RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 RIC1Q4ADV7 1423 aa16.45■□□□□ 0.22
RDH11-207ENST00000554731 HOXA10P31260 410 aaPredicted RBP16.45■□□□□ 0.22
RDH11-207ENST00000554731 PNMA8AQ86V59 439 aaPredicted RBP16.45■□□□□ 0.22
RDH11-207ENST00000554731 GPC2Q8N158 579 aa16.45■□□□□ 0.22
RDH11-207ENST00000554731 CNTNAP1P78357 1384 aa16.45■□□□□ 0.22
RDH11-207ENST00000554731 NUP98P52948 1817 aa16.45■□□□□ 0.22
RDH11-207ENST00000554731 RNF123Q5XPI4 1314 aa16.45■□□□□ 0.22
RDH11-207ENST00000554731 TMEM88BA6NKF7 163 aa16.44■□□□□ 0.22
RDH11-207ENST00000554731 ITGBL1O95965 494 aaPredicted RBP16.44■□□□□ 0.22
RDH11-207ENST00000554731 GRIPAP1Q4V328 841 aa16.44■□□□□ 0.22
RDH11-207ENST00000554731 SUSD4Q5VX71 490 aa16.44■□□□□ 0.22
RDH11-207ENST00000554731 ZNF34Q8IZ26 560 aa16.44■□□□□ 0.22
RDH11-207ENST00000554731 RBM17Q96I25 401 aaKnown RBP16.44■□□□□ 0.22
RDH11-207ENST00000554731 TSPYL4Q9UJ04 414 aa16.44■□□□□ 0.22
RDH11-207ENST00000554731 SNED1Q8TER0 1413 aa16.44■□□□□ 0.22
RDH11-207ENST00000554731 EIF6P56537 245 aaKnown RBP16.43■□□□□ 0.22
RDH11-207ENST00000554731 GIGYF2Q6Y7W6 1299 aaKnown RBP16.43■□□□□ 0.22
RDH11-207ENST00000554731 PPP1R42Q7Z4L9 355 aa16.43■□□□□ 0.22
RDH11-207ENST00000554731 CRAMP1Q96RY5 1269 aa16.43■□□□□ 0.22
RDH11-207ENST00000554731 NTSR2O95665 410 aa16.42■□□□□ 0.22
RDH11-207ENST00000554731 PARP10Q53GL7 1025 aa16.42■□□□□ 0.22
RDH11-207ENST00000554731 PPEF1O14829 653 aaPredicted RBP16.41■□□□□ 0.22
RDH11-207ENST00000554731 EIF2S2P20042 333 aaKnown RBP16.41■□□□□ 0.22
RDH11-207ENST00000554731 MAP1SQ66K74 1059 aaPredicted RBP16.41■□□□□ 0.22
RDH11-207ENST00000554731 CNTROBQ8N137 903 aa16.41■□□□□ 0.22
RDH11-207ENST00000554731 LARGE2Q8N3Y3 721 aa16.41■□□□□ 0.22
RDH11-207ENST00000554731 GJA3Q9Y6H8 435 aa16.41■□□□□ 0.22
RDH11-207ENST00000554731 TCERG1O14776 1098 aaKnown RBP16.4■□□□□ 0.22
RDH11-207ENST00000554731 LMOD1P29536 600 aaPredicted RBP16.4■□□□□ 0.22
RDH11-207ENST00000554731 RIPK4P57078 832 aa16.4■□□□□ 0.22
RDH11-207ENST00000554731 NLRP3Q96P20 1036 aa16.4■□□□□ 0.22
RDH11-207ENST00000554731 TMX4Q9H1E5 349 aaPredicted RBP16.4■□□□□ 0.22
RDH11-207ENST00000554731 ADAMTSL1Q8N6G6 1762 aa16.39■□□□□ 0.21
RDH11-207ENST00000554731 VEGFBP49765 207 aa16.39■□□□□ 0.21
RDH11-207ENST00000554731 C3orf67Q6ZVT6 689 aa16.39■□□□□ 0.21
RDH11-207ENST00000554731 UTP14AQ9BVJ6 771 aaKnown RBP16.39■□□□□ 0.21
RDH11-207ENST00000554731 BABAM1Q9NWV8 329 aa16.39■□□□□ 0.21
RDH11-207ENST00000554731 COL4A5P29400 1685 aa16.38■□□□□ 0.21
RDH11-207ENST00000554731 FOXN1O15353 648 aa16.38■□□□□ 0.21
RDH11-207ENST00000554731 LMOD3Q0VAK6 560 aa16.38■□□□□ 0.21
RDH11-207ENST00000554731 PDIA6Q15084 440 aa16.38■□□□□ 0.21
RDH11-207ENST00000554731 LRP10Q7Z4F1 713 aa16.38■□□□□ 0.21
RDH11-207ENST00000554731 NIM1KQ8IY84 436 aa16.38■□□□□ 0.21
RDH11-207ENST00000554731 AIDAQ96BJ3 306 aa16.38■□□□□ 0.21
RDH11-207ENST00000554731 ANXA1P04083 346 aa16.37■□□□□ 0.21
RDH11-207ENST00000554731 RALBP1Q15311 655 aa16.37■□□□□ 0.21
RDH11-207ENST00000554731 PROSER3Q2NL68 480 aa16.37■□□□□ 0.21
RDH11-207ENST00000554731 SLC10A5Q5PT55 438 aa16.37■□□□□ 0.21
RDH11-207ENST00000554731 RASSF10A6NK89 507 aa16.36■□□□□ 0.21
RDH11-207ENST00000554731 PPIP5K2O43314 1243 aa16.36■□□□□ 0.21
RDH11-207ENST00000554731 TMPOP42166 694 aaKnown RBP16.36■□□□□ 0.21
RDH11-207ENST00000554731 EPS15P42566 896 aa16.36■□□□□ 0.21
RDH11-207ENST00000554731 CTCFP49711 727 aaPredicted RBP16.36■□□□□ 0.21
RDH11-207ENST00000554731 SCNN1DP51172 638 aa16.36■□□□□ 0.21
RDH11-207ENST00000554731 DEFB115Q30KQ5 88 aa16.36■□□□□ 0.21
RDH11-207ENST00000554731 HSP90AB3PQ58FF7 597 aa16.36■□□□□ 0.21
RDH11-207ENST00000554731 SLC51AQ86UW1 340 aa16.36■□□□□ 0.21
RDH11-207ENST00000554731 PRDM10Q9NQV6 1147 aa16.36■□□□□ 0.21
RDH11-207ENST00000554731 ATP6V0A2Q9Y487 856 aa16.36■□□□□ 0.21
RDH11-207ENST00000554731 VPS33BQ9H267 617 aa16.35■□□□□ 0.21
RDH11-207ENST00000554731 DDX21Q9NR30 783 aaKnown RBP eCLIP16.35■□□□□ 0.21
RDH11-207ENST00000554731 ABT1Q9ULW3 272 aaKnown RBP16.35■□□□□ 0.21
RDH11-207ENST00000554731 AIMP1Q12904 312 aaKnown RBP16.34■□□□□ 0.21
RDH11-207ENST00000554731 AOC3Q16853 763 aa16.34■□□□□ 0.21
RDH11-207ENST00000554731 USP50Q70EL3 339 aaPredicted RBP16.34■□□□□ 0.21
RDH11-207ENST00000554731 COPS6Q7L5N1 327 aa16.34■□□□□ 0.21
RDH11-207ENST00000554731 SUPT20HQ8NEM7 779 aa16.34■□□□□ 0.21
RDH11-207ENST00000554731 XAGE3Q8WTP9 111 aa16.34■□□□□ 0.21
RDH11-207ENST00000554731 NECTIN2Q92692 538 aa16.34■□□□□ 0.21
RDH11-207ENST00000554731 WBP1LQ9NX94 342 aa16.34■□□□□ 0.21
RDH11-207ENST00000554731 ABCC4O15439 1325 aa16.34■□□□□ 0.21
RDH11-207ENST00000554731 BBOX1O75936 387 aa16.33■□□□□ 0.2
RDH11-207ENST00000554731 NLRP10Q86W26 655 aa16.33■□□□□ 0.2
RDH11-207ENST00000554731 LTBP1Q14766 1721 aa16.33■□□□□ 0.2
RDH11-207ENST00000554731 HCLS1P14317 486 aaPredicted RBP16.32■□□□□ 0.2
RDH11-207ENST00000554731 TCIRG1Q13488 830 aa16.32■□□□□ 0.2
RDH11-207ENST00000554731 DPP8Q6V1X1 898 aaPredicted RBP16.32■□□□□ 0.2
RDH11-207ENST00000554731 SP8Q8IXZ3 490 aa16.32■□□□□ 0.2
RDH11-207ENST00000554731 RTFDC1Q9BY42 306 aaPredicted RBP16.32■□□□□ 0.2
RDH11-207ENST00000554731 WDR33Q9C0J8 1336 aaKnown RBP16.32■□□□□ 0.2
RDH11-207ENST00000554731 TRMT112Q9UI30 125 aaKnown RBP16.32■□□□□ 0.2
RDH11-207ENST00000554731 ZNRF3Q9ULT6 936 aa16.32■□□□□ 0.2
RDH11-207ENST00000554731 SH3TC1Q8TE82 1336 aa16.31■□□□□ 0.2
RDH11-207ENST00000554731 NEUROD2Q15784 382 aa16.31■□□□□ 0.2
RDH11-207ENST00000554731 DDX46Q7L014 1031 aaKnown RBP16.31■□□□□ 0.2
RDH11-207ENST00000554731 MPNDQ8N594 471 aa16.31■□□□□ 0.2
RDH11-207ENST00000554731 GPRC5DQ9NZD1 345 aa16.31■□□□□ 0.2
RDH11-207ENST00000554731 CHL1O00533 1208 aa16.3■□□□□ 0.2
RDH11-207ENST00000554731 LBX1P52954 281 aa16.3■□□□□ 0.2
RDH11-207ENST00000554731 MAP2K1Q02750 393 aaPredicted RBP16.3■□□□□ 0.2
RDH11-207ENST00000554731 CXCL9Q07325 125 aa16.3■□□□□ 0.2
RDH11-207ENST00000554731 CCDC146Q8IYE0 955 aa16.3■□□□□ 0.2
RDH11-207ENST00000554731 ADARB2Q9NS39 739 aaKnown RBP16.3■□□□□ 0.2
RDH11-207ENST00000554731 MYBBP1AQ9BQG0 1328 aaKnown RBP16.29■□□□□ 0.2
RDH11-207ENST00000554731 FMR1Q06787 632 aaKnown RBP eCLIP16.29■□□□□ 0.2
RDH11-207ENST00000554731 KIAA2012Q0VF49 1180 aa16.29■□□□□ 0.2
RDH11-207ENST00000554731 GRAPQ13588 217 aa16.29■□□□□ 0.2
RDH11-207ENST00000554731 KRT24Q2M2I5 525 aa16.29■□□□□ 0.2
RDH11-207ENST00000554731 PAXIP1Q6ZW49 1069 aaPredicted RBP16.29■□□□□ 0.2
RDH11-207ENST00000554731 GRAPLQ8TC17 118 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms