RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 KAT14Q9H8E8 782 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 TCP11L1Q9NUJ3 509 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 NCBP1Q09161 790 aaKnown RBP7.87□□□□□ -1.15
SYNE2-216ENST00000555002 AAMPQ13685 434 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 KIF2AO00139 706 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-216ENST00000555002 SP4Q02446 784 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 NAA25Q14CX7 972 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 SMC6Q96SB8 1091 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 VEZTQ9HBM0 779 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 GEN1Q17RS7 908 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 CCDC12Q8WUD4 166 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-216ENST00000555002 PPP1R9BQ96SB3 815 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 TTC12Q9H892 705 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-216ENST00000555002 PPP2R5CQ13362 524 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 ANO10Q9NW15 660 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 RAPGEF2Q9Y4G8 1499 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 HAND2P61296 217 aa7.87□□□□□ -1.15
SYNE2-216ENST00000555002 C16orf45Q96MC5 204 aaPredicted RBP7.87□□□□□ -1.15
SYNE2-216ENST00000555002 ST5P78524 1137 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 TMEM67Q5HYA8 995 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 LARP6Q9BRS8 491 aaKnown RBP7.86□□□□□ -1.15
SYNE2-216ENST00000555002 MAK16Q9BXY0 300 aaKnown RBP7.86□□□□□ -1.15
SYNE2-216ENST00000555002 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.86□□□□□ -1.15
SYNE2-216ENST00000555002 V9GYY5 206 aaPredicted RBP7.86□□□□□ -1.15
SYNE2-216ENST00000555002 RSPH3Q86UC2 560 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 CHD1LQ86WJ1 897 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 CACYBPQ9HB71 228 aaKnown RBP7.86□□□□□ -1.15
SYNE2-216ENST00000555002 CABP1Q9NZU7 370 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 ZBTB21Q9ULJ3 1066 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 MICU3Q86XE3 530 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 TRIM47Q96LD4 638 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 CLSTN2Q9H4D0 955 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 STX6O43752 255 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 STX1AQ16623 288 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 CCDC25Q86WR0 208 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 RPGRIP1LQ68CZ1 1315 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 CCDC183Q5T5S1 534 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 HEATR3Q7Z4Q2 680 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 EXOC6BQ9Y2D4 811 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 PLCB3Q01970 1234 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 GAS8O95995 478 aa7.86□□□□□ -1.15
SYNE2-216ENST00000555002 UAP1Q16222 522 aaPredicted RBP7.86□□□□□ -1.15
SYNE2-216ENST00000555002 HARSP12081 509 aaKnown RBP7.85□□□□□ -1.15
SYNE2-216ENST00000555002 HSPA4P34932 840 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 CKAP4Q07065 602 aaKnown RBP7.85□□□□□ -1.15
SYNE2-216ENST00000555002 RBM26Q5T8P6 1007 aaKnown RBP7.85□□□□□ -1.15
SYNE2-216ENST00000555002 CCDC65Q8IXS2 484 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 CDCA7LQ96GN5 454 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 TCHPQ9BT92 498 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 DYNC1I1O14576 645 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 ERCC5P28715 1186 aaPredicted RBP7.85□□□□□ -1.15
SYNE2-216ENST00000555002 SLC26A6Q9BXS9 759 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 NBPF6Q5VWK0 638 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 NBPF5PQ86XG9 351 aaPredicted RBP7.85□□□□□ -1.15
SYNE2-216ENST00000555002 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.85□□□□□ -1.15
SYNE2-216ENST00000555002 NBPF4Q96M43 638 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 ERCC3P19447 782 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 ZNF710Q8N1W2 664 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 PKD2L1Q9P0L9 805 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 TSPY2A6NKD2 308 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 AMPD3Q01432 767 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 RNF41Q9H4P4 317 aaPredicted RBP7.85□□□□□ -1.15
SYNE2-216ENST00000555002 POTEB2H3BUK9 544 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 CCDC14Q49A88 953 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 IMPG2Q9BZV3 1241 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 CWC25Q9NXE8 425 aaPredicted RBP7.85□□□□□ -1.15
SYNE2-216ENST00000555002 DDX12PQ92771 950 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 RTEL1-TNFRSF6BF6WH68 1400 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 RNF34Q969K3 372 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 CCDC114Q96M63 670 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 TXNDC16Q9P2K2 825 aa7.85□□□□□ -1.15
SYNE2-216ENST00000555002 AKR1B10O60218 316 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 BAG3O95817 575 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 KMT5BQ4FZB7 885 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 FEZ2Q9UHY8 353 aaPredicted RBP7.84□□□□□ -1.15
SYNE2-216ENST00000555002 UBA7P41226 1012 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 MNAT1P51948 309 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 IL27Q8NEV9 243 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 CGNQ9P2M7 1197 aaKnown RBP7.84□□□□□ -1.15
SYNE2-216ENST00000555002 PTGS1P23219 599 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 PPP2R5DQ14738 602 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 NOP9Q86U38 636 aaKnown RBP7.84□□□□□ -1.15
SYNE2-216ENST00000555002 CAPZA3Q96KX2 299 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 DDX46Q7L014 1031 aaKnown RBP7.84□□□□□ -1.15
SYNE2-216ENST00000555002 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.84□□□□□ -1.15
SYNE2-216ENST00000555002 SARNPP82979 210 aaKnown RBP7.84□□□□□ -1.15
SYNE2-216ENST00000555002 ANKLE2Q86XL3 938 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 TRIM6Q9C030 488 aaPredicted RBP7.84□□□□□ -1.15
SYNE2-216ENST00000555002 PPANQ9NQ55 473 aaKnown RBP7.84□□□□□ -1.15
SYNE2-216ENST00000555002 KIFC2Q96AC6 838 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 SNRKQ9NRH2 765 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 CCDC172P0C7W6 258 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 PPP2R1AP30153 589 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 HSP90AA4PQ58FG1 418 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 FAM169AQ9Y6X4 670 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 IFI16Q16666 785 aaKnown RBP7.84□□□□□ -1.15
SYNE2-216ENST00000555002 MCM10Q7L590 875 aa7.84□□□□□ -1.15
SYNE2-216ENST00000555002 GNAT3A8MTJ3 354 aa7.84□□□□□ -1.16
SYNE2-216ENST00000555002 HMGB2P26583 209 aaKnown RBP7.84□□□□□ -1.16
SYNE2-216ENST00000555002 AFMP43652 599 aa7.84□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms