RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 COL24A1Q17RW2 1714 aa13.53□□□□□ -0.24
PABPN1-203ENST00000553960 LAMB2P55268 1798 aa13.53□□□□□ -0.24
PABPN1-203ENST00000553960 MYH3P11055 1940 aa13.52□□□□□ -0.24
PABPN1-203ENST00000553960 SSFA2P28290 1259 aa13.52□□□□□ -0.25
PABPN1-203ENST00000553960 FOXO4P98177 505 aa13.52□□□□□ -0.25
PABPN1-203ENST00000553960 POTEAQ6S8J7 498 aa13.52□□□□□ -0.25
PABPN1-203ENST00000553960 TICAM2Q86XR7 235 aa13.52□□□□□ -0.25
PABPN1-203ENST00000553960 SUCLG2Q96I99 432 aa13.52□□□□□ -0.25
PABPN1-203ENST00000553960 C1orf115Q9H7X2 142 aa13.52□□□□□ -0.25
PABPN1-203ENST00000553960 STAP2Q9UGK3 403 aa13.52□□□□□ -0.25
PABPN1-203ENST00000553960 SALL3Q9BXA9 1300 aa13.52□□□□□ -0.25
PABPN1-203ENST00000553960 USP42Q9H9J4 1324 aaKnown RBP13.51□□□□□ -0.25
PABPN1-203ENST00000553960 RFX5P48382 616 aaPredicted RBP13.51□□□□□ -0.25
PABPN1-203ENST00000553960 PIP4K2AP48426 406 aaPredicted RBP13.51□□□□□ -0.25
PABPN1-203ENST00000553960 KIF1BPQ96EK5 621 aa13.51□□□□□ -0.25
PABPN1-203ENST00000553960 ZBTB3Q9H5J0 574 aa13.51□□□□□ -0.25
PABPN1-203ENST00000553960 BICC1Q9H694 974 aaKnown RBP13.51□□□□□ -0.25
PABPN1-203ENST00000553960 QSER1Q2KHR3 1735 aa13.5□□□□□ -0.25
PABPN1-203ENST00000553960 SRGAP3O43295 1099 aa13.5□□□□□ -0.25
PABPN1-203ENST00000553960 HLFQ16534 295 aa13.5□□□□□ -0.25
PABPN1-203ENST00000553960 BMP2KLQ5H9B9 411 aa13.5□□□□□ -0.25
PABPN1-203ENST00000553960 SLC10A5Q5PT55 438 aa13.5□□□□□ -0.25
PABPN1-203ENST00000553960 LRRCC1Q9C099 1032 aa13.5□□□□□ -0.25
PABPN1-203ENST00000553960 LRRC4BQ9NT99 713 aa13.5□□□□□ -0.25
PABPN1-203ENST00000553960 RTCBQ9Y3I0 505 aaKnown RBP13.5□□□□□ -0.25
PABPN1-203ENST00000553960 C4AP0C0L4 1744 aa13.5□□□□□ -0.25
PABPN1-203ENST00000553960 EIF5BO60841 1220 aaKnown RBP13.49□□□□□ -0.25
PABPN1-203ENST00000553960 CIAO1O76071 339 aa13.49□□□□□ -0.25
PABPN1-203ENST00000553960 PDE4AP27815 886 aa13.49□□□□□ -0.25
PABPN1-203ENST00000553960 UBE3BQ7Z3V4 1068 aa13.49□□□□□ -0.25
PABPN1-203ENST00000553960 PROM2Q8N271 834 aa13.49□□□□□ -0.25
PABPN1-203ENST00000553960 FLAD1Q8NFF5 587 aa13.49□□□□□ -0.25
PABPN1-203ENST00000553960 GPR108Q9NPR9 543 aa13.49□□□□□ -0.25
PABPN1-203ENST00000553960 EP400Q96L91 3159 aa13.48□□□□□ -0.25
PABPN1-203ENST00000553960 ATP5J2-PTCD1G3V325 749 aa13.48□□□□□ -0.25
PABPN1-203ENST00000553960 ZBTB22O15209 634 aa13.48□□□□□ -0.25
PABPN1-203ENST00000553960 ANKRD45Q5TZF3 282 aa13.48□□□□□ -0.25
PABPN1-203ENST00000553960 UBN2Q6ZU65 1347 aa13.47□□□□□ -0.25
PABPN1-203ENST00000553960 TRIM37O94972 964 aa13.47□□□□□ -0.25
PABPN1-203ENST00000553960 PTPN12Q05209 780 aaKnown RBP13.47□□□□□ -0.25
PABPN1-203ENST00000553960 TXNRD1Q16881 649 aa13.47□□□□□ -0.25
PABPN1-203ENST00000553960 EPHA10Q5JZY3 1008 aa13.47□□□□□ -0.25
PABPN1-203ENST00000553960 CCDC125Q86Z20 511 aa13.47□□□□□ -0.25
PABPN1-203ENST00000553960 PLEKHM2Q8IWE5 1019 aa13.47□□□□□ -0.25
PABPN1-203ENST00000553960 BACH2Q9BYV9 841 aa13.47□□□□□ -0.25
PABPN1-203ENST00000553960 BCL2L12Q9HB09 334 aa13.47□□□□□ -0.25
PABPN1-203ENST00000553960 TBC1D2BQ9UPU7 963 aa13.47□□□□□ -0.25
PABPN1-203ENST00000553960 LRP5O75197 1615 aa13.46□□□□□ -0.25
PABPN1-203ENST00000553960 TUBGCP6Q96RT7 1819 aa13.46□□□□□ -0.25
PABPN1-203ENST00000553960 SH3TC1Q8TE82 1336 aa13.46□□□□□ -0.25
PABPN1-203ENST00000553960 PDE8AO60658 829 aa13.46□□□□□ -0.25
PABPN1-203ENST00000553960 NTSR2O95665 410 aa13.46□□□□□ -0.25
PABPN1-203ENST00000553960 FAM161AQ3B820 660 aa13.46□□□□□ -0.25
PABPN1-203ENST00000553960 FAM182BQ5T319 152 aa13.46□□□□□ -0.25
PABPN1-203ENST00000553960 RHPN1Q8TCX5 695 aa13.46□□□□□ -0.25
PABPN1-203ENST00000553960 AKT1S1Q96B36 256 aa13.46□□□□□ -0.25
PABPN1-203ENST00000553960 SURF6O75683 361 aaKnown RBP13.45□□□□□ -0.26
PABPN1-203ENST00000553960 SF3B3Q15393 1217 aaKnown RBP13.45□□□□□ -0.26
PABPN1-203ENST00000553960 TRAPPC3LQ5T215 181 aa13.45□□□□□ -0.26
PABPN1-203ENST00000553960 ARHGEF1Q92888 912 aaKnown RBP13.45□□□□□ -0.26
PABPN1-203ENST00000553960 UTP14AQ9BVJ6 771 aaKnown RBP13.45□□□□□ -0.26
PABPN1-203ENST00000553960 NYXQ9GZU5 481 aa13.45□□□□□ -0.26
PABPN1-203ENST00000553960 ZBTB47Q9UFB7 747 aaPredicted RBP13.45□□□□□ -0.26
PABPN1-203ENST00000553960 DDX60Q8IY21 1712 aaKnown RBP13.44□□□□□ -0.26
PABPN1-203ENST00000553960 TTC41PQ6P2S7 1318 aa13.44□□□□□ -0.26
PABPN1-203ENST00000553960 GNPATO15228 680 aa13.44□□□□□ -0.26
PABPN1-203ENST00000553960 LMBR1LQ6UX01 489 aa13.44□□□□□ -0.26
PABPN1-203ENST00000553960 TTLL11Q8NHH1 800 aa13.44□□□□□ -0.26
PABPN1-203ENST00000553960 LNPKQ9C0E8 428 aa13.44□□□□□ -0.26
PABPN1-203ENST00000553960 ZPR1O75312 459 aa13.43□□□□□ -0.26
PABPN1-203ENST00000553960 IL15P40933 162 aaPredicted RBP13.43□□□□□ -0.26
PABPN1-203ENST00000553960 PDE1AP54750 535 aa13.43□□□□□ -0.26
PABPN1-203ENST00000553960 CTSWP56202 376 aa13.43□□□□□ -0.26
PABPN1-203ENST00000553960 CAMKK2Q96RR4 588 aa13.43□□□□□ -0.26
PABPN1-203ENST00000553960 TRMT112Q9UI30 125 aaKnown RBP13.43□□□□□ -0.26
PABPN1-203ENST00000553960 NRXN2Q9P2S2 1712 aa13.42□□□□□ -0.26
PABPN1-203ENST00000553960 IRS4O14654 1257 aaPredicted RBP13.42□□□□□ -0.26
PABPN1-203ENST00000553960 SASH1O94885 1247 aa13.42□□□□□ -0.26
PABPN1-203ENST00000553960 G3BP1Q13283 466 aaKnown RBP eCLIP13.42□□□□□ -0.26
PABPN1-203ENST00000553960 C8orf34Q49A92 452 aa13.42□□□□□ -0.26
PABPN1-203ENST00000553960 SUSD4Q5VX71 490 aa13.42□□□□□ -0.26
PABPN1-203ENST00000553960 CLASRPQ8N2M8 674 aaKnown RBP13.42□□□□□ -0.26
PABPN1-203ENST00000553960 NIP7Q9Y221 180 aaKnown RBP eCLIP13.42□□□□□ -0.26
PABPN1-203ENST00000553960 EXOC6BQ9Y2D4 811 aa13.42□□□□□ -0.26
PABPN1-203ENST00000553960 EYA2O00167 538 aa13.41□□□□□ -0.26
PABPN1-203ENST00000553960 EPB41L2O43491 1005 aaKnown RBP13.41□□□□□ -0.26
PABPN1-203ENST00000553960 TM4SF1P30408 202 aa13.41□□□□□ -0.26
PABPN1-203ENST00000553960 TTC22Q5TAA0 569 aa13.41□□□□□ -0.26
PABPN1-203ENST00000553960 ATG9AQ7Z3C6 839 aa13.41□□□□□ -0.26
PABPN1-203ENST00000553960 FAM89AQ96GI7 184 aa13.41□□□□□ -0.26
PABPN1-203ENST00000553960 TSHZ2Q9NRE2 1034 aa13.41□□□□□ -0.26
PABPN1-203ENST00000553960 CARMIL3Q8ND23 1372 aa13.41□□□□□ -0.26
PABPN1-203ENST00000553960 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.4□□□□□ -0.26
PABPN1-203ENST00000553960 KLRG2A4D1S0 409 aaPredicted RBP13.4□□□□□ -0.26
PABPN1-203ENST00000553960 APBA3O96018 575 aa13.4□□□□□ -0.26
PABPN1-203ENST00000553960 MX1P20591 662 aa13.4□□□□□ -0.26
PABPN1-203ENST00000553960 RFC4P35249 363 aa13.4□□□□□ -0.26
PABPN1-203ENST00000553960 RGS3P49796 1198 aa13.4□□□□□ -0.26
PABPN1-203ENST00000553960 CCDC57Q2TAC2 916 aa13.4□□□□□ -0.26
PABPN1-203ENST00000553960 TPTE2Q6XPS3 522 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms