RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 CATIPQ7Z7H3 387 aa20.34■□□□□ 0.85
PTPN21-208ENST00000556564 PDE4BQ07343 736 aa20.34■□□□□ 0.85
PTPN21-208ENST00000556564 OGFOD1Q8N543 542 aa20.34■□□□□ 0.85
PTPN21-208ENST00000556564 CUL5Q93034 780 aa20.34■□□□□ 0.85
PTPN21-208ENST00000556564 METP08581 1390 aa20.34■□□□□ 0.85
PTPN21-208ENST00000556564 CCT2P78371 535 aaKnown RBP20.33■□□□□ 0.85
PTPN21-208ENST00000556564 PLEKHG1Q9ULL1 1385 aa20.33■□□□□ 0.85
PTPN21-208ENST00000556564 KRI1Q8N9T8 703 aaKnown RBP20.33■□□□□ 0.85
PTPN21-208ENST00000556564 ARHGAP45Q92619 1136 aa20.33■□□□□ 0.85
PTPN21-208ENST00000556564 KDM6BO15054 1643 aa20.33■□□□□ 0.85
PTPN21-208ENST00000556564 RAB11FIP4Q86YS3 637 aa20.33■□□□□ 0.85
PTPN21-208ENST00000556564 CNBD1Q8NA66 436 aa20.33■□□□□ 0.85
PTPN21-208ENST00000556564 TTLL5Q6EMB2 1281 aa20.33■□□□□ 0.84
PTPN21-208ENST00000556564 SLC52A2Q9HAB3 445 aa20.33■□□□□ 0.84
PTPN21-208ENST00000556564 TNIP1Q15025 636 aa20.32■□□□□ 0.84
PTPN21-208ENST00000556564 VEZTQ9HBM0 779 aa20.32■□□□□ 0.84
PTPN21-208ENST00000556564 TRAK2O60296 914 aa20.32■□□□□ 0.84
PTPN21-208ENST00000556564 IGHDP01880 384 aa20.32■□□□□ 0.84
PTPN21-208ENST00000556564 ZC3H12CQ9C0D7 883 aaKnown RBP20.32■□□□□ 0.84
PTPN21-208ENST00000556564 MFSD6Q6ZSS7 791 aa20.32■□□□□ 0.84
PTPN21-208ENST00000556564 TANGO6Q9C0B7 1094 aa20.32■□□□□ 0.84
PTPN21-208ENST00000556564 SSRP1Q08945 709 aaKnown RBP20.32■□□□□ 0.84
PTPN21-208ENST00000556564 FILIP1LQ4L180 1135 aa20.32■□□□□ 0.84
PTPN21-208ENST00000556564 MAGI2Q86UL8 1455 aa20.31■□□□□ 0.84
PTPN21-208ENST00000556564 HMGB1P09429 215 aaKnown RBP20.31■□□□□ 0.84
PTPN21-208ENST00000556564 TMEM67Q5HYA8 995 aa20.31■□□□□ 0.84
PTPN21-208ENST00000556564 TNMDQ9H2S6 317 aa20.31■□□□□ 0.84
PTPN21-208ENST00000556564 SLC4A4Q9Y6R1 1079 aa20.31■□□□□ 0.84
PTPN21-208ENST00000556564 MBD3O95983 291 aa20.31■□□□□ 0.84
PTPN21-208ENST00000556564 IL15P40933 162 aaPredicted RBP20.31■□□□□ 0.84
PTPN21-208ENST00000556564 ZGPATQ8N5A5 531 aaKnown RBP20.31■□□□□ 0.84
PTPN21-208ENST00000556564 KAT14Q9H8E8 782 aa20.31■□□□□ 0.84
PTPN21-208ENST00000556564 CCDC196A0A1B0GTZ2 297 aa20.31■□□□□ 0.84
PTPN21-208ENST00000556564 TSPY26PQ9H489 355 aa20.31■□□□□ 0.84
PTPN21-208ENST00000556564 NLRP1Q9C000 1473 aa20.31■□□□□ 0.84
PTPN21-208ENST00000556564 CCDC24Q8N4L8 307 aa20.31■□□□□ 0.84
PTPN21-208ENST00000556564 LINS1Q8NG48 757 aa20.31■□□□□ 0.84
PTPN21-208ENST00000556564 JDP2Q8WYK2 163 aa20.31■□□□□ 0.84
PTPN21-208ENST00000556564 PLXNC1O60486 1568 aa20.3■□□□□ 0.84
PTPN21-208ENST00000556564 STIM1Q13586 685 aa20.3■□□□□ 0.84
PTPN21-208ENST00000556564 FERMT3Q86UX7 667 aa20.3■□□□□ 0.84
PTPN21-208ENST00000556564 TRIM5Q9C035 493 aa20.3■□□□□ 0.84
PTPN21-208ENST00000556564 BICC1Q9H694 974 aaKnown RBP20.3■□□□□ 0.84
PTPN21-208ENST00000556564 BMP2KQ9NSY1 1161 aaPredicted RBP20.3■□□□□ 0.84
PTPN21-208ENST00000556564 TNNQ9UQP3 1299 aa20.3■□□□□ 0.84
PTPN21-208ENST00000556564 NAA16Q6N069 864 aaPredicted RBP20.3■□□□□ 0.84
PTPN21-208ENST00000556564 VAMP4O75379 141 aa20.3■□□□□ 0.84
PTPN21-208ENST00000556564 C16orf71Q8IYS4 520 aaPredicted RBP20.3■□□□□ 0.84
PTPN21-208ENST00000556564 MLH3Q9UHC1 1453 aa20.3■□□□□ 0.84
PTPN21-208ENST00000556564 FAM89AQ96GI7 184 aa20.29■□□□□ 0.84
PTPN21-208ENST00000556564 KDM5AP29375 1690 aaKnown RBP20.29■□□□□ 0.84
PTPN21-208ENST00000556564 A1BGP04217 495 aa20.29■□□□□ 0.84
PTPN21-208ENST00000556564 ATP8B2P98198 1209 aa20.29■□□□□ 0.84
PTPN21-208ENST00000556564 CEP57L1Q8IYX8 460 aa20.29■□□□□ 0.84
PTPN21-208ENST00000556564 NLRP5P59047 1200 aa20.29■□□□□ 0.84
PTPN21-208ENST00000556564 SYCP1Q15431 976 aa20.29■□□□□ 0.84
PTPN21-208ENST00000556564 SCLT1Q96NL6 688 aa20.29■□□□□ 0.84
PTPN21-208ENST00000556564 CFAP45Q9UL16 551 aa20.29■□□□□ 0.84
PTPN21-208ENST00000556564 TTC22Q5TAA0 569 aa20.29■□□□□ 0.84
PTPN21-208ENST00000556564 CEP131Q9UPN4 1083 aa20.29■□□□□ 0.84
PTPN21-208ENST00000556564 HCLS1P14317 486 aaPredicted RBP20.28■□□□□ 0.84
PTPN21-208ENST00000556564 PLEKHG3A1L390 1219 aa20.28■□□□□ 0.84
PTPN21-208ENST00000556564 TFCP2Q12800 502 aa20.28■□□□□ 0.84
PTPN21-208ENST00000556564 GJA3Q9Y6H8 435 aa20.28■□□□□ 0.84
PTPN21-208ENST00000556564 DHX8Q14562 1220 aaKnown RBP20.28■□□□□ 0.84
PTPN21-208ENST00000556564 CCDC87Q9NVE4 849 aa20.28■□□□□ 0.84
PTPN21-208ENST00000556564 PPFIA3O75145 1194 aa20.27■□□□□ 0.84
PTPN21-208ENST00000556564 ZNF335Q9H4Z2 1342 aaPredicted RBP20.27■□□□□ 0.84
PTPN21-208ENST00000556564 TSPY3P0CV98 308 aa20.27■□□□□ 0.84
PTPN21-208ENST00000556564 TSPY8P0CW00 308 aa20.27■□□□□ 0.84
PTPN21-208ENST00000556564 QTRT2Q9H974 415 aaKnown RBP20.27■□□□□ 0.84
PTPN21-208ENST00000556564 C8orf76Q96K31 380 aa20.27■□□□□ 0.84
PTPN21-208ENST00000556564 TBC1D9Q6ZT07 1266 aa20.27■□□□□ 0.83
PTPN21-208ENST00000556564 KIF1BO60333 1816 aa20.26■□□□□ 0.83
PTPN21-208ENST00000556564 DDX21Q9NR30 783 aaKnown RBP eCLIP20.26■□□□□ 0.83
PTPN21-208ENST00000556564 ERVK-7P63135 1459 aa20.26■□□□□ 0.83
PTPN21-208ENST00000556564 G2E3Q7L622 706 aa20.26■□□□□ 0.83
PTPN21-208ENST00000556564 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.26■□□□□ 0.83
PTPN21-208ENST00000556564 SERPINC1P01008 464 aa20.26■□□□□ 0.83
PTPN21-208ENST00000556564 SLC9C2Q5TAH2 1124 aa20.26■□□□□ 0.83
PTPN21-208ENST00000556564 ANKRD2Q9GZV1 360 aa20.25■□□□□ 0.83
PTPN21-208ENST00000556564 PLBD2Q8NHP8 589 aa20.25■□□□□ 0.83
PTPN21-208ENST00000556564 DACH1Q9UI36 760 aa20.25■□□□□ 0.83
PTPN21-208ENST00000556564 MAGEB6P1A0A0J9YX57 407 aa20.25■□□□□ 0.83
PTPN21-208ENST00000556564 MSL1Q68DK7 614 aa20.25■□□□□ 0.83
PTPN21-208ENST00000556564 MICU3Q86XE3 530 aa20.25■□□□□ 0.83
PTPN21-208ENST00000556564 NCOA7Q8NI08 942 aa20.25■□□□□ 0.83
PTPN21-208ENST00000556564 EYA3Q99504 573 aa20.25■□□□□ 0.83
PTPN21-208ENST00000556564 DNAJC10Q8IXB1 793 aa20.25■□□□□ 0.83
PTPN21-208ENST00000556564 PDCL3Q9H2J4 239 aa20.25■□□□□ 0.83
PTPN21-208ENST00000556564 STX8Q9UNK0 236 aa20.25■□□□□ 0.83
PTPN21-208ENST00000556564 BAG6P46379 1132 aa20.24■□□□□ 0.83
PTPN21-208ENST00000556564 ECM2O94769 699 aaPredicted RBP20.24■□□□□ 0.83
PTPN21-208ENST00000556564 NASPP49321 788 aaPredicted RBP20.24■□□□□ 0.83
PTPN21-208ENST00000556564 TRMT1LQ7Z2T5 733 aaKnown RBP20.24■□□□□ 0.83
PTPN21-208ENST00000556564 ANKRD44Q8N8A2 993 aa20.24■□□□□ 0.83
PTPN21-208ENST00000556564 MIGA1Q8NAN2 632 aa20.24■□□□□ 0.83
PTPN21-208ENST00000556564 NUCB1Q02818 461 aa20.24■□□□□ 0.83
PTPN21-208ENST00000556564 KDM5CP41229 1560 aa20.24■□□□□ 0.83
PTPN21-208ENST00000556564 EHMT1Q9H9B1 1298 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms