RNA–Protein interactions for RNA: ENST00000549659.1

NKX2-2-AS1-201, NKX2-2 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene NKX2-2-AS1, Length 638 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-AS1-201ENST00000549659 RPGRQ92834 1020 aaKnown RBP28.69■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 APAF1O14727 1248 aa28.68■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 HOXA10P31260 410 aaPredicted RBP28.68■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 POTECB2RU33 542 aa28.67■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 HOXB7P09629 217 aa28.67■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 HSP90AB3PQ58FF7 597 aa28.67■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 UTP14AQ9BVJ6 771 aaKnown RBP28.67■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 HDGFL1Q5TGJ6 251 aa28.66■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 ZNF277Q9NRM2 450 aaPredicted RBP28.66■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 CHPF2Q9P2E5 772 aa28.66■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 WDR90Q96KV7 1748 aa28.66■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 RBM17Q96I25 401 aaKnown RBP28.65■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 DDNO94850 711 aaPredicted RBP28.64■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 CC2D2BQ6DHV5 1058 aa28.64■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 NLRP3Q96P20 1036 aa28.64■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 CRAMP1Q96RY5 1269 aa28.64■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 MBIPQ9NS73 344 aa28.64■■■□□ 2.18
NKX2-2-AS1-201ENST00000549659 TCIRG1Q13488 830 aa28.63■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 SLC10A5Q5PT55 438 aa28.63■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 SYNE4Q8N205 404 aa28.63■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 ZNF853P0CG23 659 aa28.62■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 CALD1Q05682 793 aaKnown RBP28.62■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 DUSP27Q5VZP5 1158 aa28.62■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 C3orf67Q6ZVT6 689 aa28.62■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 NLRP10Q86W26 655 aa28.62■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 DNAJC5GQ8N7S2 189 aa28.62■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 DBF4Q9UBU7 674 aaPredicted RBP28.62■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 RNF123Q5XPI4 1314 aa28.62■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 IFT57Q9NWB7 429 aa28.61■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 IARSP41252 1262 aaKnown RBP28.6■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 GNAI1P63096 354 aa28.6■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 PSMD1Q99460 953 aa28.6■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 GRIPAP1Q4V328 841 aa28.59■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 SNED1Q8TER0 1413 aa28.59■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 ANKRD13DQ6ZTN6 518 aa28.58■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 PLBD2Q8NHP8 589 aa28.58■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 HYPKQ9NX55 129 aa28.58■■■□□ 2.17
NKX2-2-AS1-201ENST00000549659 ANKRD36CQ5JPF3 1778 aa28.57■■■□□ 2.16
NKX2-2-AS1-201ENST00000549659 PPEF1O14829 653 aaPredicted RBP28.57■■■□□ 2.16
NKX2-2-AS1-201ENST00000549659 HTRA3P83110 453 aa28.57■■■□□ 2.16
NKX2-2-AS1-201ENST00000549659 CCDC184Q52MB2 194 aa28.57■■■□□ 2.16
NKX2-2-AS1-201ENST00000549659 TRMT112Q9UI30 125 aaKnown RBP28.57■■■□□ 2.16
NKX2-2-AS1-201ENST00000549659 L3MBTL3Q96JM7 780 aaPredicted RBP28.56■■■□□ 2.16
NKX2-2-AS1-201ENST00000549659 ZNF541Q9H0D2 1346 aa28.55■■■□□ 2.16
NKX2-2-AS1-201ENST00000549659 TCERG1O14776 1098 aaKnown RBP28.55■■■□□ 2.16
NKX2-2-AS1-201ENST00000549659 SH3TC1Q8TE82 1336 aa28.54■■■□□ 2.16
NKX2-2-AS1-201ENST00000549659 IQCA1LA6NCM1 817 aa28.54■■■□□ 2.16
NKX2-2-AS1-201ENST00000549659 HCLS1P14317 486 aaPredicted RBP28.54■■■□□ 2.16
NKX2-2-AS1-201ENST00000549659 JDP2Q8WYK2 163 aa28.54■■■□□ 2.16
NKX2-2-AS1-201ENST00000549659 FZD9O00144 591 aa28.53■■■□□ 2.16
NKX2-2-AS1-201ENST00000549659 TMX4Q9H1E5 349 aaPredicted RBP28.53■■■□□ 2.16
NKX2-2-AS1-201ENST00000549659 ELL2O00472 640 aaPredicted RBP28.52■■■□□ 2.16
NKX2-2-AS1-201ENST00000549659 ABCC4O15439 1325 aa28.51■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 SLC51AQ86UW1 340 aa28.51■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 ISCA1Q9BUE6 129 aa28.51■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 ATP6V0A2Q9Y487 856 aa28.51■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 ZNF316A6NFI3 1004 aaPredicted RBP28.5■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 BBOX1O75936 387 aa28.5■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 CHADLQ6NUI6 762 aa28.5■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 KLRG1Q96E93 195 aa28.5■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 TAF1DQ9H5J8 278 aaPredicted RBP28.5■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 ATP5J2-PTCD1G3V325 749 aa28.49■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 POTEIP0CG38 1075 aa28.49■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 POTEJP0CG39 1038 aa28.49■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 DDX46Q7L014 1031 aaKnown RBP28.49■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 ZNF428Q96B54 188 aa28.49■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 SCN4AP35499 1836 aa28.48■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 LARGE2Q8N3Y3 721 aa28.48■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 C8orf58Q8NAV2 365 aa28.48■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 EIF6P56537 245 aaKnown RBP28.47■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 GPC2Q8N158 579 aa28.47■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 HACL1Q9UJ83 578 aa28.47■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 GOLGA2Q08379 1002 aa28.46■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 TRIM28Q13263 835 aaKnown RBP28.46■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 RIC3Q7Z5B4 369 aa28.46■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 SP8Q8IXZ3 490 aa28.46■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 FAM89AQ96GI7 184 aa28.46■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 CHMP4AQ9BY43 222 aa28.46■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 PHAXQ9H814 394 aaKnown RBP28.46■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 LAMB2P55268 1798 aa28.45■■■□□ 2.15
NKX2-2-AS1-201ENST00000549659 ANP32CO43423 234 aa28.45■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 GRAPQ13588 217 aa28.45■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 CCDC27Q2M243 656 aa28.45■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 LDHDQ86WU2 507 aa28.45■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 GRAPLQ8TC17 118 aaPredicted RBP28.45■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 CCDC30Q5VVM6 783 aa28.44■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 VPS33BQ9H267 617 aa28.44■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 MRS2Q9HD23 443 aa28.44■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 COL4A5P29400 1685 aa28.44■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 PPIP5K2O43314 1243 aa28.43■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 EPHX2P34913 555 aa28.43■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 NIM1KQ8IY84 436 aa28.43■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 SUPT20HQ8NEM7 779 aa28.43■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 RTFDC1Q9BY42 306 aaPredicted RBP28.43■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 EAPPQ56P03 285 aaPredicted RBP28.42■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 WWC1Q8IX03 1113 aa28.42■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 MPNDQ8N594 471 aa28.42■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 JMYQ8N9B5 988 aa28.42■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 GJA3Q9Y6H8 435 aa28.42■■■□□ 2.14
NKX2-2-AS1-201ENST00000549659 SF3B3Q15393 1217 aaKnown RBP28.41■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms