RNA–Protein interactions for RNA: ENST00000551549.1

GCN1-208, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 2

Gene GCN1, Length 258 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-208ENST00000551549 DPY19L2Q6NUT2 758 aa12.68□□□□□ -0.38
GCN1-208ENST00000551549 PPP1R42Q7Z4L9 355 aa12.68□□□□□ -0.38
GCN1-208ENST00000551549 SLC51AQ86UW1 340 aa12.68□□□□□ -0.38
GCN1-208ENST00000551549 RTKN2Q8IZC4 609 aa12.68□□□□□ -0.38
GCN1-208ENST00000551549 RPGRQ92834 1020 aaKnown RBP12.68□□□□□ -0.38
GCN1-208ENST00000551549 ZNF428Q96B54 188 aa12.68□□□□□ -0.38
GCN1-208ENST00000551549 NUP98P52948 1817 aa12.67□□□□□ -0.38
GCN1-208ENST00000551549 DDNO94850 711 aaPredicted RBP12.67□□□□□ -0.38
GCN1-208ENST00000551549 HOXB7P09629 217 aa12.67□□□□□ -0.38
GCN1-208ENST00000551549 HTRA3P83110 453 aa12.67□□□□□ -0.38
GCN1-208ENST00000551549 TCIRG1Q13488 830 aa12.67□□□□□ -0.38
GCN1-208ENST00000551549 NLRP10Q86W26 655 aa12.67□□□□□ -0.38
GCN1-208ENST00000551549 SYNE4Q8N205 404 aa12.67□□□□□ -0.38
GCN1-208ENST00000551549 RBM17Q96I25 401 aaKnown RBP12.67□□□□□ -0.38
GCN1-208ENST00000551549 FER1L6Q2WGJ9 1857 aa12.67□□□□□ -0.38
GCN1-208ENST00000551549 TNRC6CQ9HCJ0 1690 aaKnown RBP12.67□□□□□ -0.38
GCN1-208ENST00000551549 RIC1Q4ADV7 1423 aa12.66□□□□□ -0.38
GCN1-208ENST00000551549 TCERG1O14776 1098 aaKnown RBP12.66□□□□□ -0.38
GCN1-208ENST00000551549 HCLS1P14317 486 aaPredicted RBP12.66□□□□□ -0.38
GCN1-208ENST00000551549 HSP90AB3PQ58FF7 597 aa12.66□□□□□ -0.38
GCN1-208ENST00000551549 SLC10A5Q5PT55 438 aa12.66□□□□□ -0.38
GCN1-208ENST00000551549 SMC1BQ8NDV3 1235 aa12.66□□□□□ -0.38
GCN1-208ENST00000551549 IFT57Q9NWB7 429 aa12.66□□□□□ -0.38
GCN1-208ENST00000551549 ELL2O00472 640 aaPredicted RBP12.65□□□□□ -0.38
GCN1-208ENST00000551549 DNAJC5GQ8N7S2 189 aa12.65□□□□□ -0.38
GCN1-208ENST00000551549 NLRP3Q96P20 1036 aa12.65□□□□□ -0.38
GCN1-208ENST00000551549 CRAMP1Q96RY5 1269 aa12.65□□□□□ -0.38
GCN1-208ENST00000551549 DBF4Q9UBU7 674 aaPredicted RBP12.65□□□□□ -0.38
GCN1-208ENST00000551549 CCDC88AQ3V6T2 1871 aa12.65□□□□□ -0.38
GCN1-208ENST00000551549 ZNF316A6NFI3 1004 aaPredicted RBP12.64□□□□□ -0.39
GCN1-208ENST00000551549 PPEF1O14829 653 aaPredicted RBP12.64□□□□□ -0.39
GCN1-208ENST00000551549 IARSP41252 1262 aaKnown RBP12.64□□□□□ -0.39
GCN1-208ENST00000551549 GNAI1P63096 354 aa12.64□□□□□ -0.39
GCN1-208ENST00000551549 CALD1Q05682 793 aaKnown RBP12.64□□□□□ -0.39
GCN1-208ENST00000551549 ANKRD13DQ6ZTN6 518 aa12.64□□□□□ -0.39
GCN1-208ENST00000551549 PLBD2Q8NHP8 589 aa12.64□□□□□ -0.39
GCN1-208ENST00000551549 PSMD1Q99460 953 aa12.64□□□□□ -0.39
GCN1-208ENST00000551549 HYPKQ9NX55 129 aa12.64□□□□□ -0.39
GCN1-208ENST00000551549 TRMT112Q9UI30 125 aaKnown RBP12.64□□□□□ -0.39
GCN1-208ENST00000551549 TIAM2Q8IVF5 1701 aa12.64□□□□□ -0.39
GCN1-208ENST00000551549 ARFGEF2Q9Y6D5 1785 aa12.64□□□□□ -0.39
GCN1-208ENST00000551549 ZNF541Q9H0D2 1346 aa12.63□□□□□ -0.39
GCN1-208ENST00000551549 CACNA1SQ13698 1873 aa12.63□□□□□ -0.39
GCN1-208ENST00000551549 SNED1Q8TER0 1413 aa12.63□□□□□ -0.39
GCN1-208ENST00000551549 ATP5J2-PTCD1G3V325 749 aa12.63□□□□□ -0.39
GCN1-208ENST00000551549 CC2D2BQ6DHV5 1058 aa12.63□□□□□ -0.39
GCN1-208ENST00000551549 C8orf58Q8NAV2 365 aa12.63□□□□□ -0.39
GCN1-208ENST00000551549 ABCC4O15439 1325 aa12.62□□□□□ -0.39
GCN1-208ENST00000551549 RNF123Q5XPI4 1314 aa12.62□□□□□ -0.39
GCN1-208ENST00000551549 FZD9O00144 591 aa12.62□□□□□ -0.39
GCN1-208ENST00000551549 POTEIP0CG38 1075 aa12.62□□□□□ -0.39
GCN1-208ENST00000551549 POTEJP0CG39 1038 aa12.62□□□□□ -0.39
GCN1-208ENST00000551549 ISCA1Q9BUE6 129 aa12.62□□□□□ -0.39
GCN1-208ENST00000551549 SH3TC1Q8TE82 1336 aa12.62□□□□□ -0.39
GCN1-208ENST00000551549 TSPYL6Q8N831 410 aa12.61□□□□□ -0.39
GCN1-208ENST00000551549 TSR2Q969E8 191 aaKnown RBP12.61□□□□□ -0.39
GCN1-208ENST00000551549 L3MBTL3Q96JM7 780 aaPredicted RBP12.61□□□□□ -0.39
GCN1-208ENST00000551549 PHAXQ9H814 394 aaKnown RBP12.61□□□□□ -0.39
GCN1-208ENST00000551549 ATP6V0A2Q9Y487 856 aa12.61□□□□□ -0.39
GCN1-208ENST00000551549 WDR90Q96KV7 1748 aa12.61□□□□□ -0.39
GCN1-208ENST00000551549 DICER1Q9UPY3 1922 aaKnown RBP12.6□□□□□ -0.39
GCN1-208ENST00000551549 ANP32CO43423 234 aa12.6□□□□□ -0.39
GCN1-208ENST00000551549 GRIPAP1Q4V328 841 aa12.6□□□□□ -0.39
GCN1-208ENST00000551549 FAM89AQ96GI7 184 aa12.6□□□□□ -0.39
GCN1-208ENST00000551549 TAF1DQ9H5J8 278 aaPredicted RBP12.6□□□□□ -0.39
GCN1-208ENST00000551549 MRS2Q9HD23 443 aa12.6□□□□□ -0.39
GCN1-208ENST00000551549 COL4A5P29400 1685 aa12.59□□□□□ -0.39
GCN1-208ENST00000551549 IQCA1LA6NCM1 817 aa12.59□□□□□ -0.39
GCN1-208ENST00000551549 BBOX1O75936 387 aa12.59□□□□□ -0.39
GCN1-208ENST00000551549 GOLGA2Q08379 1002 aa12.59□□□□□ -0.39
GCN1-208ENST00000551549 TRIM28Q13263 835 aaKnown RBP12.59□□□□□ -0.39
GCN1-208ENST00000551549 RTL5Q5HYW3 569 aaPredicted RBP12.59□□□□□ -0.39
GCN1-208ENST00000551549 CHADLQ6NUI6 762 aa12.59□□□□□ -0.39
GCN1-208ENST00000551549 DDX46Q7L014 1031 aaKnown RBP12.59□□□□□ -0.39
GCN1-208ENST00000551549 RIC3Q7Z5B4 369 aa12.59□□□□□ -0.39
GCN1-208ENST00000551549 WWC1Q8IX03 1113 aa12.59□□□□□ -0.39
GCN1-208ENST00000551549 LARGE2Q8N3Y3 721 aa12.59□□□□□ -0.39
GCN1-208ENST00000551549 JDP2Q8WYK2 163 aa12.59□□□□□ -0.39
GCN1-208ENST00000551549 GRAPQ13588 217 aa12.58□□□□□ -0.4
GCN1-208ENST00000551549 CCDC27Q2M243 656 aa12.58□□□□□ -0.4
GCN1-208ENST00000551549 SP8Q8IXZ3 490 aa12.58□□□□□ -0.4
GCN1-208ENST00000551549 GRAPLQ8TC17 118 aaPredicted RBP12.58□□□□□ -0.4
GCN1-208ENST00000551549 KLRG1Q96E93 195 aa12.58□□□□□ -0.4
GCN1-208ENST00000551549 MYD88Q99836 296 aa12.58□□□□□ -0.4
GCN1-208ENST00000551549 TMX4Q9H1E5 349 aaPredicted RBP12.58□□□□□ -0.4
GCN1-208ENST00000551549 GJA3Q9Y6H8 435 aa12.58□□□□□ -0.4
GCN1-208ENST00000551549 PPIP5K2O43314 1243 aa12.57□□□□□ -0.4
GCN1-208ENST00000551549 EIF6P56537 245 aaKnown RBP12.57□□□□□ -0.4
GCN1-208ENST00000551549 AOC3Q16853 763 aa12.57□□□□□ -0.4
GCN1-208ENST00000551549 EAPPQ56P03 285 aaPredicted RBP12.57□□□□□ -0.4
GCN1-208ENST00000551549 CCDC30Q5VVM6 783 aa12.57□□□□□ -0.4
GCN1-208ENST00000551549 DPP8Q6V1X1 898 aaPredicted RBP12.57□□□□□ -0.4
GCN1-208ENST00000551549 GPC2Q8N158 579 aa12.57□□□□□ -0.4
GCN1-208ENST00000551549 HACL1Q9UJ83 578 aa12.57□□□□□ -0.4
GCN1-208ENST00000551549 SALL2Q9Y467 1007 aaPredicted RBP12.57□□□□□ -0.4
GCN1-208ENST00000551549 IRS4O14654 1257 aaPredicted RBP12.56□□□□□ -0.4
GCN1-208ENST00000551549 EPHX2P34913 555 aa12.56□□□□□ -0.4
GCN1-208ENST00000551549 SF3B3Q15393 1217 aaKnown RBP12.56□□□□□ -0.4
GCN1-208ENST00000551549 LDHDQ86WU2 507 aa12.56□□□□□ -0.4
GCN1-208ENST00000551549 JARID2Q92833 1246 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms