RNA–Protein interactions for RNA: ENST00000550188.1

ARFGAP1-223, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 5

Gene ARFGAP1, Length 572 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-223ENST00000550188 NUP98P52948 1817 aa15.36■□□□□ 0.05
ARFGAP1-223ENST00000550188 CHD4Q14839 1912 aa15.35■□□□□ 0.05
ARFGAP1-223ENST00000550188 EXOSC9Q06265 439 aaKnown RBP15.35■□□□□ 0.05
ARFGAP1-223ENST00000550188 RIC3Q7Z5B4 369 aa15.35■□□□□ 0.05
ARFGAP1-223ENST00000550188 ARFGEF1Q9Y6D6 1849 aa15.35■□□□□ 0.05
ARFGAP1-223ENST00000550188 SOGA3Q5TF21 947 aa15.34■□□□□ 0.05
ARFGAP1-223ENST00000550188 ISCA1Q9BUE6 129 aa15.34■□□□□ 0.05
ARFGAP1-223ENST00000550188 TRMT112Q9UI30 125 aaKnown RBP15.34■□□□□ 0.05
ARFGAP1-223ENST00000550188 TNRC6CQ9HCJ0 1690 aaKnown RBP15.33■□□□□ 0.04
ARFGAP1-223ENST00000550188 TCERG1O14776 1098 aaKnown RBP15.33■□□□□ 0.04
ARFGAP1-223ENST00000550188 C21orf2O43822 256 aa15.33■□□□□ 0.04
ARFGAP1-223ENST00000550188 VAMP4O75379 141 aa15.33■□□□□ 0.04
ARFGAP1-223ENST00000550188 ALDH1B1P30837 517 aa15.33■□□□□ 0.04
ARFGAP1-223ENST00000550188 TRIM28Q13263 835 aaKnown RBP15.33■□□□□ 0.04
ARFGAP1-223ENST00000550188 SLC10A5Q5PT55 438 aa15.33■□□□□ 0.04
ARFGAP1-223ENST00000550188 RPGRQ92834 1020 aaKnown RBP15.33■□□□□ 0.04
ARFGAP1-223ENST00000550188 ZNF219Q9P2Y4 722 aaPredicted RBP15.33■□□□□ 0.04
ARFGAP1-223ENST00000550188 SH3TC1Q8TE82 1336 aa15.33■□□□□ 0.04
ARFGAP1-223ENST00000550188 ATP5J2-PTCD1G3V325 749 aa15.32■□□□□ 0.04
ARFGAP1-223ENST00000550188 SLC4A2P04920 1241 aa15.32■□□□□ 0.04
ARFGAP1-223ENST00000550188 C9orf131Q5VYM1 1079 aa15.32■□□□□ 0.04
ARFGAP1-223ENST00000550188 NLRP3Q96P20 1036 aa15.32■□□□□ 0.04
ARFGAP1-223ENST00000550188 ANKRD36CQ5JPF3 1778 aa15.31■□□□□ 0.04
ARFGAP1-223ENST00000550188 E9PSI1 815 aa15.31■□□□□ 0.04
ARFGAP1-223ENST00000550188 NFKBIEO00221 500 aa15.31■□□□□ 0.04
ARFGAP1-223ENST00000550188 HOXA10P31260 410 aaPredicted RBP15.31■□□□□ 0.04
ARFGAP1-223ENST00000550188 RASSF7Q02833 373 aa15.31■□□□□ 0.04
ARFGAP1-223ENST00000550188 RBM17Q96I25 401 aaKnown RBP15.31■□□□□ 0.04
ARFGAP1-223ENST00000550188 RNF181Q9P0P0 153 aa15.31■□□□□ 0.04
ARFGAP1-223ENST00000550188 LMNB1P20700 586 aa15.3■□□□□ 0.04
ARFGAP1-223ENST00000550188 KSR2Q6VAB6 950 aa15.3■□□□□ 0.04
ARFGAP1-223ENST00000550188 C3orf67Q6ZVT6 689 aa15.3■□□□□ 0.04
ARFGAP1-223ENST00000550188 C7orf43Q8WVR3 580 aa15.3■□□□□ 0.04
ARFGAP1-223ENST00000550188 MYD88Q99836 296 aa15.3■□□□□ 0.04
ARFGAP1-223ENST00000550188 METTL22Q9BUU2 404 aaPredicted RBP15.3■□□□□ 0.04
ARFGAP1-223ENST00000550188 MAP3K2Q9Y2U5 619 aa15.3■□□□□ 0.04
ARFGAP1-223ENST00000550188 LTBP3Q9NS15 1303 aa15.29■□□□□ 0.04
ARFGAP1-223ENST00000550188 PI4KAP2A4QPH2 592 aa15.29■□□□□ 0.04
ARFGAP1-223ENST00000550188 HCLS1P14317 486 aaPredicted RBP15.29■□□□□ 0.04
ARFGAP1-223ENST00000550188 FLIIQ13045 1269 aa15.29■□□□□ 0.04
ARFGAP1-223ENST00000550188 CCDC93Q567U6 631 aa15.29■□□□□ 0.04
ARFGAP1-223ENST00000550188 G2E3Q7L622 706 aa15.29■□□□□ 0.04
ARFGAP1-223ENST00000550188 SYNE4Q8N205 404 aa15.29■□□□□ 0.04
ARFGAP1-223ENST00000550188 PI4KAP1Q8N8J0 262 aa15.29■□□□□ 0.04
ARFGAP1-223ENST00000550188 CCDC191Q8NCU4 936 aa15.29■□□□□ 0.04
ARFGAP1-223ENST00000550188 CRAMP1Q96RY5 1269 aa15.29■□□□□ 0.04
ARFGAP1-223ENST00000550188 ARFGEF2Q9Y6D5 1785 aa15.29■□□□□ 0.04
ARFGAP1-223ENST00000550188 NEXNQ0ZGT2 675 aa15.28■□□□□ 0.04
ARFGAP1-223ENST00000550188 ZBTB38Q8NAP3 1195 aaPredicted RBP15.28■□□□□ 0.04
ARFGAP1-223ENST00000550188 ZNF428Q96B54 188 aa15.28■□□□□ 0.04
ARFGAP1-223ENST00000550188 FAM89AQ96GI7 184 aa15.28■□□□□ 0.04
ARFGAP1-223ENST00000550188 TAOK3Q9H2K8 898 aa15.28■□□□□ 0.04
ARFGAP1-223ENST00000550188 GPBP1L1Q9HC44 474 aaPredicted RBP15.28■□□□□ 0.04
ARFGAP1-223ENST00000550188 CWC25Q9NXE8 425 aaPredicted RBP15.28■□□□□ 0.04
ARFGAP1-223ENST00000550188 ZC3H4Q9UPT8 1303 aaKnown RBP15.27■□□□□ 0.04
ARFGAP1-223ENST00000550188 HSP90B1P14625 803 aaKnown RBP15.27■□□□□ 0.04
ARFGAP1-223ENST00000550188 SLFN5Q08AF3 891 aa15.27■□□□□ 0.04
ARFGAP1-223ENST00000550188 FKBP5Q13451 457 aaPredicted RBP15.27■□□□□ 0.04
ARFGAP1-223ENST00000550188 RTKN2Q8IZC4 609 aa15.27■□□□□ 0.04
ARFGAP1-223ENST00000550188 ZNF526Q8TF50 670 aaPredicted RBP15.27■□□□□ 0.04
ARFGAP1-223ENST00000550188 IRS4O14654 1257 aaPredicted RBP15.26■□□□□ 0.03
ARFGAP1-223ENST00000550188 PPEF1O14829 653 aaPredicted RBP15.26■□□□□ 0.03
ARFGAP1-223ENST00000550188 PRELPP51888 382 aa15.26■□□□□ 0.03
ARFGAP1-223ENST00000550188 CC2D2BQ6DHV5 1058 aa15.26■□□□□ 0.03
ARFGAP1-223ENST00000550188 SLX4Q8IY92 1834 aa15.26■□□□□ 0.03
ARFGAP1-223ENST00000550188 ABCC4O15439 1325 aa15.25■□□□□ 0.03
ARFGAP1-223ENST00000550188 PCCAP05165 728 aaPredicted RBP15.25■□□□□ 0.03
ARFGAP1-223ENST00000550188 IGKV5-2P06315 115 aa15.25■□□□□ 0.03
ARFGAP1-223ENST00000550188 FKBP4Q02790 459 aaKnown RBP eCLIP15.25■□□□□ 0.03
ARFGAP1-223ENST00000550188 RTL5Q5HYW3 569 aaPredicted RBP15.25■□□□□ 0.03
ARFGAP1-223ENST00000550188 DDX46Q7L014 1031 aaKnown RBP15.25■□□□□ 0.03
ARFGAP1-223ENST00000550188 GRIPAP1Q4V328 841 aa15.24■□□□□ 0.03
ARFGAP1-223ENST00000550188 OLFM4Q6UX06 510 aa15.24■□□□□ 0.03
ARFGAP1-223ENST00000550188 DNAAF4Q8WXU2 420 aa15.24■□□□□ 0.03
ARFGAP1-223ENST00000550188 CDCA7LQ96GN5 454 aa15.24■□□□□ 0.03
ARFGAP1-223ENST00000550188 TMX4Q9H1E5 349 aaPredicted RBP15.24■□□□□ 0.03
ARFGAP1-223ENST00000550188 NEURL1BA8MQ27 555 aa15.23■□□□□ 0.03
ARFGAP1-223ENST00000550188 BBOX1O75936 387 aa15.23■□□□□ 0.03
ARFGAP1-223ENST00000550188 GRAPQ13588 217 aa15.23■□□□□ 0.03
ARFGAP1-223ENST00000550188 SF3B3Q15393 1217 aaKnown RBP15.23■□□□□ 0.03
ARFGAP1-223ENST00000550188 CWF19L2Q2TBE0 894 aaKnown RBP15.23■□□□□ 0.03
ARFGAP1-223ENST00000550188 GRAPLQ8TC17 118 aaPredicted RBP15.23■□□□□ 0.03
ARFGAP1-223ENST00000550188 SNED1Q8TER0 1413 aa15.23■□□□□ 0.03
ARFGAP1-223ENST00000550188 KDM2BQ8NHM5 1336 aa15.22■□□□□ 0.03
ARFGAP1-223ENST00000550188 CDHR2Q9BYE9 1310 aa15.22■□□□□ 0.03
ARFGAP1-223ENST00000550188 TRMT2AQ8IZ69 625 aaKnown RBP15.22■□□□□ 0.03
ARFGAP1-223ENST00000550188 LINS1Q8NG48 757 aa15.22■□□□□ 0.03
ARFGAP1-223ENST00000550188 PSMD1Q99460 953 aa15.22■□□□□ 0.03
ARFGAP1-223ENST00000550188 ATP6V0A2Q9Y487 856 aa15.22■□□□□ 0.03
ARFGAP1-223ENST00000550188 FER1L6Q2WGJ9 1857 aa15.21■□□□□ 0.03
ARFGAP1-223ENST00000550188 PDE8AO60658 829 aa15.21■□□□□ 0.03
ARFGAP1-223ENST00000550188 TMC4Q7Z404 712 aa15.21■□□□□ 0.03
ARFGAP1-223ENST00000550188 ZNF277Q9NRM2 450 aaPredicted RBP15.21■□□□□ 0.03
ARFGAP1-223ENST00000550188 CACNA1SQ13698 1873 aa15.2■□□□□ 0.02
ARFGAP1-223ENST00000550188 DDX60Q8IY21 1712 aaKnown RBP15.2■□□□□ 0.02
ARFGAP1-223ENST00000550188 F6X3S4 739 aa15.2■□□□□ 0.02
ARFGAP1-223ENST00000550188 CT47B1P0C2W7 299 aaPredicted RBP15.2■□□□□ 0.02
ARFGAP1-223ENST00000550188 GCKRQ14397 625 aa15.2■□□□□ 0.02
ARFGAP1-223ENST00000550188 CCDC152Q4G0S7 254 aa15.2■□□□□ 0.02
ARFGAP1-223ENST00000550188 SP8Q8IXZ3 490 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms