RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	MRC1	P22897	1456 aa		12.87	□□□□□ -0.35
PABPN1-208	ENST00000557702	DLL1	O00548	723 aa		12.87	□□□□□ -0.35
PABPN1-208	ENST00000557702	HDAC9	Q9UKV0	1011 aa		12.87	□□□□□ -0.35
PABPN1-208	ENST00000557702	ZNF652	Q9Y2D9	606 aa		12.87	□□□□□ -0.35
PABPN1-208	ENST00000557702	A1BG	P04217	495 aa		12.86	□□□□□ -0.35
PABPN1-208	ENST00000557702	ZNF157	P51786	506 aa	Predicted RBP	12.86	□□□□□ -0.35
PABPN1-208	ENST00000557702	ZNF496	Q96IT1	587 aa	Predicted RBP	12.86	□□□□□ -0.35
PABPN1-208	ENST00000557702	BCOR	Q6W2J9	1755 aa		12.86	□□□□□ -0.35
PABPN1-208	ENST00000557702	SNED1	Q8TER0	1413 aa		12.86	□□□□□ -0.35
PABPN1-208	ENST00000557702	COL4A5	P29400	1685 aa		12.86	□□□□□ -0.35
PABPN1-208	ENST00000557702	HEG1	Q9ULI3	1381 aa		12.85	□□□□□ -0.35
PABPN1-208	ENST00000557702	GTF2E1	P29083	439 aa	Predicted RBP	12.85	□□□□□ -0.35
PABPN1-208	ENST00000557702	HIRA	P54198	1017 aa	Predicted RBP	12.85	□□□□□ -0.35
PABPN1-208	ENST00000557702	USP48	Q86UV5	1035 aa		12.85	□□□□□ -0.35
PABPN1-208	ENST00000557702	C2orf69	Q8N8R5	385 aa		12.85	□□□□□ -0.35
PABPN1-208	ENST00000557702	CSRNP1	Q96S65	589 aa		12.85	□□□□□ -0.35
PABPN1-208	ENST00000557702	GBA2	Q9HCG7	927 aa	Predicted RBP	12.85	□□□□□ -0.35
PABPN1-208	ENST00000557702	FAM177B	A6PVY3	158 aa		12.84	□□□□□ -0.35
PABPN1-208	ENST00000557702	PPIP5K2	O43314	1243 aa		12.84	□□□□□ -0.35
PABPN1-208	ENST00000557702	GMPS	P49915	693 aa	Predicted RBP	12.84	□□□□□ -0.35
PABPN1-208	ENST00000557702	ZNF790	Q6PG37	636 aa		12.84	□□□□□ -0.35
PABPN1-208	ENST00000557702	REM2	Q8IYK8	340 aa	Predicted RBP	12.84	□□□□□ -0.35
PABPN1-208	ENST00000557702	NIP7	Q9Y221	180 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
PABPN1-208	ENST00000557702	AKAP11	Q9UKA4	1901 aa		12.84	□□□□□ -0.35
PABPN1-208	ENST00000557702	NPC1L1	Q9UHC9	1359 aa		12.83	□□□□□ -0.36
PABPN1-208	ENST00000557702	MKI67	P46013	3256 aa	Known RBP	12.83	□□□□□ -0.36
PABPN1-208	ENST00000557702	IL13	P35225	146 aa		12.83	□□□□□ -0.36
PABPN1-208	ENST00000557702	CXCL9	Q07325	125 aa		12.83	□□□□□ -0.36
PABPN1-208	ENST00000557702	CRY2	Q49AN0	593 aa		12.83	□□□□□ -0.36
PABPN1-208	ENST00000557702	BCL2L13	Q9BXK5	485 aa		12.83	□□□□□ -0.36
PABPN1-208	ENST00000557702	VPS33B	Q9H267	617 aa		12.83	□□□□□ -0.36
PABPN1-208	ENST00000557702	ZNRF3	Q9ULT6	936 aa		12.83	□□□□□ -0.36
PABPN1-208	ENST00000557702	AOC3	Q16853	763 aa		12.82	□□□□□ -0.36
PABPN1-208	ENST00000557702	TRPM4	Q8TD43	1214 aa		12.82	□□□□□ -0.36
PABPN1-208	ENST00000557702	FMNL2	Q96PY5	1086 aa		12.82	□□□□□ -0.36
PABPN1-208	ENST00000557702	CDHR2	Q9BYE9	1310 aa		12.82	□□□□□ -0.36
PABPN1-208	ENST00000557702		H7C1D1	291 aa		12.81	□□□□□ -0.36
PABPN1-208	ENST00000557702	SLC10A3	P09131	477 aa		12.81	□□□□□ -0.36
PABPN1-208	ENST00000557702	TNIP1	Q15025	636 aa		12.81	□□□□□ -0.36
PABPN1-208	ENST00000557702	MTHFSD	Q2M296	383 aa	Known RBP	12.81	□□□□□ -0.36
PABPN1-208	ENST00000557702	FBXO46	Q6PJ61	603 aa	Predicted RBP	12.81	□□□□□ -0.36
PABPN1-208	ENST00000557702	DLK2	Q6UY11	383 aa		12.81	□□□□□ -0.36
PABPN1-208	ENST00000557702	RPGR	Q92834	1020 aa	Known RBP	12.81	□□□□□ -0.36
PABPN1-208	ENST00000557702	TMX4	Q9H1E5	349 aa	Predicted RBP	12.81	□□□□□ -0.36
PABPN1-208	ENST00000557702	UBR2	Q8IWV8	1755 aa		12.81	□□□□□ -0.36
PABPN1-208	ENST00000557702	RGL2	O15211	777 aa		12.8	□□□□□ -0.36
PABPN1-208	ENST00000557702	TEF	Q10587	303 aa		12.8	□□□□□ -0.36
PABPN1-208	ENST00000557702	KRT26	Q7Z3Y9	468 aa		12.8	□□□□□ -0.36
PABPN1-208	ENST00000557702	SLC17A8	Q8NDX2	589 aa		12.8	□□□□□ -0.36
PABPN1-208	ENST00000557702	ZNF296	Q8WUU4	475 aa	Predicted RBP	12.8	□□□□□ -0.36
PABPN1-208	ENST00000557702	CNOT7	Q9UIV1	285 aa	Known RBP	12.8	□□□□□ -0.36
PABPN1-208	ENST00000557702	TCERG1	O14776	1098 aa	Known RBP	12.79	□□□□□ -0.36
PABPN1-208	ENST00000557702	PPEF1	O14829	653 aa	Predicted RBP	12.79	□□□□□ -0.36
PABPN1-208	ENST00000557702	HOXA10	P31260	410 aa	Predicted RBP	12.79	□□□□□ -0.36
PABPN1-208	ENST00000557702	PIP4K2A	P48426	406 aa	Predicted RBP	12.79	□□□□□ -0.36
PABPN1-208	ENST00000557702	RAD17	O75943	681 aa		12.78	□□□□□ -0.36
PABPN1-208	ENST00000557702	HMOX1	P09601	288 aa		12.78	□□□□□ -0.36
PABPN1-208	ENST00000557702	SUPT20H	Q8NEM7	779 aa		12.78	□□□□□ -0.36
PABPN1-208	ENST00000557702	RBM17	Q96I25	401 aa	Known RBP	12.78	□□□□□ -0.36
PABPN1-208	ENST00000557702	NYX	Q9GZU5	481 aa		12.78	□□□□□ -0.36
PABPN1-208	ENST00000557702	USP16	Q9Y5T5	823 aa		12.78	□□□□□ -0.36
PABPN1-208	ENST00000557702	KIF7	Q2M1P5	1343 aa		12.78	□□□□□ -0.36
PABPN1-208	ENST00000557702	TBC1D8	O95759	1140 aa		12.77	□□□□□ -0.37
PABPN1-208	ENST00000557702	MORC1	Q86VD1	984 aa		12.77	□□□□□ -0.37
PABPN1-208	ENST00000557702	DCPS	Q96C86	337 aa	Known RBP	12.77	□□□□□ -0.37
PABPN1-208	ENST00000557702	CRAMP1	Q96RY5	1269 aa		12.77	□□□□□ -0.37
PABPN1-208	ENST00000557702	COLQ	Q9Y215	455 aa	Predicted RBP	12.77	□□□□□ -0.37
PABPN1-208	ENST00000557702	SHTN1	A0MZ66	631 aa		12.76	□□□□□ -0.37
PABPN1-208	ENST00000557702	NUTM1	Q86Y26	1132 aa		12.76	□□□□□ -0.37
PABPN1-208	ENST00000557702	MICALL2	Q8IY33	904 aa		12.76	□□□□□ -0.37
PABPN1-208	ENST00000557702	POTEF	A5A3E0	1075 aa		12.75	□□□□□ -0.37
PABPN1-208	ENST00000557702	ADM5	C9JUS6	153 aa		12.75	□□□□□ -0.37
PABPN1-208	ENST00000557702	GPR25	O00155	361 aa		12.75	□□□□□ -0.37
PABPN1-208	ENST00000557702	HLF	Q16534	295 aa		12.75	□□□□□ -0.37
PABPN1-208	ENST00000557702	INTS3	Q68E01	1043 aa	Known RBP	12.75	□□□□□ -0.37
PABPN1-208	ENST00000557702	SLC51A	Q86UW1	340 aa		12.75	□□□□□ -0.37
PABPN1-208	ENST00000557702	RASAL3	Q86YV0	1011 aa		12.75	□□□□□ -0.37
PABPN1-208	ENST00000557702	IL17RE	Q8NFR9	667 aa		12.75	□□□□□ -0.37
PABPN1-208	ENST00000557702	KIAA0100	Q14667	2235 aa	Known RBP	12.74	□□□□□ -0.37
PABPN1-208	ENST00000557702	ABCC12	Q96J65	1359 aa		12.74	□□□□□ -0.37
PABPN1-208	ENST00000557702	NOM1	Q5C9Z4	860 aa	Known RBP	12.74	□□□□□ -0.37
PABPN1-208	ENST00000557702	SAMD7	Q7Z3H4	446 aa		12.74	□□□□□ -0.37
PABPN1-208	ENST00000557702	DPF2	Q92785	391 aa		12.74	□□□□□ -0.37
PABPN1-208	ENST00000557702	POLR3GL	Q9BT43	218 aa		12.74	□□□□□ -0.37
PABPN1-208	ENST00000557702	RTFDC1	Q9BY42	306 aa	Predicted RBP	12.74	□□□□□ -0.37
PABPN1-208	ENST00000557702	ATP6V0A2	Q9Y487	856 aa		12.74	□□□□□ -0.37
PABPN1-208	ENST00000557702	TRIOBP	Q9H2D6	2365 aa		12.74	□□□□□ -0.37
PABPN1-208	ENST00000557702	SZT2	Q5T011	3432 aa		12.74	□□□□□ -0.37
PABPN1-208	ENST00000557702	BTBD11	A6QL63	1104 aa		12.73	□□□□□ -0.37
PABPN1-208	ENST00000557702	GNAT3	A8MTJ3	354 aa		12.73	□□□□□ -0.37
PABPN1-208	ENST00000557702	KIAA2012	Q0VF49	1180 aa		12.73	□□□□□ -0.37
PABPN1-208	ENST00000557702	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.73	□□□□□ -0.37
PABPN1-208	ENST00000557702	SULF1	Q8IWU6	871 aa		12.73	□□□□□ -0.37
PABPN1-208	ENST00000557702		A0A0C4DFX4	3053 aa		12.73	□□□□□ -0.37
PABPN1-208	ENST00000557702	POLR2A	P24928	1970 aa	Known RBP	12.72	□□□□□ -0.37
PABPN1-208	ENST00000557702	PRAMEF22	A3QJZ6	481 aa		12.72	□□□□□ -0.37
PABPN1-208	ENST00000557702	KCNQ3	O43525	872 aa		12.72	□□□□□ -0.37
PABPN1-208	ENST00000557702	FKTN	O75072	461 aa		12.72	□□□□□ -0.37
PABPN1-208	ENST00000557702	DPP8	Q6V1X1	898 aa	Predicted RBP	12.72	□□□□□ -0.37
PABPN1-208	ENST00000557702	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.72	□□□□□ -0.37

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