RNA–Protein interactions for RNA: ENST00000553999.5

HIF1A-206, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-206ENST00000553999 PHAXQ9H814 394 aaKnown RBP26.72■■□□□ 1.87
HIF1A-206ENST00000553999 ANKRD36CQ5JPF3 1778 aa26.71■■□□□ 1.87
HIF1A-206ENST00000553999 ARFGEF2Q9Y6D5 1785 aa26.71■■□□□ 1.87
HIF1A-206ENST00000553999 KLRG2A4D1S0 409 aaPredicted RBP26.71■■□□□ 1.87
HIF1A-206ENST00000553999 ATP5J2-PTCD1G3V325 749 aa26.71■■□□□ 1.87
HIF1A-206ENST00000553999 IBTKQ9P2D0 1353 aaPredicted RBP26.71■■□□□ 1.87
HIF1A-206ENST00000553999 CCDC88AQ3V6T2 1871 aa26.7■■□□□ 1.87
HIF1A-206ENST00000553999 HCLS1P14317 486 aaPredicted RBP26.7■■□□□ 1.86
HIF1A-206ENST00000553999 NLRP10Q86W26 655 aa26.7■■□□□ 1.86
HIF1A-206ENST00000553999 TCIRG1Q13488 830 aa26.69■■□□□ 1.86
HIF1A-206ENST00000553999 CCDC93Q567U6 631 aa26.69■■□□□ 1.86
HIF1A-206ENST00000553999 HSP90AB3PQ58FF7 597 aa26.69■■□□□ 1.86
HIF1A-206ENST00000553999 RTL5Q5HYW3 569 aaPredicted RBP26.69■■□□□ 1.86
HIF1A-206ENST00000553999 HYPKQ9NX55 129 aa26.69■■□□□ 1.86
HIF1A-206ENST00000553999 TRMT112Q9UI30 125 aaKnown RBP26.69■■□□□ 1.86
HIF1A-206ENST00000553999 FER1L6Q2WGJ9 1857 aa26.68■■□□□ 1.86
HIF1A-206ENST00000553999 ANKRD13DQ6ZTN6 518 aa26.68■■□□□ 1.86
HIF1A-206ENST00000553999 PLBD2Q8NHP8 589 aa26.68■■□□□ 1.86
HIF1A-206ENST00000553999 RRAGCQ9HB90 399 aa26.68■■□□□ 1.86
HIF1A-206ENST00000553999 CRY2Q49AN0 593 aa26.67■■□□□ 1.86
HIF1A-206ENST00000553999 KDM2BQ8NHM5 1336 aa26.66■■□□□ 1.86
HIF1A-206ENST00000553999 CCDC27Q2M243 656 aa26.66■■□□□ 1.86
HIF1A-206ENST00000553999 RIC3Q7Z5B4 369 aa26.66■■□□□ 1.86
HIF1A-206ENST00000553999 C7orf43Q8WVR3 580 aa26.66■■□□□ 1.86
HIF1A-206ENST00000553999 ZNF277Q9NRM2 450 aaPredicted RBP26.66■■□□□ 1.86
HIF1A-206ENST00000553999 ALDH1B1P30837 517 aa26.65■■□□□ 1.86
HIF1A-206ENST00000553999 GOLGA2Q08379 1002 aa26.65■■□□□ 1.86
HIF1A-206ENST00000553999 SOGA3Q5TF21 947 aa26.65■■□□□ 1.86
HIF1A-206ENST00000553999 RBM17Q96I25 401 aaKnown RBP26.64■■□□□ 1.86
HIF1A-206ENST00000553999 NLRP3Q96P20 1036 aa26.64■■□□□ 1.86
HIF1A-206ENST00000553999 C16orf71Q8IYS4 520 aaPredicted RBP26.63■■□□□ 1.85
HIF1A-206ENST00000553999 RIC1Q4ADV7 1423 aa26.63■■□□□ 1.85
HIF1A-206ENST00000553999 PPEF1O14829 653 aaPredicted RBP26.62■■□□□ 1.85
HIF1A-206ENST00000553999 CCDC30Q5VVM6 783 aa26.62■■□□□ 1.85
HIF1A-206ENST00000553999 FAM89AQ96GI7 184 aa26.62■■□□□ 1.85
HIF1A-206ENST00000553999 MYD88Q99836 296 aa26.62■■□□□ 1.85
HIF1A-206ENST00000553999 SH3TC1Q8TE82 1336 aa26.62■■□□□ 1.85
HIF1A-206ENST00000553999 LTBP3Q9NS15 1303 aa26.62■■□□□ 1.85
HIF1A-206ENST00000553999 FANCIQ9NVI1 1328 aa26.62■■□□□ 1.85
HIF1A-206ENST00000553999 TWISTNBQ3B726 338 aaPredicted RBP26.61■■□□□ 1.85
HIF1A-206ENST00000553999 FKBP4Q02790 459 aaKnown RBP eCLIP26.6■■□□□ 1.85
HIF1A-206ENST00000553999 JARID2Q92833 1246 aaPredicted RBP26.6■■□□□ 1.85
HIF1A-206ENST00000553999 ISCA1Q9BUE6 129 aa26.6■■□□□ 1.85
HIF1A-206ENST00000553999 LAMB2P55268 1798 aa26.59■■□□□ 1.85
HIF1A-206ENST00000553999 GLTPD2A6NH11 291 aa26.59■■□□□ 1.85
HIF1A-206ENST00000553999 HOXA10P31260 410 aaPredicted RBP26.59■■□□□ 1.85
HIF1A-206ENST00000553999 ABCC4O15439 1325 aa26.59■■□□□ 1.85
HIF1A-206ENST00000553999 SLC10A5Q5PT55 438 aa26.58■■□□□ 1.85
HIF1A-206ENST00000553999 STK31Q9BXU1 1019 aa26.58■■□□□ 1.85
HIF1A-206ENST00000553999 SPINK5Q9NQ38 1064 aaPredicted RBP26.58■■□□□ 1.85
HIF1A-206ENST00000553999 ZC3H4Q9UPT8 1303 aaKnown RBP26.58■■□□□ 1.85
HIF1A-206ENST00000553999 TOMM70O94826 608 aa26.57■■□□□ 1.84
HIF1A-206ENST00000553999 RTKN2Q8IZC4 609 aa26.57■■□□□ 1.84
HIF1A-206ENST00000553999 CRAMP1Q96RY5 1269 aa26.57■■□□□ 1.84
HIF1A-206ENST00000553999 IL16Q14005 1332 aa26.57■■□□□ 1.84
HIF1A-206ENST00000553999 DDNO94850 711 aaPredicted RBP26.56■■□□□ 1.84
HIF1A-206ENST00000553999 G2E3Q7L622 706 aa26.56■■□□□ 1.84
HIF1A-206ENST00000553999 EXOSC9Q06265 439 aaKnown RBP26.55■■□□□ 1.84
HIF1A-206ENST00000553999 DPY19L2Q6NUT2 758 aa26.55■■□□□ 1.84
HIF1A-206ENST00000553999 MAP3K2Q9Y2U5 619 aa26.55■■□□□ 1.84
HIF1A-206ENST00000553999 RNF123Q5XPI4 1314 aa26.55■■□□□ 1.84
HIF1A-206ENST00000553999 DICER1Q9UPY3 1922 aaKnown RBP26.55■■□□□ 1.84
HIF1A-206ENST00000553999 DDX60Q8IY21 1712 aaKnown RBP26.54■■□□□ 1.84
HIF1A-206ENST00000553999 IARSP41252 1262 aaKnown RBP26.54■■□□□ 1.84
HIF1A-206ENST00000553999 ZNF541Q9H0D2 1346 aa26.54■■□□□ 1.84
HIF1A-206ENST00000553999 DDX46Q7L014 1031 aaKnown RBP26.53■■□□□ 1.84
HIF1A-206ENST00000553999 WDR63Q8IWG1 891 aa26.53■■□□□ 1.84
HIF1A-206ENST00000553999 IRS4O14654 1257 aaPredicted RBP26.52■■□□□ 1.84
HIF1A-206ENST00000553999 DDX58O95786 925 aaKnown RBP26.52■■□□□ 1.84
HIF1A-206ENST00000553999 SLC4A2P04920 1241 aa26.52■■□□□ 1.84
HIF1A-206ENST00000553999 HSPA6P17066 643 aa26.52■■□□□ 1.84
HIF1A-206ENST00000553999 SNED1Q8TER0 1413 aa26.52■■□□□ 1.84
HIF1A-206ENST00000553999 TAF1P21675 1872 aa26.51■■□□□ 1.83
HIF1A-206ENST00000553999 PI4KAP2A4QPH2 592 aa26.51■■□□□ 1.83
HIF1A-206ENST00000553999 PI4KAP1Q8N8J0 262 aa26.51■■□□□ 1.83
HIF1A-206ENST00000553999 CCDC85AQ96PX6 553 aaPredicted RBP26.51■■□□□ 1.83
HIF1A-206ENST00000553999 VEGFAP15692 232 aaPredicted RBP26.5■■□□□ 1.83
HIF1A-206ENST00000553999 METTL22Q9BUU2 404 aaPredicted RBP26.5■■□□□ 1.83
HIF1A-206ENST00000553999 TMX4Q9H1E5 349 aaPredicted RBP26.5■■□□□ 1.83
HIF1A-206ENST00000553999 COL4A1P02462 1669 aa26.5■■□□□ 1.83
HIF1A-206ENST00000553999 COL4A5P29400 1685 aa26.5■■□□□ 1.83
HIF1A-206ENST00000553999 GRAPQ13588 217 aa26.49■■□□□ 1.83
HIF1A-206ENST00000553999 GRAPLQ8TC17 118 aaPredicted RBP26.49■■□□□ 1.83
HIF1A-206ENST00000553999 ATP6V0A2Q9Y487 856 aa26.49■■□□□ 1.83
HIF1A-206ENST00000553999 POTECB2RU33 542 aa26.48■■□□□ 1.83
HIF1A-206ENST00000553999 LARGE2Q8N3Y3 721 aa26.48■■□□□ 1.83
HIF1A-206ENST00000553999 RBM46Q8TBY0 533 aaKnown RBP26.48■■□□□ 1.83
HIF1A-206ENST00000553999 PSMD1Q99460 953 aa26.48■■□□□ 1.83
HIF1A-206ENST00000553999 CWC25Q9NXE8 425 aaPredicted RBP26.48■■□□□ 1.83
HIF1A-206ENST00000553999 CWF19L2Q2TBE0 894 aaKnown RBP26.47■■□□□ 1.83
HIF1A-206ENST00000553999 NCBP3Q53F19 620 aaKnown RBP26.47■■□□□ 1.83
HIF1A-206ENST00000553999 CC2D2BQ6DHV5 1058 aa26.47■■□□□ 1.83
HIF1A-206ENST00000553999 KSR2Q6VAB6 950 aa26.47■■□□□ 1.83
HIF1A-206ENST00000553999 CELF1Q92879 486 aaKnown RBP26.47■■□□□ 1.83
HIF1A-206ENST00000553999 CHMP4AQ9BY43 222 aa26.47■■□□□ 1.83
HIF1A-206ENST00000553999 WDR90Q96KV7 1748 aa26.46■■□□□ 1.83
HIF1A-206ENST00000553999 PPIP5K2O43314 1243 aa26.46■■□□□ 1.83
HIF1A-206ENST00000553999 VAMP4O75379 141 aa26.46■■□□□ 1.83
HIF1A-206ENST00000553999 HTRA3P83110 453 aa26.46■■□□□ 1.83
HIF1A-206ENST00000553999 AOC3Q16853 763 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms