RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 DNTTIP2Q5QJE6 756 aaKnown RBP12.3□□□□□ -0.44
ERBB3-214ENST00000550070 PLCD3Q8N3E9 789 aa12.3□□□□□ -0.44
ERBB3-214ENST00000550070 JARID2Q92833 1246 aaPredicted RBP12.3□□□□□ -0.44
ERBB3-214ENST00000550070 ZSWIM6Q9HCJ5 1215 aa12.3□□□□□ -0.44
ERBB3-214ENST00000550070 CLASRPQ8N2M8 674 aaKnown RBP12.29□□□□□ -0.44
ERBB3-214ENST00000550070 RUFY2Q8WXA3 655 aa12.29□□□□□ -0.44
ERBB3-214ENST00000550070 KCNB2Q92953 911 aa12.29□□□□□ -0.44
ERBB3-214ENST00000550070 PA2G4Q9UQ80 394 aaKnown RBP12.29□□□□□ -0.44
ERBB3-214ENST00000550070 MED1Q15648 1581 aaPredicted RBP12.29□□□□□ -0.44
ERBB3-214ENST00000550070 KDM3BQ7LBC6 1761 aa12.29□□□□□ -0.44
ERBB3-214ENST00000550070 MTX1Q13505 466 aa12.29□□□□□ -0.44
ERBB3-214ENST00000550070 ME3Q16798 604 aa12.29□□□□□ -0.44
ERBB3-214ENST00000550070 NBPF6Q5VWK0 638 aa12.29□□□□□ -0.44
ERBB3-214ENST00000550070 RGS22Q8NE09 1264 aa12.29□□□□□ -0.44
ERBB3-214ENST00000550070 MYRIPQ8NFW9 859 aa12.29□□□□□ -0.44
ERBB3-214ENST00000550070 NBPF4Q96M43 638 aa12.29□□□□□ -0.44
ERBB3-214ENST00000550070 ECHDC1Q9NTX5 307 aa12.29□□□□□ -0.44
ERBB3-214ENST00000550070 ZBTB22O15209 634 aa12.28□□□□□ -0.44
ERBB3-214ENST00000550070 HOXB7P09629 217 aa12.28□□□□□ -0.44
ERBB3-214ENST00000550070 COL9A3Q14050 684 aaPredicted RBP12.28□□□□□ -0.44
ERBB3-214ENST00000550070 NECTIN1Q15223 517 aa12.28□□□□□ -0.44
ERBB3-214ENST00000550070 TM6SF1Q9BZW5 370 aa12.28□□□□□ -0.44
ERBB3-214ENST00000550070 CYP46A1Q9Y6A2 500 aa12.28□□□□□ -0.44
ERBB3-214ENST00000550070 USP54Q70EL1 1684 aa12.28□□□□□ -0.44
ERBB3-214ENST00000550070 NECAB1Q8N987 351 aa12.28□□□□□ -0.44
ERBB3-214ENST00000550070 ZSCAN31Q96LW9 406 aaPredicted RBP12.28□□□□□ -0.44
ERBB3-214ENST00000550070 LTN1O94822 1766 aa12.28□□□□□ -0.44
ERBB3-214ENST00000550070 CLGNO14967 610 aa12.27□□□□□ -0.44
ERBB3-214ENST00000550070 DNAJC2Q99543 621 aaKnown RBP12.27□□□□□ -0.44
ERBB3-214ENST00000550070 SH2B1Q9NRF2 756 aaPredicted RBP12.27□□□□□ -0.44
ERBB3-214ENST00000550070 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.27□□□□□ -0.44
ERBB3-214ENST00000550070 VPS37CA5D8V6 355 aaPredicted RBP12.27□□□□□ -0.45
ERBB3-214ENST00000550070 FAM177A1Q8N128 213 aaPredicted RBP12.27□□□□□ -0.45
ERBB3-214ENST00000550070 CCDC171Q6TFL3 1326 aa12.26□□□□□ -0.45
ERBB3-214ENST00000550070 BTBD11A6QL63 1104 aa12.26□□□□□ -0.45
ERBB3-214ENST00000550070 IFIT2P09913 472 aaKnown RBP12.26□□□□□ -0.45
ERBB3-214ENST00000550070 MTERF4Q7Z6M4 381 aaKnown RBP12.26□□□□□ -0.45
ERBB3-214ENST00000550070 TSC1Q92574 1164 aa12.26□□□□□ -0.45
ERBB3-214ENST00000550070 TPCN1Q9ULQ1 816 aa12.26□□□□□ -0.45
ERBB3-214ENST00000550070 MAP3K2Q9Y2U5 619 aa12.26□□□□□ -0.45
ERBB3-214ENST00000550070 RBM8AQ9Y5S9 174 aaKnown RBP12.26□□□□□ -0.45
ERBB3-214ENST00000550070 ARHGAP23Q9P227 1491 aa12.26□□□□□ -0.45
ERBB3-214ENST00000550070 ANKARQ7Z5J8 1434 aa12.26□□□□□ -0.45
ERBB3-214ENST00000550070 SLIT1O75093 1534 aa12.26□□□□□ -0.45
ERBB3-214ENST00000550070 CREB3L3Q68CJ9 461 aa12.26□□□□□ -0.45
ERBB3-214ENST00000550070 GPATCH11Q8N954 259 aa12.26□□□□□ -0.45
ERBB3-214ENST00000550070 IP6K1Q92551 441 aa12.26□□□□□ -0.45
ERBB3-214ENST00000550070 EVI5LQ96CN4 794 aa12.26□□□□□ -0.45
ERBB3-214ENST00000550070 FAM227BQ96M60 508 aa12.26□□□□□ -0.45
ERBB3-214ENST00000550070 SPTLC3Q9NUV7 552 aa12.26□□□□□ -0.45
ERBB3-214ENST00000550070 C9orf78Q9NZ63 289 aaPredicted RBP12.26□□□□□ -0.45
ERBB3-214ENST00000550070 PROSER3Q2NL68 480 aa12.25□□□□□ -0.45
ERBB3-214ENST00000550070 CWF19L2Q2TBE0 894 aaKnown RBP12.25□□□□□ -0.45
ERBB3-214ENST00000550070 MPRIPQ6WCQ1 1025 aa12.25□□□□□ -0.45
ERBB3-214ENST00000550070 AACSQ86V21 672 aa12.25□□□□□ -0.45
ERBB3-214ENST00000550070 PRIMPOLQ96LW4 560 aa12.25□□□□□ -0.45
ERBB3-214ENST00000550070 RGPD2P0DJD1 1756 aa12.25□□□□□ -0.45
ERBB3-214ENST00000550070 KCNA6P17658 529 aa12.25□□□□□ -0.45
ERBB3-214ENST00000550070 TEFQ10587 303 aa12.25□□□□□ -0.45
ERBB3-214ENST00000550070 TTC6Q86TZ1 520 aa12.25□□□□□ -0.45
ERBB3-214ENST00000550070 MAP4K1Q92918 833 aa12.25□□□□□ -0.45
ERBB3-214ENST00000550070 KCNF1Q9H3M0 494 aa12.25□□□□□ -0.45
ERBB3-214ENST00000550070 DBF4Q9UBU7 674 aaPredicted RBP12.25□□□□□ -0.45
ERBB3-214ENST00000550070 ZKSCAN1P17029 563 aaPredicted RBP12.24□□□□□ -0.45
ERBB3-214ENST00000550070 NMIQ13287 307 aaPredicted RBP12.24□□□□□ -0.45
ERBB3-214ENST00000550070 LARP1BQ659C4 914 aaKnown RBP12.24□□□□□ -0.45
ERBB3-214ENST00000550070 FAM173BQ6P4H8 233 aa12.24□□□□□ -0.45
ERBB3-214ENST00000550070 GPATCH3Q96I76 525 aa12.24□□□□□ -0.45
ERBB3-214ENST00000550070 ALDH1L1O75891 902 aa12.24□□□□□ -0.45
ERBB3-214ENST00000550070 SASH1O94885 1247 aa12.24□□□□□ -0.45
ERBB3-214ENST00000550070 HMGN5P82970 282 aaKnown RBP12.24□□□□□ -0.45
ERBB3-214ENST00000550070 CDC37L1Q7L3B6 337 aa12.24□□□□□ -0.45
ERBB3-214ENST00000550070 FERMT3Q86UX7 667 aa12.24□□□□□ -0.45
ERBB3-214ENST00000550070 ERC1Q8IUD2 1116 aa12.24□□□□□ -0.45
ERBB3-214ENST00000550070 CHD2O14647 1828 aaKnown RBP12.24□□□□□ -0.45
ERBB3-214ENST00000550070 PRAMEF22A3QJZ6 481 aa12.24□□□□□ -0.45
ERBB3-214ENST00000550070 SLC27A2O14975 620 aa12.24□□□□□ -0.45
ERBB3-214ENST00000550070 GTF2F1P35269 517 aaKnown RBP eCLIP12.24□□□□□ -0.453e-8■■■□□ 17.7
ERBB3-214ENST00000550070 ZNF530Q6P9A1 599 aaPredicted RBP12.24□□□□□ -0.45
ERBB3-214ENST00000550070 KSR2Q6VAB6 950 aa12.24□□□□□ -0.45
ERBB3-214ENST00000550070 ZNF710Q8N1W2 664 aa12.24□□□□□ -0.45
ERBB3-214ENST00000550070 LRRC59Q96AG4 307 aaKnown RBP12.24□□□□□ -0.45
ERBB3-214ENST00000550070 EAF2Q96CJ1 260 aaPredicted RBP12.24□□□□□ -0.45
ERBB3-214ENST00000550070 KAZALD1Q96I82 304 aa12.24□□□□□ -0.45
ERBB3-214ENST00000550070 CCDC8Q9H0W5 538 aaPredicted RBP12.24□□□□□ -0.45
ERBB3-214ENST00000550070 PYCARDQ9ULZ3 195 aa12.24□□□□□ -0.45
ERBB3-214ENST00000550070 CHMP3Q9Y3E7 222 aa12.24□□□□□ -0.45
ERBB3-214ENST00000550070 LMO7Q8WWI1 1683 aa12.23□□□□□ -0.45
ERBB3-214ENST00000550070 CCDC192P0DO97 292 aa12.23□□□□□ -0.45
ERBB3-214ENST00000550070 LIG1P18858 919 aa12.23□□□□□ -0.45
ERBB3-214ENST00000550070 KCNJ4P48050 445 aa12.23□□□□□ -0.45
ERBB3-214ENST00000550070 AKAP4Q5JQC9 854 aa12.23□□□□□ -0.45
ERBB3-214ENST00000550070 SPC24Q8NBT2 197 aa12.23□□□□□ -0.45
ERBB3-214ENST00000550070 KIAA1524Q8TCG1 905 aa12.23□□□□□ -0.45
ERBB3-214ENST00000550070 TCEANC2Q96MN5 208 aa12.23□□□□□ -0.45
ERBB3-214ENST00000550070 TAF6LQ9Y6J9 622 aa12.23□□□□□ -0.45
ERBB3-214ENST00000550070 SUCLG2Q96I99 432 aa12.23□□□□□ -0.45
ERBB3-214ENST00000550070 TLR7Q9NYK1 1049 aaKnown RBP12.23□□□□□ -0.45
ERBB3-214ENST00000550070 A0A0D9SFI3 127 aa12.22□□□□□ -0.45
ERBB3-214ENST00000550070 FAM177BA6PVY3 158 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms