1143 aaPredicted RBP8.45□□□□□ -1.06
IDH3A-204ENST00000558016 PNPLA7Q6ZV29 1317 aa8.45□□□□□ -1.06
IDH3A-204ENST00000558016 LY75O60449 1722 aa8.44□□□□□ -1.06
IDH3A-204ENST00000558016 DIAPH1O60610 1272 aaKnown RBP8.44□□□□□ -1.06
IDH3A-204ENST00000558016 HMOX1P09601 288 aa8.44□□□□□ -1.06
IDH3A-204ENST00000558016 PIGBQ92521 554 aa8.44□□□□□ -1.06
IDH3A-204ENST00000558016 PRDM9Q9NQV7 894 aa8.44□□□□□ -1.06
IDH3A-204ENST00000558016 FCF1Q9Y324 198 aaKnown RBP8.44□□□□□ -1.06
IDH3A-204ENST00000558016 PLEKHG2Q9H7P9 1386 aa8.44□□□□□ -1.06
IDH3A-204ENST00000558016 LOC102724428A0A0B4J2F2 783 aa8.43□□□□□ -1.06
IDH3A-204ENST00000558016 TNFRSF10AO00220 468 aa8.43□□□□□ -1.06
IDH3A-204ENST00000558016 YY1P25490 414 aa8.43□□□□□ -1.06
IDH3A-204ENST00000558016 MTHFSP49914 203 aa8.43□□□□□ -1.06
IDH3A-204ENST00000558016 SIK1P57059 783 aa8.43□□□□□ -1.06
IDH3A-204ENST00000558016 BRICD5Q6PL45 260 aa8.43□□□□□ -1.06
IDH3A-204ENST00000558016 FLAD1Q8NFF5 587 aa8.43□□□□□ -1.06
IDH3A-204ENST00000558016 SLC16A10Q8TF71 515 aa8.43□□□□□ -1.06
IDH3A-204ENST00000558016 DCAF5Q96JK2 942 aa8.43□□□□□ -1.06
IDH3A-204ENST00000558016 KDM4AO75164 1064 aa8.42□□□□□ -1.06
IDH3A-204ENST00000558016 GPR162Q16538 588 aa8.42□□□□□ -1.06
IDH3A-204ENST00000558016 KRI1Q8N9T8 703 aaKnown RBP8.42□□□□□ -1.06
IDH3A-204ENST00000558016 ASAP1Q9ULH1 1129 aa8.42□□□□□ -1.06
IDH3A-204ENST00000558016 SALL2Q9Y467 1007 aaPredicted RBP8.42□□□□□ -1.06
IDH3A-204ENST00000558016 C4BP0C0L5 1744 aa8.42□□□□□ -1.06
IDH3A-204ENST00000558016 TUBGCP6Q96RT7 1819 aa8.42□□□□□ -1.06
IDH3A-204ENST00000558016 QSER1Q2KHR3 1735 aa8.41□□□□□ -1.06
IDH3A-204ENST00000558016 KDM6AO15550 1401 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms