RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 NLRP10Q86W26 655 aa24.12■■□□□ 1.45
RBFOX1-215ENST00000553186 STAP2Q9UGK3 403 aa24.12■■□□□ 1.45
RBFOX1-215ENST00000553186 PCCAP05165 728 aaPredicted RBP24.12■■□□□ 1.45
RBFOX1-215ENST00000553186 LMBR1LQ6UX01 489 aa24.12■■□□□ 1.45
RBFOX1-215ENST00000553186 KLHDC4Q8TBB5 520 aa24.12■■□□□ 1.45
RBFOX1-215ENST00000553186 COPRSQ9NQ92 184 aa24.12■■□□□ 1.45
RBFOX1-215ENST00000553186 ANP32AP39687 249 aaKnown RBP24.11■■□□□ 1.45
RBFOX1-215ENST00000553186 OS9Q13438 667 aaPredicted RBP24.11■■□□□ 1.45
RBFOX1-215ENST00000553186 ERC1Q8IUD2 1116 aa24.11■■□□□ 1.45
RBFOX1-215ENST00000553186 ZBTB38Q8NAP3 1195 aaPredicted RBP24.11■■□□□ 1.45
RBFOX1-215ENST00000553186 GPTP24298 496 aa24.1■■□□□ 1.45
RBFOX1-215ENST00000553186 PTPN12Q05209 780 aaKnown RBP24.1■■□□□ 1.45
RBFOX1-215ENST00000553186 CNTNAP4Q9C0A0 1308 aa24.1■■□□□ 1.45
RBFOX1-215ENST00000553186 SBF2Q86WG5 1849 aa24.1■■□□□ 1.45
RBFOX1-215ENST00000553186 CAMTA2O94983 1202 aa24.1■■□□□ 1.45
RBFOX1-215ENST00000553186 ZNF772Q68DY9 489 aaPredicted RBP24.1■■□□□ 1.45
RBFOX1-215ENST00000553186 ZNF34Q8IZ26 560 aa24.1■■□□□ 1.45
RBFOX1-215ENST00000553186 EP400Q96L91 3159 aa24.09■■□□□ 1.45
RBFOX1-215ENST00000553186 SASH1O94885 1247 aa24.09■■□□□ 1.45
RBFOX1-215ENST00000553186 BCL11BQ9C0K0 894 aaPredicted RBP24.09■■□□□ 1.45
RBFOX1-215ENST00000553186 G3BP1Q13283 466 aaKnown RBP eCLIP24.09■■□□□ 1.45
RBFOX1-215ENST00000553186 TSHZ3Q63HK5 1081 aa24.09■■□□□ 1.45
RBFOX1-215ENST00000553186 FAM89AQ96GI7 184 aa24.09■■□□□ 1.45
RBFOX1-215ENST00000553186 KRT27Q7Z3Y8 459 aa24.08■■□□□ 1.45
RBFOX1-215ENST00000553186 NUTM1Q86Y26 1132 aa24.08■■□□□ 1.45
RBFOX1-215ENST00000553186 SDSP20132 328 aa24.08■■□□□ 1.44
RBFOX1-215ENST00000553186 PLA2G12BQ9BX93 195 aa24.08■■□□□ 1.44
RBFOX1-215ENST00000553186 SIL1Q9H173 461 aa24.08■■□□□ 1.44
RBFOX1-215ENST00000553186 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.08■■□□□ 1.44
RBFOX1-215ENST00000553186 UBN2Q6ZU65 1347 aa24.08■■□□□ 1.44
RBFOX1-215ENST00000553186 RC3H1Q5TC82 1133 aaKnown RBP24.07■■□□□ 1.44
RBFOX1-215ENST00000553186 CCNL1Q9UK58 526 aaPredicted RBP24.07■■□□□ 1.44
RBFOX1-215ENST00000553186 NUP98P52948 1817 aa24.07■■□□□ 1.44
RBFOX1-215ENST00000553186 AOX1Q06278 1338 aa24.06■■□□□ 1.44
RBFOX1-215ENST00000553186 RBM6P78332 1123 aaKnown RBP24.06■■□□□ 1.44
RBFOX1-215ENST00000553186 TBC1D9Q6ZT07 1266 aa24.06■■□□□ 1.44
RBFOX1-215ENST00000553186 CDHR2Q9BYE9 1310 aa24.06■■□□□ 1.44
RBFOX1-215ENST00000553186 FAM196AQ6ZSG2 479 aa24.06■■□□□ 1.44
RBFOX1-215ENST00000553186 CLASRPQ8N2M8 674 aaKnown RBP24.06■■□□□ 1.44
RBFOX1-215ENST00000553186 ANKRD36CQ5JPF3 1778 aa24.06■■□□□ 1.44
RBFOX1-215ENST00000553186 SYNE4Q8N205 404 aa24.05■■□□□ 1.44
RBFOX1-215ENST00000553186 CDC45O75419 566 aa24.05■■□□□ 1.44
RBFOX1-215ENST00000553186 USP42Q9H9J4 1324 aaKnown RBP24.04■■□□□ 1.44
RBFOX1-215ENST00000553186 CHMP3Q9Y3E7 222 aa24.03■■□□□ 1.44
RBFOX1-215ENST00000553186 LY75O60449 1722 aa24.03■■□□□ 1.44
RBFOX1-215ENST00000553186 BRWD3Q6RI45 1802 aa24.03■■□□□ 1.44
RBFOX1-215ENST00000553186 CSF1RP07333 972 aa24.02■■□□□ 1.44
RBFOX1-215ENST00000553186 PI4K2BQ8TCG2 481 aa24.02■■□□□ 1.44
RBFOX1-215ENST00000553186 UPF2Q9HAU5 1272 aaKnown RBP24.02■■□□□ 1.44
RBFOX1-215ENST00000553186 TRMT112Q9UI30 125 aaKnown RBP24.02■■□□□ 1.44
RBFOX1-215ENST00000553186 MFAP1P55081 439 aaKnown RBP24.02■■□□□ 1.44
RBFOX1-215ENST00000553186 EAF2Q96CJ1 260 aaPredicted RBP24.02■■□□□ 1.44
RBFOX1-215ENST00000553186 TBC1D32Q96NH3 1257 aa24.02■■□□□ 1.44
RBFOX1-215ENST00000553186 RPS6KA4O75676 772 aa24.01■■□□□ 1.43
RBFOX1-215ENST00000553186 SUSD4Q5VX71 490 aa24.01■■□□□ 1.43
RBFOX1-215ENST00000553186 IPO9Q96P70 1041 aaKnown RBP24.01■■□□□ 1.43
RBFOX1-215ENST00000553186 CLEC4GQ6UXB4 293 aa24■■□□□ 1.43
RBFOX1-215ENST00000553186 AACSQ86V21 672 aa24■■□□□ 1.43
RBFOX1-215ENST00000553186 IRS4O14654 1257 aaPredicted RBP23.99■■□□□ 1.43
RBFOX1-215ENST00000553186 TTC41PQ6P2S7 1318 aa23.99■■□□□ 1.43
RBFOX1-215ENST00000553186 SMIM5Q71RC9 77 aa23.99■■□□□ 1.43
RBFOX1-215ENST00000553186 ATG9AQ7Z3C6 839 aa23.99■■□□□ 1.43
RBFOX1-215ENST00000553186 IFIT2P09913 472 aaKnown RBP23.98■■□□□ 1.43
RBFOX1-215ENST00000553186 PARP10Q53GL7 1025 aa23.98■■□□□ 1.43
RBFOX1-215ENST00000553186 LRRC4BQ9NT99 713 aa23.98■■□□□ 1.43
RBFOX1-215ENST00000553186 ZNF652Q9Y2D9 606 aa23.98■■□□□ 1.43
RBFOX1-215ENST00000553186 TUBGCP6Q96RT7 1819 aa23.98■■□□□ 1.43
RBFOX1-215ENST00000553186 RGL2O15211 777 aa23.98■■□□□ 1.43
RBFOX1-215ENST00000553186 GNPATO15228 680 aa23.98■■□□□ 1.43
RBFOX1-215ENST00000553186 TRIM37O94972 964 aa23.98■■□□□ 1.43
RBFOX1-215ENST00000553186 AMIGO3Q86WK7 504 aa23.98■■□□□ 1.43
RBFOX1-215ENST00000553186 TTLL11Q8NHH1 800 aa23.98■■□□□ 1.43
RBFOX1-215ENST00000553186 NIP7Q9Y221 180 aaKnown RBP eCLIP23.98■■□□□ 1.43
RBFOX1-215ENST00000553186 TFCP2Q12800 502 aa23.97■■□□□ 1.43
RBFOX1-215ENST00000553186 ZNF594Q96JF6 807 aaPredicted RBP23.97■■□□□ 1.43
RBFOX1-215ENST00000553186 CTSWP56202 376 aa23.96■■□□□ 1.43
RBFOX1-215ENST00000553186 CCDC57Q2TAC2 916 aa23.96■■□□□ 1.43
RBFOX1-215ENST00000553186 ECHDC1Q9NTX5 307 aa23.96■■□□□ 1.43
RBFOX1-215ENST00000553186 BCORQ6W2J9 1755 aa23.96■■□□□ 1.43
RBFOX1-215ENST00000553186 UTP14AQ9BVJ6 771 aaKnown RBP23.96■■□□□ 1.43
RBFOX1-215ENST00000553186 SH3TC1Q8TE82 1336 aa23.96■■□□□ 1.43
RBFOX1-215ENST00000553186 EYA2O00167 538 aa23.95■■□□□ 1.42
RBFOX1-215ENST00000553186 MSH5O43196 834 aa23.95■■□□□ 1.42
RBFOX1-215ENST00000553186 PDE8AO60658 829 aa23.95■■□□□ 1.42
RBFOX1-215ENST00000553186 CCDC8Q9H0W5 538 aaPredicted RBP23.95■■□□□ 1.42
RBFOX1-215ENST00000553186 BCL2L12Q9HB09 334 aa23.95■■□□□ 1.42
RBFOX1-215ENST00000553186 TLR7Q9NYK1 1049 aaKnown RBP23.95■■□□□ 1.42
RBFOX1-215ENST00000553186 NARFQ9UHQ1 456 aa23.95■■□□□ 1.42
RBFOX1-215ENST00000553186 RTCBQ9Y3I0 505 aaKnown RBP23.95■■□□□ 1.42
RBFOX1-215ENST00000553186 TAF1LQ8IZX4 1826 aa23.95■■□□□ 1.42
RBFOX1-215ENST00000553186 GLRX3O76003 335 aaKnown RBP23.95■■□□□ 1.42
RBFOX1-215ENST00000553186 CIAO1O76071 339 aa23.95■■□□□ 1.42
RBFOX1-215ENST00000553186 NTSR2O95665 410 aa23.95■■□□□ 1.42
RBFOX1-215ENST00000553186 CCDC85AQ96PX6 553 aaPredicted RBP23.95■■□□□ 1.42
RBFOX1-215ENST00000553186 C22orf23Q9BZE7 217 aa23.95■■□□□ 1.42
RBFOX1-215ENST00000553186 IL15P40933 162 aaPredicted RBP23.94■■□□□ 1.42
RBFOX1-215ENST00000553186 LRRC24Q50LG9 513 aa23.94■■□□□ 1.42
RBFOX1-215ENST00000553186 TNNI3KQ59H18 835 aa23.94■■□□□ 1.42
RBFOX1-215ENST00000553186 AK7Q96M32 723 aa23.94■■□□□ 1.42
RBFOX1-215ENST00000553186 FPGT-TNNI3KV9GXZ4 949 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms