RNA–Protein interactions for RNA: ENST00000550173.1

SLC38A1-208, Transcript of solute carrier family 38 member 1, humanhuman

TSL 5

Gene SLC38A1, Length 891 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-208ENST00000550173 HOXA10P31260 410 aaPredicted RBP26■■□□□ 1.75
SLC38A1-208ENST00000550173 TRIM35Q9UPQ4 493 aa26■■□□□ 1.75
SLC38A1-208ENST00000550173 IARSP41252 1262 aaKnown RBP25.99■■□□□ 1.75
SLC38A1-208ENST00000550173 AIMP1Q12904 312 aaKnown RBP25.99■■□□□ 1.75
SLC38A1-208ENST00000550173 RBM17Q96I25 401 aaKnown RBP25.99■■□□□ 1.75
SLC38A1-208ENST00000550173 KRT24Q2M2I5 525 aa25.98■■□□□ 1.75
SLC38A1-208ENST00000550173 IFFO2Q5TF58 517 aa25.98■■□□□ 1.75
SLC38A1-208ENST00000550173 CC2D2BQ6DHV5 1058 aa25.98■■□□□ 1.75
SLC38A1-208ENST00000550173 COPS6Q7L5N1 327 aa25.98■■□□□ 1.75
SLC38A1-208ENST00000550173 ZNF541Q9H0D2 1346 aa25.97■■□□□ 1.75
SLC38A1-208ENST00000550173 IQCA1LA6NCM1 817 aa25.97■■□□□ 1.75
SLC38A1-208ENST00000550173 CHADLQ6NUI6 762 aa25.97■■□□□ 1.75
SLC38A1-208ENST00000550173 XAGE3Q8WTP9 111 aa25.97■■□□□ 1.75
SLC38A1-208ENST00000550173 L3MBTL3Q96JM7 780 aaPredicted RBP25.97■■□□□ 1.75
SLC38A1-208ENST00000550173 CRAMP1Q96RY5 1269 aa25.97■■□□□ 1.75
SLC38A1-208ENST00000550173 PSMD1Q99460 953 aa25.97■■□□□ 1.75
SLC38A1-208ENST00000550173 UTP14AQ9BVJ6 771 aaKnown RBP25.97■■□□□ 1.75
SLC38A1-208ENST00000550173 PRKRIP1Q9H875 184 aaPredicted RBP25.97■■□□□ 1.75
SLC38A1-208ENST00000550173 POTEIP0CG38 1075 aa25.96■■□□□ 1.75
SLC38A1-208ENST00000550173 POTEJP0CG39 1038 aa25.96■■□□□ 1.75
SLC38A1-208ENST00000550173 C3orf67Q6ZVT6 689 aa25.96■■□□□ 1.75
SLC38A1-208ENST00000550173 JMYQ8N9B5 988 aa25.96■■□□□ 1.75
SLC38A1-208ENST00000550173 NLRP3Q96P20 1036 aa25.96■■□□□ 1.75
SLC38A1-208ENST00000550173 DDX21Q9NR30 783 aaKnown RBP eCLIP25.96■■□□□ 1.75
SLC38A1-208ENST00000550173 TCERG1O14776 1098 aaKnown RBP25.95■■□□□ 1.74
SLC38A1-208ENST00000550173 HSP90AB3PQ58FF7 597 aa25.95■■□□□ 1.74
SLC38A1-208ENST00000550173 SCN4AP35499 1836 aa25.94■■□□□ 1.74
SLC38A1-208ENST00000550173 JDP2Q8WYK2 163 aa25.94■■□□□ 1.74
SLC38A1-208ENST00000550173 SNED1Q8TER0 1413 aa25.94■■□□□ 1.74
SLC38A1-208ENST00000550173 FZD9O00144 591 aa25.93■■□□□ 1.74
SLC38A1-208ENST00000550173 PPEF1O14829 653 aaPredicted RBP25.93■■□□□ 1.74
SLC38A1-208ENST00000550173 SLC10A5Q5PT55 438 aa25.93■■□□□ 1.74
SLC38A1-208ENST00000550173 TAF1DQ9H5J8 278 aaPredicted RBP25.93■■□□□ 1.74
SLC38A1-208ENST00000550173 GRIPAP1Q4V328 841 aa25.92■■□□□ 1.74
SLC38A1-208ENST00000550173 HDGFL1Q5TGJ6 251 aa25.92■■□□□ 1.74
SLC38A1-208ENST00000550173 CHPF2Q9P2E5 772 aa25.92■■□□□ 1.74
SLC38A1-208ENST00000550173 ANKRD36CQ5JPF3 1778 aa25.92■■□□□ 1.74
SLC38A1-208ENST00000550173 RNF123Q5XPI4 1314 aa25.91■■□□□ 1.74
SLC38A1-208ENST00000550173 TCIRG1Q13488 830 aa25.91■■□□□ 1.74
SLC38A1-208ENST00000550173 NLRP10Q86W26 655 aa25.91■■□□□ 1.74
SLC38A1-208ENST00000550173 HACL1Q9UJ83 578 aa25.91■■□□□ 1.74
SLC38A1-208ENST00000550173 EAPPQ56P03 285 aaPredicted RBP25.9■■□□□ 1.74
SLC38A1-208ENST00000550173 SLC51AQ86UW1 340 aa25.9■■□□□ 1.74
SLC38A1-208ENST00000550173 LDHDQ86WU2 507 aa25.9■■□□□ 1.74
SLC38A1-208ENST00000550173 CFAP44Q96MT7 982 aa25.9■■□□□ 1.74
SLC38A1-208ENST00000550173 TMX4Q9H1E5 349 aaPredicted RBP25.9■■□□□ 1.74
SLC38A1-208ENST00000550173 HOXB7P09629 217 aa25.89■■□□□ 1.74
SLC38A1-208ENST00000550173 TRMT112Q9UI30 125 aaKnown RBP25.89■■□□□ 1.74
SLC38A1-208ENST00000550173 HCLS1P14317 486 aaPredicted RBP25.88■■□□□ 1.73
SLC38A1-208ENST00000550173 EIF6P56537 245 aaKnown RBP25.88■■□□□ 1.73
SLC38A1-208ENST00000550173 GPC2Q8N158 579 aa25.88■■□□□ 1.73
SLC38A1-208ENST00000550173 LARGE2Q8N3Y3 721 aa25.88■■□□□ 1.73
SLC38A1-208ENST00000550173 EPHX2P34913 555 aa25.87■■□□□ 1.73
SLC38A1-208ENST00000550173 CLEC11AQ9Y240 323 aa25.87■■□□□ 1.73
SLC38A1-208ENST00000550173 ABCC4O15439 1325 aa25.87■■□□□ 1.73
SLC38A1-208ENST00000550173 APAF1O14727 1248 aa25.86■■□□□ 1.73
SLC38A1-208ENST00000550173 DUSP27Q5VZP5 1158 aa25.86■■□□□ 1.73
SLC38A1-208ENST00000550173 MBIPQ9NS73 344 aa25.86■■□□□ 1.73
SLC38A1-208ENST00000550173 DBF4Q9UBU7 674 aaPredicted RBP25.86■■□□□ 1.73
SLC38A1-208ENST00000550173 ATP6V0A2Q9Y487 856 aa25.86■■□□□ 1.73
SLC38A1-208ENST00000550173 GJA3Q9Y6H8 435 aa25.86■■□□□ 1.73
SLC38A1-208ENST00000550173 SH3TC1Q8TE82 1336 aa25.86■■□□□ 1.73
SLC38A1-208ENST00000550173 COL4A5P29400 1685 aa25.85■■□□□ 1.73
SLC38A1-208ENST00000550173 ANKRD13DQ6ZTN6 518 aa25.85■■□□□ 1.73
SLC38A1-208ENST00000550173 PLBD2Q8NHP8 589 aa25.85■■□□□ 1.73
SLC38A1-208ENST00000550173 CREBZFQ9NS37 354 aa25.85■■□□□ 1.73
SLC38A1-208ENST00000550173 LAMB2P55268 1798 aa25.84■■□□□ 1.73
SLC38A1-208ENST00000550173 PNMA8AQ86V59 439 aaPredicted RBP25.84■■□□□ 1.73
SLC38A1-208ENST00000550173 ZNF428Q96B54 188 aa25.84■■□□□ 1.73
SLC38A1-208ENST00000550173 BBOX1O75936 387 aa25.83■■□□□ 1.73
SLC38A1-208ENST00000550173 DDX46Q7L014 1031 aaKnown RBP25.83■■□□□ 1.73
SLC38A1-208ENST00000550173 NIM1KQ8IY84 436 aa25.83■■□□□ 1.73
SLC38A1-208ENST00000550173 HYPKQ9NX55 129 aa25.83■■□□□ 1.73
SLC38A1-208ENST00000550173 PPIP5K2O43314 1243 aa25.82■■□□□ 1.72
SLC38A1-208ENST00000550173 ZNF853P0CG23 659 aa25.82■■□□□ 1.72
SLC38A1-208ENST00000550173 CALD1Q05682 793 aaKnown RBP25.81■■□□□ 1.72
SLC38A1-208ENST00000550173 AOC3Q16853 763 aa25.81■■□□□ 1.72
SLC38A1-208ENST00000550173 PASKQ96RG2 1323 aa25.81■■□□□ 1.72
SLC38A1-208ENST00000550173 LMOD1P29536 600 aaPredicted RBP25.8■■□□□ 1.72
SLC38A1-208ENST00000550173 GNAI1P63096 354 aa25.8■■□□□ 1.72
SLC38A1-208ENST00000550173 SP8Q8IXZ3 490 aa25.8■■□□□ 1.72
SLC38A1-208ENST00000550173 SUPT20HQ8NEM7 779 aa25.8■■□□□ 1.72
SLC38A1-208ENST00000550173 IFT57Q9NWB7 429 aa25.8■■□□□ 1.72
SLC38A1-208ENST00000550173 MKRN1Q9UHC7 482 aaKnown RBP25.8■■□□□ 1.72
SLC38A1-208ENST00000550173 ATP5J2-PTCD1G3V325 749 aa25.79■■□□□ 1.72
SLC38A1-208ENST00000550173 ITGBL1O95965 494 aaPredicted RBP25.79■■□□□ 1.72
SLC38A1-208ENST00000550173 GRAPQ13588 217 aa25.79■■□□□ 1.72
SLC38A1-208ENST00000550173 DPP8Q6V1X1 898 aaPredicted RBP25.79■■□□□ 1.72
SLC38A1-208ENST00000550173 GRAPLQ8TC17 118 aaPredicted RBP25.79■■□□□ 1.72
SLC38A1-208ENST00000550173 ISCA1Q9BUE6 129 aa25.79■■□□□ 1.72
SLC38A1-208ENST00000550173 VPS33BQ9H267 617 aa25.79■■□□□ 1.72
SLC38A1-208ENST00000550173 ADAMTSL1Q8N6G6 1762 aa25.78■■□□□ 1.72
SLC38A1-208ENST00000550173 ELL2O00472 640 aaPredicted RBP25.78■■□□□ 1.72
SLC38A1-208ENST00000550173 MPNDQ8N594 471 aa25.78■■□□□ 1.72
SLC38A1-208ENST00000550173 FAM89AQ96GI7 184 aa25.78■■□□□ 1.72
SLC38A1-208ENST00000550173 HSPA1AP0DMV8 641 aaKnown RBP25.77■■□□□ 1.72
SLC38A1-208ENST00000550173 HSPA1BP0DMV9 641 aaKnown RBP25.77■■□□□ 1.72
SLC38A1-208ENST00000550173 MAP1SQ66K74 1059 aaPredicted RBP25.77■■□□□ 1.72
SLC38A1-208ENST00000550173 RTFDC1Q9BY42 306 aaPredicted RBP25.77■■□□□ 1.72
SLC38A1-208ENST00000550173 TAF1P21675 1872 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms