RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 CRY2Q49AN0 593 aa22.36■■□□□ 1.17
GPHN-211ENST00000556020 ZNF428Q96B54 188 aa22.36■■□□□ 1.17
GPHN-211ENST00000556020 UTP14AQ9BVJ6 771 aaKnown RBP22.36■■□□□ 1.17
GPHN-211ENST00000556020 DUSP27Q5VZP5 1158 aa22.35■■□□□ 1.17
GPHN-211ENST00000556020 C3orf67Q6ZVT6 689 aa22.35■■□□□ 1.17
GPHN-211ENST00000556020 ZNF277Q9NRM2 450 aaPredicted RBP22.35■■□□□ 1.17
GPHN-211ENST00000556020 RIC1Q4ADV7 1423 aa22.34■■□□□ 1.17
GPHN-211ENST00000556020 TCERG1O14776 1098 aaKnown RBP22.34■■□□□ 1.17
GPHN-211ENST00000556020 APLP1P51693 650 aa22.34■■□□□ 1.17
GPHN-211ENST00000556020 FKBP4Q02790 459 aaKnown RBP eCLIP22.34■■□□□ 1.17
GPHN-211ENST00000556020 HSP90AB3PQ58FF7 597 aa22.34■■□□□ 1.17
GPHN-211ENST00000556020 ZNF316A6NFI3 1004 aaPredicted RBP22.33■■□□□ 1.17
GPHN-211ENST00000556020 HOXB7P09629 217 aa22.33■■□□□ 1.17
GPHN-211ENST00000556020 RTKN2Q8IZC4 609 aa22.33■■□□□ 1.17
GPHN-211ENST00000556020 RBM17Q96I25 401 aaKnown RBP22.33■■□□□ 1.17
GPHN-211ENST00000556020 WDR90Q96KV7 1748 aa22.33■■□□□ 1.17
GPHN-211ENST00000556020 ELL2O00472 640 aaPredicted RBP22.32■■□□□ 1.16
GPHN-211ENST00000556020 GNAI1P63096 354 aa22.32■■□□□ 1.16
GPHN-211ENST00000556020 CALD1Q05682 793 aaKnown RBP22.32■■□□□ 1.16
GPHN-211ENST00000556020 FSTL1Q12841 308 aa22.32■■□□□ 1.16
GPHN-211ENST00000556020 NLRP3Q96P20 1036 aa22.32■■□□□ 1.16
GPHN-211ENST00000556020 IFT57Q9NWB7 429 aa22.32■■□□□ 1.16
GPHN-211ENST00000556020 DBF4Q9UBU7 674 aaPredicted RBP22.32■■□□□ 1.16
GPHN-211ENST00000556020 LAMB2P55268 1798 aa22.31■■□□□ 1.16
GPHN-211ENST00000556020 DDNO94850 711 aaPredicted RBP22.31■■□□□ 1.16
GPHN-211ENST00000556020 ZNF853P0CG23 659 aa22.31■■□□□ 1.16
GPHN-211ENST00000556020 HOXA10P31260 410 aaPredicted RBP22.31■■□□□ 1.16
GPHN-211ENST00000556020 TCIRG1Q13488 830 aa22.31■■□□□ 1.16
GPHN-211ENST00000556020 NLRP10Q86W26 655 aa22.31■■□□□ 1.16
GPHN-211ENST00000556020 SMC1BQ8NDV3 1235 aa22.31■■□□□ 1.16
GPHN-211ENST00000556020 POTECB2RU33 542 aa22.3■■□□□ 1.16
GPHN-211ENST00000556020 SLC51AQ86UW1 340 aa22.3■■□□□ 1.16
GPHN-211ENST00000556020 SYNE4Q8N205 404 aa22.3■■□□□ 1.16
GPHN-211ENST00000556020 TRMT112Q9UI30 125 aaKnown RBP22.3■■□□□ 1.16
GPHN-211ENST00000556020 PPEF1O14829 653 aaPredicted RBP22.29■■□□□ 1.16
GPHN-211ENST00000556020 HCLS1P14317 486 aaPredicted RBP22.29■■□□□ 1.16
GPHN-211ENST00000556020 ANP32CO43423 234 aa22.28■■□□□ 1.16
GPHN-211ENST00000556020 IARSP41252 1262 aaKnown RBP22.28■■□□□ 1.16
GPHN-211ENST00000556020 HTRA3P83110 453 aa22.28■■□□□ 1.16
GPHN-211ENST00000556020 ANKRD13DQ6ZTN6 518 aa22.28■■□□□ 1.16
GPHN-211ENST00000556020 PLBD2Q8NHP8 589 aa22.28■■□□□ 1.16
GPHN-211ENST00000556020 CRAMP1Q96RY5 1269 aa22.28■■□□□ 1.16
GPHN-211ENST00000556020 MRS2Q9HD23 443 aa22.28■■□□□ 1.16
GPHN-211ENST00000556020 HYPKQ9NX55 129 aa22.28■■□□□ 1.16
GPHN-211ENST00000556020 SLC10A5Q5PT55 438 aa22.27■■□□□ 1.16
GPHN-211ENST00000556020 ZNF541Q9H0D2 1346 aa22.27■■□□□ 1.16
GPHN-211ENST00000556020 ATP5J2-PTCD1G3V325 749 aa22.26■■□□□ 1.15
GPHN-211ENST00000556020 CC2D2BQ6DHV5 1058 aa22.26■■□□□ 1.15
GPHN-211ENST00000556020 RNF123Q5XPI4 1314 aa22.26■■□□□ 1.15
GPHN-211ENST00000556020 SH3TC1Q8TE82 1336 aa22.26■■□□□ 1.15
GPHN-211ENST00000556020 SNED1Q8TER0 1413 aa22.25■■□□□ 1.15
GPHN-211ENST00000556020 C8orf58Q8NAV2 365 aa22.25■■□□□ 1.15
GPHN-211ENST00000556020 PSMD1Q99460 953 aa22.25■■□□□ 1.15
GPHN-211ENST00000556020 ABCC4O15439 1325 aa22.25■■□□□ 1.15
GPHN-211ENST00000556020 TMX4Q9H1E5 349 aaPredicted RBP22.24■■□□□ 1.15
GPHN-211ENST00000556020 PHAXQ9H814 394 aaKnown RBP22.24■■□□□ 1.15
GPHN-211ENST00000556020 TAF1P21675 1872 aa22.24■■□□□ 1.15
GPHN-211ENST00000556020 DDX60Q8IY21 1712 aaKnown RBP22.23■■□□□ 1.15
GPHN-211ENST00000556020 RTL5Q5HYW3 569 aaPredicted RBP22.23■■□□□ 1.15
GPHN-211ENST00000556020 RIC3Q7Z5B4 369 aa22.23■■□□□ 1.15
GPHN-211ENST00000556020 JDP2Q8WYK2 163 aa22.23■■□□□ 1.15
GPHN-211ENST00000556020 TSR2Q969E8 191 aaKnown RBP22.23■■□□□ 1.15
GPHN-211ENST00000556020 GOLGA2Q08379 1002 aa22.22■■□□□ 1.15
GPHN-211ENST00000556020 ISCA1Q9BUE6 129 aa22.22■■□□□ 1.15
GPHN-211ENST00000556020 SCN4AP35499 1836 aa22.22■■□□□ 1.15
GPHN-211ENST00000556020 COL4A5P29400 1685 aa22.21■■□□□ 1.15
GPHN-211ENST00000556020 POTEIP0CG38 1075 aa22.21■■□□□ 1.15
GPHN-211ENST00000556020 POTEJP0CG39 1038 aa22.21■■□□□ 1.15
GPHN-211ENST00000556020 DDX46Q7L014 1031 aaKnown RBP22.21■■□□□ 1.15
GPHN-211ENST00000556020 LARGE2Q8N3Y3 721 aa22.21■■□□□ 1.15
GPHN-211ENST00000556020 FAM89AQ96GI7 184 aa22.21■■□□□ 1.15
GPHN-211ENST00000556020 IQCA1LA6NCM1 817 aa22.2■■□□□ 1.14
GPHN-211ENST00000556020 DNAJC5GQ8N7S2 189 aa22.2■■□□□ 1.14
GPHN-211ENST00000556020 TSPYL6Q8N831 410 aa22.2■■□□□ 1.14
GPHN-211ENST00000556020 SALL2Q9Y467 1007 aaPredicted RBP22.2■■□□□ 1.14
GPHN-211ENST00000556020 ATP6V0A2Q9Y487 856 aa22.2■■□□□ 1.14
GPHN-211ENST00000556020 FZD9O00144 591 aa22.19■■□□□ 1.14
GPHN-211ENST00000556020 GRIPAP1Q4V328 841 aa22.19■■□□□ 1.14
GPHN-211ENST00000556020 WWC1Q8IX03 1113 aa22.19■■□□□ 1.14
GPHN-211ENST00000556020 L3MBTL3Q96JM7 780 aaPredicted RBP22.19■■□□□ 1.14
GPHN-211ENST00000556020 GJA3Q9Y6H8 435 aa22.19■■□□□ 1.14
GPHN-211ENST00000556020 EIF6P56537 245 aaKnown RBP22.18■■□□□ 1.14
GPHN-211ENST00000556020 EAPPQ56P03 285 aaPredicted RBP22.18■■□□□ 1.14
GPHN-211ENST00000556020 CCDC30Q5VVM6 783 aa22.18■■□□□ 1.14
GPHN-211ENST00000556020 CHADLQ6NUI6 762 aa22.18■■□□□ 1.14
GPHN-211ENST00000556020 MYD88Q99836 296 aa22.18■■□□□ 1.14
GPHN-211ENST00000556020 PPIP5K2O43314 1243 aa22.17■■□□□ 1.14
GPHN-211ENST00000556020 BBOX1O75936 387 aa22.17■■□□□ 1.14
GPHN-211ENST00000556020 GRAPQ13588 217 aa22.17■■□□□ 1.14
GPHN-211ENST00000556020 CCDC27Q2M243 656 aa22.17■■□□□ 1.14
GPHN-211ENST00000556020 GRAPLQ8TC17 118 aaPredicted RBP22.17■■□□□ 1.14
GPHN-211ENST00000556020 TAF1DQ9H5J8 278 aaPredicted RBP22.17■■□□□ 1.14
GPHN-211ENST00000556020 HACL1Q9UJ83 578 aa22.17■■□□□ 1.14
GPHN-211ENST00000556020 AOC3Q16853 763 aa22.16■■□□□ 1.14
GPHN-211ENST00000556020 DPP8Q6V1X1 898 aaPredicted RBP22.16■■□□□ 1.14
GPHN-211ENST00000556020 NIM1KQ8IY84 436 aa22.16■■□□□ 1.14
GPHN-211ENST00000556020 GPC2Q8N158 579 aa22.16■■□□□ 1.14
GPHN-211ENST00000556020 IRS4O14654 1257 aaPredicted RBP22.15■■□□□ 1.14
GPHN-211ENST00000556020 SP8Q8IXZ3 490 aa22.15■■□□□ 1.14
GPHN-211ENST00000556020 CLEC11AQ9Y240 323 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms