RNA–Protein interactions for RNA: ENST00000557827.5

ZEB1-210, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 877 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-210ENST00000557827 MARCH6O60337 910 aa9.91□□□□□ -0.82
ZEB1-210ENST00000557827 ST13P50502 369 aaKnown RBP9.91□□□□□ -0.82
ZEB1-210ENST00000557827 PTPROQ16827 1216 aa9.91□□□□□ -0.82
ZEB1-210ENST00000557827 USPL1Q5W0Q7 1092 aa9.91□□□□□ -0.82
ZEB1-210ENST00000557827 KCTD12Q96CX2 325 aaKnown RBP9.91□□□□□ -0.82
ZEB1-210ENST00000557827 NEUROD4Q9HD90 331 aa9.91□□□□□ -0.82
ZEB1-210ENST00000557827 FAM13BQ9NYF5 915 aa9.91□□□□□ -0.82
ZEB1-210ENST00000557827 MRPL42Q9Y6G3 142 aaKnown RBP9.91□□□□□ -0.82
ZEB1-210ENST00000557827 HSD3B2P26439 372 aa9.9□□□□□ -0.82
ZEB1-210ENST00000557827 IRS1P35568 1242 aa9.9□□□□□ -0.82
ZEB1-210ENST00000557827 ERMP1Q7Z2K6 904 aa9.9□□□□□ -0.82
ZEB1-210ENST00000557827 MPNDQ8N594 471 aa9.9□□□□□ -0.82
ZEB1-210ENST00000557827 MRFAP1L1Q96HT8 127 aa9.9□□□□□ -0.82
ZEB1-210ENST00000557827 COPRSQ9NQ92 184 aa9.9□□□□□ -0.82
ZEB1-210ENST00000557827 FAM8A1Q9UBU6 413 aa9.9□□□□□ -0.82
ZEB1-210ENST00000557827 RAB11FIP3O75154 756 aa9.89□□□□□ -0.83
ZEB1-210ENST00000557827 CLSTN1O94985 981 aa9.89□□□□□ -0.83
ZEB1-210ENST00000557827 CENPCQ03188 943 aa9.89□□□□□ -0.83
ZEB1-210ENST00000557827 NR5A1Q13285 461 aa9.89□□□□□ -0.83
ZEB1-210ENST00000557827 C1orf53Q5VUE5 145 aa9.89□□□□□ -0.83
ZEB1-210ENST00000557827 CKAP2LQ8IYA6 745 aa9.89□□□□□ -0.83
ZEB1-210ENST00000557827 FHDC1Q9C0D6 1143 aaPredicted RBP9.89□□□□□ -0.83
ZEB1-210ENST00000557827 BCS1LQ9Y276 419 aa9.89□□□□□ -0.83
ZEB1-210ENST00000557827 TLL2Q9Y6L7 1015 aa9.89□□□□□ -0.83
ZEB1-210ENST00000557827 TNFRSF21O75509 655 aa9.88□□□□□ -0.83
ZEB1-210ENST00000557827 MICAL2O94851 1124 aa9.88□□□□□ -0.83
ZEB1-210ENST00000557827 USP17L7P0C7H9 530 aa9.88□□□□□ -0.83
ZEB1-210ENST00000557827 GGCXP38435 758 aa9.88□□□□□ -0.83
ZEB1-210ENST00000557827 IGBP1P78318 339 aa9.88□□□□□ -0.83
ZEB1-210ENST00000557827 CLN3Q13286 438 aa9.88□□□□□ -0.83
ZEB1-210ENST00000557827 PLA2G2CQ5R387 149 aa9.88□□□□□ -0.83
ZEB1-210ENST00000557827 RC3H1Q5TC82 1133 aaKnown RBP9.88□□□□□ -0.83
ZEB1-210ENST00000557827 RASGRP4Q8TDF6 673 aa9.88□□□□□ -0.83
ZEB1-210ENST00000557827 PGPEP1Q9NXJ5 209 aa9.88□□□□□ -0.83
ZEB1-210ENST00000557827 FOXD3Q9UJU5 478 aaPredicted RBP9.88□□□□□ -0.83
ZEB1-210ENST00000557827 K7ELQ4 463 aaPredicted RBP9.87□□□□□ -0.83
ZEB1-210ENST00000557827 ADH1CP00326 375 aa9.87□□□□□ -0.83
ZEB1-210ENST00000557827 XRCC5P13010 732 aaKnown RBP9.87□□□□□ -0.83
ZEB1-210ENST00000557827 NBPF6Q5VWK0 638 aa9.87□□□□□ -0.83
ZEB1-210ENST00000557827 MICAL1Q8TDZ2 1067 aa9.87□□□□□ -0.83
ZEB1-210ENST00000557827 KCNB2Q92953 911 aa9.87□□□□□ -0.83
ZEB1-210ENST00000557827 NBPF4Q96M43 638 aa9.87□□□□□ -0.83
ZEB1-210ENST00000557827 HCSTQ9UBK5 93 aa9.87□□□□□ -0.83
ZEB1-210ENST00000557827 hCG_2014768A0A024R1R8 64 aa9.86□□□□□ -0.83
ZEB1-210ENST00000557827 SERINC3Q13530 473 aa9.86□□□□□ -0.83
ZEB1-210ENST00000557827 NOL8Q76FK4 1167 aaKnown RBP9.86□□□□□ -0.83
ZEB1-210ENST00000557827 PPARGC1BQ86YN6 1023 aaKnown RBP9.86□□□□□ -0.83
ZEB1-210ENST00000557827 KDF1Q8NAX2 398 aaPredicted RBP9.86□□□□□ -0.83
ZEB1-210ENST00000557827 SEC16BQ96JE7 1060 aa9.86□□□□□ -0.83
ZEB1-210ENST00000557827 SIAH2O43255 324 aa9.85□□□□□ -0.83
ZEB1-210ENST00000557827 ADH1AP07327 375 aa9.85□□□□□ -0.83
ZEB1-210ENST00000557827 NR3C2P08235 984 aa9.85□□□□□ -0.83
ZEB1-210ENST00000557827 NXPE4Q6UWF7 544 aa9.85□□□□□ -0.83
ZEB1-210ENST00000557827 MKL1Q969V6 931 aa9.85□□□□□ -0.83
ZEB1-210ENST00000557827 NIFKQ9BYG3 293 aaKnown RBP9.85□□□□□ -0.83
ZEB1-210ENST00000557827 SRCIN1Q9C0H9 1055 aa9.85□□□□□ -0.83
ZEB1-210ENST00000557827 ZFYVE28Q9HCC9 887 aa9.85□□□□□ -0.83
ZEB1-210ENST00000557827 RNF223E7ERA6 249 aa9.84□□□□□ -0.83
ZEB1-210ENST00000557827 SSBP05455 408 aaKnown RBP eCLIP9.84□□□□□ -0.83
ZEB1-210ENST00000557827 IBSPP21815 317 aaPredicted RBP9.84□□□□□ -0.83
ZEB1-210ENST00000557827 TXLNAP40222 546 aa9.84□□□□□ -0.83
ZEB1-210ENST00000557827 PTPN5P54829 565 aa9.84□□□□□ -0.83
ZEB1-210ENST00000557827 XKR5Q6UX68 686 aa9.84□□□□□ -0.83
ZEB1-210ENST00000557827 KBTBD4Q9NVX7 518 aa9.84□□□□□ -0.83
ZEB1-210ENST00000557827 RPIAP49247 311 aa9.83□□□□□ -0.84
ZEB1-210ENST00000557827 SNX29Q8TEQ0 813 aa9.83□□□□□ -0.84
ZEB1-210ENST00000557827 SPON2Q9BUD6 331 aa9.83□□□□□ -0.84
ZEB1-210ENST00000557827 ZNF408Q9H9D4 720 aa9.83□□□□□ -0.84
ZEB1-210ENST00000557827 RNF187Q5TA31 235 aaPredicted RBP9.82□□□□□ -0.84
ZEB1-210ENST00000557827 ANKLE1Q8NAG6 615 aa9.82□□□□□ -0.84
ZEB1-210ENST00000557827 ZSCAN10Q96SZ4 725 aaPredicted RBP9.82□□□□□ -0.84
ZEB1-210ENST00000557827 BCO2Q9BYV7 579 aa9.82□□□□□ -0.84
ZEB1-210ENST00000557827 BRINP2Q9C0B6 783 aa9.82□□□□□ -0.84
ZEB1-210ENST00000557827 NFX1Q12986 1120 aaKnown RBP9.81□□□□□ -0.84
ZEB1-210ENST00000557827 ZNF438Q7Z4V0 828 aa9.81□□□□□ -0.84
ZEB1-210ENST00000557827 KIAA0825Q8IV33 1275 aa9.81□□□□□ -0.84
ZEB1-210ENST00000557827 C7orf43Q8WVR3 580 aa9.81□□□□□ -0.84
ZEB1-210ENST00000557827 NLRP3Q96P20 1036 aa9.81□□□□□ -0.84
ZEB1-210ENST00000557827 RSRP1Q9BUV0 290 aa9.81□□□□□ -0.84
ZEB1-210ENST00000557827 NPHS2Q9NP85 383 aa9.81□□□□□ -0.84
ZEB1-210ENST00000557827 NOP58Q9Y2X3 529 aaKnown RBP9.81□□□□□ -0.84
ZEB1-210ENST00000557827 ARID4BQ4LE39 1312 aaPredicted RBP9.81□□□□□ -0.84
ZEB1-210ENST00000557827 TGFBR3LH3BV60 316 aa9.8□□□□□ -0.84
ZEB1-210ENST00000557827 MEN1O00255 615 aa9.8□□□□□ -0.84
ZEB1-210ENST00000557827 ENPP3O14638 875 aa9.8□□□□□ -0.84
ZEB1-210ENST00000557827 PHACTR2O75167 634 aa9.8□□□□□ -0.84
ZEB1-210ENST00000557827 CD2BP2O95400 341 aaKnown RBP9.8□□□□□ -0.84
ZEB1-210ENST00000557827 PTGIRP43119 386 aa9.8□□□□□ -0.84
ZEB1-210ENST00000557827 NASPP49321 788 aaPredicted RBP9.8□□□□□ -0.84
ZEB1-210ENST00000557827 ANAPC15P60006 121 aa9.8□□□□□ -0.84
ZEB1-210ENST00000557827 TMEM214Q6NUQ4 689 aaKnown RBP9.8□□□□□ -0.84
ZEB1-210ENST00000557827 ZCRB1Q8TBF4 217 aaKnown RBP9.8□□□□□ -0.84
ZEB1-210ENST00000557827 NOC4LQ9BVI4 516 aaKnown RBP9.8□□□□□ -0.84
ZEB1-210ENST00000557827 METTL14Q9HCE5 456 aaKnown RBP9.8□□□□□ -0.84
ZEB1-210ENST00000557827 SIRPGQ9P1W8 387 aa9.8□□□□□ -0.84
ZEB1-210ENST00000557827 ADAMTS1Q9UHI8 967 aa9.8□□□□□ -0.84
ZEB1-210ENST00000557827 FNDC3AQ9Y2H6 1198 aaKnown RBP9.8□□□□□ -0.84
ZEB1-210ENST00000557827 POTECB2RU33 542 aa9.79□□□□□ -0.84
ZEB1-210ENST00000557827 POLR3DP05423 398 aaPredicted RBP9.79□□□□□ -0.84
ZEB1-210ENST00000557827 ETFBP38117 255 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms