RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 TERF1P54274 439 aa20.27■□□□□ 0.84
PPP4R3A-208ENST00000555462 CCT2P78371 535 aaKnown RBP20.27■□□□□ 0.84
PPP4R3A-208ENST00000555462 KRT85P78386 507 aa20.27■□□□□ 0.84
PPP4R3A-208ENST00000555462 KIAA1524Q8TCG1 905 aa20.27■□□□□ 0.84
PPP4R3A-208ENST00000555462 USP6P35125 1406 aa20.27■□□□□ 0.84
PPP4R3A-208ENST00000555462 BICC1Q9H694 974 aaKnown RBP20.27■□□□□ 0.84
PPP4R3A-208ENST00000555462 MRVI1Q9Y6F6 885 aa20.27■□□□□ 0.84
PPP4R3A-208ENST00000555462 IGSF1Q8N6C5 1336 aa20.26■□□□□ 0.83
PPP4R3A-208ENST00000555462 EIF4A1P60842 406 aaKnown RBP20.26■□□□□ 0.83
PPP4R3A-208ENST00000555462 PTPN21Q16825 1174 aa20.26■□□□□ 0.83
PPP4R3A-208ENST00000555462 BLOC1S2Q6QNY1 142 aa20.26■□□□□ 0.83
PPP4R3A-208ENST00000555462 G3BP1Q13283 466 aaKnown RBP eCLIP20.26■□□□□ 0.83
PPP4R3A-208ENST00000555462 SUCLG2Q96I99 432 aa20.26■□□□□ 0.83
PPP4R3A-208ENST00000555462 SLC27A2O14975 620 aa20.25■□□□□ 0.83
PPP4R3A-208ENST00000555462 ISM2Q6H9L7 571 aa20.25■□□□□ 0.83
PPP4R3A-208ENST00000555462 USP16Q9Y5T5 823 aa20.25■□□□□ 0.83
PPP4R3A-208ENST00000555462 CCDC171Q6TFL3 1326 aa20.25■□□□□ 0.83
PPP4R3A-208ENST00000555462 PLEKHG3A1L390 1219 aa20.25■□□□□ 0.83
PPP4R3A-208ENST00000555462 H3BQV1 296 aa20.25■□□□□ 0.83
PPP4R3A-208ENST00000555462 IFFO2Q5TF58 517 aa20.25■□□□□ 0.83
PPP4R3A-208ENST00000555462 RUFY2Q8WXA3 655 aa20.25■□□□□ 0.83
PPP4R3A-208ENST00000555462 A0A0G2JLW4 131 aa20.25■□□□□ 0.83
PPP4R3A-208ENST00000555462 HDGFP51858 240 aaKnown RBP20.25■□□□□ 0.83
PPP4R3A-208ENST00000555462 POLA2Q14181 598 aa20.25■□□□□ 0.83
PPP4R3A-208ENST00000555462 FUCA2Q9BTY2 467 aa20.25■□□□□ 0.83
PPP4R3A-208ENST00000555462 SASH1O94885 1247 aa20.24■□□□□ 0.83
PPP4R3A-208ENST00000555462 TPD52L1Q16890 204 aaPredicted RBP20.24■□□□□ 0.83
PPP4R3A-208ENST00000555462 UVSSAQ2YD98 709 aa20.24■□□□□ 0.83
PPP4R3A-208ENST00000555462 DDX46Q7L014 1031 aaKnown RBP20.24■□□□□ 0.83
PPP4R3A-208ENST00000555462 MAP3K5Q99683 1374 aa20.24■□□□□ 0.83
PPP4R3A-208ENST00000555462 ATP5J2-PTCD1G3V325 749 aa20.23■□□□□ 0.83
PPP4R3A-208ENST00000555462 PTCD1O75127 700 aaKnown RBP20.23■□□□□ 0.83
PPP4R3A-208ENST00000555462 ZNF165P49910 485 aa20.23■□□□□ 0.83
PPP4R3A-208ENST00000555462 CCDC144BQ3MJ40 725 aa20.23■□□□□ 0.83
PPP4R3A-208ENST00000555462 CCDC144CPQ8IYA2 1237 aa20.23■□□□□ 0.83
PPP4R3A-208ENST00000555462 NCOA5Q9HCD5 579 aaKnown RBP20.23■□□□□ 0.83
PPP4R3A-208ENST00000555462 USP27XA6NNY8 438 aa20.23■□□□□ 0.83
PPP4R3A-208ENST00000555462 STK11IPQ8N1F8 1099 aa20.23■□□□□ 0.83
PPP4R3A-208ENST00000555462 TNNT1P13805 278 aa20.22■□□□□ 0.83
PPP4R3A-208ENST00000555462 OTUD7BQ6GQQ9 843 aa20.22■□□□□ 0.83
PPP4R3A-208ENST00000555462 BRF1Q92994 677 aa20.22■□□□□ 0.83
PPP4R3A-208ENST00000555462 ZSWIM6Q9HCJ5 1215 aa20.22■□□□□ 0.83
PPP4R3A-208ENST00000555462 CLTCQ00610 1675 aaKnown RBP20.22■□□□□ 0.83
PPP4R3A-208ENST00000555462 OVOS2A0A0J9YW53 1432 aa20.22■□□□□ 0.83
PPP4R3A-208ENST00000555462 OVOS2Q6IE36 1432 aa20.22■□□□□ 0.83
PPP4R3A-208ENST00000555462 HMGN5P82970 282 aaKnown RBP20.22■□□□□ 0.83
PPP4R3A-208ENST00000555462 VPS53Q5VIR6 699 aa20.22■□□□□ 0.83
PPP4R3A-208ENST00000555462 PEAK1Q9H792 1746 aa20.22■□□□□ 0.83
PPP4R3A-208ENST00000555462 ZSCAN20P17040 1043 aaPredicted RBP20.21■□□□□ 0.83
PPP4R3A-208ENST00000555462 MAPK8IP2Q13387 824 aaPredicted RBP20.21■□□□□ 0.83
PPP4R3A-208ENST00000555462 NECTIN1Q15223 517 aa20.21■□□□□ 0.83
PPP4R3A-208ENST00000555462 RIC3Q7Z5B4 369 aa20.21■□□□□ 0.83
PPP4R3A-208ENST00000555462 FAM200AQ8TCP9 573 aa20.21■□□□□ 0.83
PPP4R3A-208ENST00000555462 PGBD1Q96JS3 809 aa20.21■□□□□ 0.83
PPP4R3A-208ENST00000555462 SBNO1A3KN83 1393 aa20.21■□□□□ 0.83
PPP4R3A-208ENST00000555462 KCNA6P17658 529 aa20.21■□□□□ 0.83
PPP4R3A-208ENST00000555462 CLIP2Q9UDT6 1046 aa20.21■□□□□ 0.83
PPP4R3A-208ENST00000555462 NEO1Q92859 1461 aa20.21■□□□□ 0.83
PPP4R3A-208ENST00000555462 CACTINQ8WUQ7 758 aaKnown RBP20.21■□□□□ 0.83
PPP4R3A-208ENST00000555462 PRIMPOLQ96LW4 560 aa20.21■□□□□ 0.83
PPP4R3A-208ENST00000555462 EPHA10Q5JZY3 1008 aa20.2■□□□□ 0.82
PPP4R3A-208ENST00000555462 LEO1Q8WVC0 666 aaPredicted RBP20.2■□□□□ 0.82
PPP4R3A-208ENST00000555462 GPATCH3Q96I76 525 aa20.2■□□□□ 0.82
PPP4R3A-208ENST00000555462 CCDC85AQ96PX6 553 aaPredicted RBP20.2■□□□□ 0.82
PPP4R3A-208ENST00000555462 BIN1O00499 593 aa20.19■□□□□ 0.82
PPP4R3A-208ENST00000555462 ARHGEF10O15013 1369 aa20.19■□□□□ 0.82
PPP4R3A-208ENST00000555462 LETM1O95202 739 aaPredicted RBP20.19■□□□□ 0.82
PPP4R3A-208ENST00000555462 HSP90AB3PQ58FF7 597 aa20.19■□□□□ 0.82
PPP4R3A-208ENST00000555462 TMEM87AQ8NBN3 555 aa20.19■□□□□ 0.82
PPP4R3A-208ENST00000555462 NEUROD6Q96NK8 337 aa20.19■□□□□ 0.82
PPP4R3A-208ENST00000555462 ESCO1Q5FWF5 840 aa20.19■□□□□ 0.82
PPP4R3A-208ENST00000555462 EID1Q9Y6B2 187 aa20.19■□□□□ 0.82
PPP4R3A-208ENST00000555462 GOLGA6L6A8MZA4 724 aa20.18■□□□□ 0.82
PPP4R3A-208ENST00000555462 Q6ZUG5 572 aa20.18■□□□□ 0.82
PPP4R3A-208ENST00000555462 C11orf57Q6ZUT1 292 aaPredicted RBP20.18■□□□□ 0.82
PPP4R3A-208ENST00000555462 GJB4Q9NTQ9 266 aa20.18■□□□□ 0.82
PPP4R3A-208ENST00000555462 TOB2Q14106 344 aaPredicted RBP20.18■□□□□ 0.82
PPP4R3A-208ENST00000555462 ADCY9O60503 1353 aa20.18■□□□□ 0.82
PPP4R3A-208ENST00000555462 EVI5LQ96CN4 794 aa20.17■□□□□ 0.82
PPP4R3A-208ENST00000555462 ZNF330Q9Y3S2 320 aaPredicted RBP20.17■□□□□ 0.82
PPP4R3A-208ENST00000555462 KAZALD1Q96I82 304 aa20.17■□□□□ 0.82
PPP4R3A-208ENST00000555462 MYD88Q99836 296 aa20.17■□□□□ 0.82
PPP4R3A-208ENST00000555462 GPHNQ9NQX3 736 aaPredicted RBP20.17■□□□□ 0.82
PPP4R3A-208ENST00000555462 PSME1Q06323 249 aa20.16■□□□□ 0.82
PPP4R3A-208ENST00000555462 ZC3H6P61129 1189 aaKnown RBP20.16■□□□□ 0.82
PPP4R3A-208ENST00000555462 HSP90AA4PQ58FG1 418 aa20.16■□□□□ 0.82
PPP4R3A-208ENST00000555462 GORABQ5T7V8 394 aa20.16■□□□□ 0.82
PPP4R3A-208ENST00000555462 ZSCAN25Q6NSZ9 544 aa20.16■□□□□ 0.82
PPP4R3A-208ENST00000555462 SSH2Q76I76 1423 aa20.16■□□□□ 0.82
PPP4R3A-208ENST00000555462 APOBRQ0VD83 1088 aa20.15■□□□□ 0.82
PPP4R3A-208ENST00000555462 C1orf141Q5JVX7 400 aa20.15■□□□□ 0.82
PPP4R3A-208ENST00000555462 SPTLC3Q9NUV7 552 aa20.15■□□□□ 0.82
PPP4R3A-208ENST00000555462 GOLGA6L19H0YKK7 550 aa20.15■□□□□ 0.82
PPP4R3A-208ENST00000555462 TMX1Q9H3N1 280 aa20.15■□□□□ 0.82
PPP4R3A-208ENST00000555462 SH2B1Q9NRF2 756 aaPredicted RBP20.15■□□□□ 0.82
PPP4R3A-208ENST00000555462 REREQ9P2R6 1566 aa20.15■□□□□ 0.82
PPP4R3A-208ENST00000555462 BECN2A8MW95 431 aa20.15■□□□□ 0.82
PPP4R3A-208ENST00000555462 HSP90AB4PQ58FF6 505 aa20.15■□□□□ 0.82
PPP4R3A-208ENST00000555462 ZNF771Q7L3S4 317 aaPredicted RBP20.15■□□□□ 0.82
PPP4R3A-208ENST00000555462 SMAP1Q8IYB5 467 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms