RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 DICER1Q9UPY3 1922 aaKnown RBP31.75■■■□□ 2.67
PRKCH-216ENST00000555542 GLTPD2A6NH11 291 aa31.74■■■□□ 2.67
PRKCH-216ENST00000555542 UTP14AQ9BVJ6 771 aaKnown RBP31.74■■■□□ 2.67
PRKCH-216ENST00000555542 MRS2Q9HD23 443 aa31.74■■■□□ 2.67
PRKCH-216ENST00000555542 DBF4Q9UBU7 674 aaPredicted RBP31.74■■■□□ 2.67
PRKCH-216ENST00000555542 CRY2Q49AN0 593 aa31.73■■■□□ 2.67
PRKCH-216ENST00000555542 DPY19L2Q6NUT2 758 aa31.73■■■□□ 2.67
PRKCH-216ENST00000555542 C7orf43Q8WVR3 580 aa31.72■■■□□ 2.67
PRKCH-216ENST00000555542 RIC1Q4ADV7 1423 aa31.72■■■□□ 2.67
PRKCH-216ENST00000555542 ZNF853P0CG23 659 aa31.71■■■□□ 2.67
PRKCH-216ENST00000555542 RTKN2Q8IZC4 609 aa31.7■■■□□ 2.67
PRKCH-216ENST00000555542 OLFM4Q6UX06 510 aa31.69■■■□□ 2.66
PRKCH-216ENST00000555542 RBM46Q8TBY0 533 aaKnown RBP31.69■■■□□ 2.66
PRKCH-216ENST00000555542 RBM17Q96I25 401 aaKnown RBP31.69■■■□□ 2.66
PRKCH-216ENST00000555542 NLRP3Q96P20 1036 aa31.69■■■□□ 2.66
PRKCH-216ENST00000555542 ELL2O00472 640 aaPredicted RBP31.68■■■□□ 2.66
PRKCH-216ENST00000555542 FKBP4Q02790 459 aaKnown RBP eCLIP31.68■■■□□ 2.66
PRKCH-216ENST00000555542 TCIRG1Q13488 830 aa31.68■■■□□ 2.66
PRKCH-216ENST00000555542 HYPKQ9NX55 129 aa31.68■■■□□ 2.66
PRKCH-216ENST00000555542 VEGFAP15692 232 aaPredicted RBP31.67■■■□□ 2.66
PRKCH-216ENST00000555542 NLRP10Q86W26 655 aa31.67■■■□□ 2.66
PRKCH-216ENST00000555542 ANKRD13DQ6ZTN6 518 aa31.66■■■□□ 2.66
PRKCH-216ENST00000555542 PLBD2Q8NHP8 589 aa31.66■■■□□ 2.66
PRKCH-216ENST00000555542 RNF123Q5XPI4 1314 aa31.66■■■□□ 2.66
PRKCH-216ENST00000555542 ZNF277Q9NRM2 450 aaPredicted RBP31.65■■■□□ 2.66
PRKCH-216ENST00000555542 TRMT112Q9UI30 125 aaKnown RBP31.65■■■□□ 2.66
PRKCH-216ENST00000555542 HOXA10P31260 410 aaPredicted RBP31.64■■■□□ 2.66
PRKCH-216ENST00000555542 C3orf67Q6ZVT6 689 aa31.63■■■□□ 2.65
PRKCH-216ENST00000555542 CRAMP1Q96RY5 1269 aa31.63■■■□□ 2.65
PRKCH-216ENST00000555542 TCERG1O14776 1098 aaKnown RBP31.62■■■□□ 2.65
PRKCH-216ENST00000555542 PPEF1O14829 653 aaPredicted RBP31.62■■■□□ 2.65
PRKCH-216ENST00000555542 CC2D2BQ6DHV5 1058 aa31.62■■■□□ 2.65
PRKCH-216ENST00000555542 SH3TC1Q8TE82 1336 aa31.62■■■□□ 2.65
PRKCH-216ENST00000555542 ZNF428Q96B54 188 aa31.62■■■□□ 2.65
PRKCH-216ENST00000555542 TMX4Q9H1E5 349 aaPredicted RBP31.62■■■□□ 2.65
PRKCH-216ENST00000555542 FSTL1Q12841 308 aa31.61■■■□□ 2.65
PRKCH-216ENST00000555542 SLC10A5Q5PT55 438 aa31.61■■■□□ 2.65
PRKCH-216ENST00000555542 WDR90Q96KV7 1748 aa31.61■■■□□ 2.65
PRKCH-216ENST00000555542 APLP1P51693 650 aa31.6■■■□□ 2.65
PRKCH-216ENST00000555542 GOLGA2Q08379 1002 aa31.6■■■□□ 2.65
PRKCH-216ENST00000555542 SYNE4Q8N205 404 aa31.6■■■□□ 2.65
PRKCH-216ENST00000555542 C8orf58Q8NAV2 365 aa31.6■■■□□ 2.65
PRKCH-216ENST00000555542 SMC1BQ8NDV3 1235 aa31.6■■■□□ 2.65
PRKCH-216ENST00000555542 HCLS1P14317 486 aaPredicted RBP31.59■■■□□ 2.65
PRKCH-216ENST00000555542 CCDC27Q2M243 656 aa31.59■■■□□ 2.65
PRKCH-216ENST00000555542 CHMP4AQ9BY43 222 aa31.59■■■□□ 2.65
PRKCH-216ENST00000555542 ATP5J2-PTCD1G3V325 749 aa31.58■■■□□ 2.65
PRKCH-216ENST00000555542 DDNO94850 711 aaPredicted RBP31.58■■■□□ 2.65
PRKCH-216ENST00000555542 IARSP41252 1262 aaKnown RBP31.58■■■□□ 2.65
PRKCH-216ENST00000555542 RIC3Q7Z5B4 369 aa31.58■■■□□ 2.65
PRKCH-216ENST00000555542 WWC1Q8IX03 1113 aa31.58■■■□□ 2.65
PRKCH-216ENST00000555542 LAMB2P55268 1798 aa31.58■■■□□ 2.65
PRKCH-216ENST00000555542 TSR2Q969E8 191 aaKnown RBP31.57■■■□□ 2.64
PRKCH-216ENST00000555542 GRIPAP1Q4V328 841 aa31.56■■■□□ 2.64
PRKCH-216ENST00000555542 CCDC30Q5VVM6 783 aa31.56■■■□□ 2.64
PRKCH-216ENST00000555542 PSMD1Q99460 953 aa31.56■■■□□ 2.64
PRKCH-216ENST00000555542 PHAXQ9H814 394 aaKnown RBP31.56■■■□□ 2.64
PRKCH-216ENST00000555542 ABCC4O15439 1325 aa31.54■■■□□ 2.64
PRKCH-216ENST00000555542 DDX46Q7L014 1031 aaKnown RBP31.54■■■□□ 2.64
PRKCH-216ENST00000555542 JDP2Q8WYK2 163 aa31.54■■■□□ 2.64
PRKCH-216ENST00000555542 ISCA1Q9BUE6 129 aa31.54■■■□□ 2.64
PRKCH-216ENST00000555542 SALL2Q9Y467 1007 aaPredicted RBP31.54■■■□□ 2.64
PRKCH-216ENST00000555542 POTECB2RU33 542 aa31.52■■■□□ 2.64
PRKCH-216ENST00000555542 TSPYL6Q8N831 410 aa31.52■■■□□ 2.64
PRKCH-216ENST00000555542 FAM89AQ96GI7 184 aa31.52■■■□□ 2.64
PRKCH-216ENST00000555542 SNED1Q8TER0 1413 aa31.51■■■□□ 2.64
PRKCH-216ENST00000555542 DDX58O95786 925 aaKnown RBP31.51■■■□□ 2.63
PRKCH-216ENST00000555542 RTL5Q5HYW3 569 aaPredicted RBP31.51■■■□□ 2.63
PRKCH-216ENST00000555542 ZNF541Q9H0D2 1346 aa31.5■■■□□ 2.63
PRKCH-216ENST00000555542 STK31Q9BXU1 1019 aa31.5■■■□□ 2.63
PRKCH-216ENST00000555542 ATP6V0A2Q9Y487 856 aa31.5■■■□□ 2.63
PRKCH-216ENST00000555542 DDX60Q8IY21 1712 aaKnown RBP31.49■■■□□ 2.63
PRKCH-216ENST00000555542 IQCA1LA6NCM1 817 aa31.49■■■□□ 2.63
PRKCH-216ENST00000555542 SLC51AQ86UW1 340 aa31.49■■■□□ 2.63
PRKCH-216ENST00000555542 FAM9BQ8IZU0 186 aa31.49■■■□□ 2.63
PRKCH-216ENST00000555542 MYD88Q99836 296 aa31.49■■■□□ 2.63
PRKCH-216ENST00000555542 IL16Q14005 1332 aa31.49■■■□□ 2.63
PRKCH-216ENST00000555542 BBOX1O75936 387 aa31.48■■■□□ 2.63
PRKCH-216ENST00000555542 LARGE2Q8N3Y3 721 aa31.48■■■□□ 2.63
PRKCH-216ENST00000555542 TWISTNBQ3B726 338 aaPredicted RBP31.47■■■□□ 2.63
PRKCH-216ENST00000555542 NCBP3Q53F19 620 aaKnown RBP31.47■■■□□ 2.63
PRKCH-216ENST00000555542 TRIM28Q13263 835 aaKnown RBP31.46■■■□□ 2.63
PRKCH-216ENST00000555542 GRAPQ13588 217 aa31.46■■■□□ 2.63
PRKCH-216ENST00000555542 GRAPLQ8TC17 118 aaPredicted RBP31.46■■■□□ 2.63
PRKCH-216ENST00000555542 SCN4AP35499 1836 aa31.45■■■□□ 2.63
PRKCH-216ENST00000555542 FZD9O00144 591 aa31.45■■■□□ 2.63
PRKCH-216ENST00000555542 EIF6P56537 245 aaKnown RBP31.45■■■□□ 2.63
PRKCH-216ENST00000555542 CEP350Q5VT06 3117 aa31.45■■■□□ 2.62
PRKCH-216ENST00000555542 IRS4O14654 1257 aaPredicted RBP31.44■■■□□ 2.62
PRKCH-216ENST00000555542 PPIP5K2O43314 1243 aa31.44■■■□□ 2.62
PRKCH-216ENST00000555542 SUPT20HQ8NEM7 779 aa31.44■■■□□ 2.62
PRKCH-216ENST00000555542 L3MBTL3Q96JM7 780 aaPredicted RBP31.44■■■□□ 2.62
PRKCH-216ENST00000555542 TAF1P21675 1872 aa31.44■■■□□ 2.62
PRKCH-216ENST00000555542 DPP8Q6V1X1 898 aaPredicted RBP31.43■■■□□ 2.62
PRKCH-216ENST00000555542 SP8Q8IXZ3 490 aa31.43■■■□□ 2.62
PRKCH-216ENST00000555542 NIM1KQ8IY84 436 aa31.43■■■□□ 2.62
PRKCH-216ENST00000555542 HTRA3P83110 453 aa31.42■■■□□ 2.62
PRKCH-216ENST00000555542 ZBTB38Q8NAP3 1195 aaPredicted RBP31.42■■■□□ 2.62
PRKCH-216ENST00000555542 GJA3Q9Y6H8 435 aa31.42■■■□□ 2.62
PRKCH-216ENST00000555542 HSP90B1P14625 803 aaKnown RBP31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms