RNA–Protein interactions for RNA: ENST00000549612.5

ATF1-202, Transcript of activating transcription factor 1, humanhuman

TSL 5

Gene ATF1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1-202ENST00000549612 FSTL1Q12841 308 aa25.42■■□□□ 1.66
ATF1-202ENST00000549612 AIMP1Q12904 312 aaKnown RBP25.42■■□□□ 1.66
ATF1-202ENST00000549612 HSP90AB3PQ58FF7 597 aa25.42■■□□□ 1.66
ATF1-202ENST00000549612 RTKN2Q8IZC4 609 aa25.42■■□□□ 1.66
ATF1-202ENST00000549612 IFT57Q9NWB7 429 aa25.42■■□□□ 1.66
ATF1-202ENST00000549612 RNF123Q5XPI4 1314 aa25.41■■□□□ 1.66
ATF1-202ENST00000549612 VEGFAP15692 232 aaPredicted RBP25.41■■□□□ 1.66
ATF1-202ENST00000549612 CCDC184Q52MB2 194 aa25.41■■□□□ 1.66
ATF1-202ENST00000549612 DPY19L2Q6NUT2 758 aa25.41■■□□□ 1.66
ATF1-202ENST00000549612 OLFM4Q6UX06 510 aa25.41■■□□□ 1.66
ATF1-202ENST00000549612 RPGRQ92834 1020 aaKnown RBP25.41■■□□□ 1.66
ATF1-202ENST00000549612 UTP14AQ9BVJ6 771 aaKnown RBP25.41■■□□□ 1.66
ATF1-202ENST00000549612 SNED1Q8TER0 1413 aa25.4■■□□□ 1.66
ATF1-202ENST00000549612 APLP1P51693 650 aa25.4■■□□□ 1.66
ATF1-202ENST00000549612 DUSP27Q5VZP5 1158 aa25.4■■□□□ 1.66
ATF1-202ENST00000549612 DBF4Q9UBU7 674 aaPredicted RBP25.4■■□□□ 1.66
ATF1-202ENST00000549612 WDR90Q96KV7 1748 aa25.4■■□□□ 1.66
ATF1-202ENST00000549612 ZNF316A6NFI3 1004 aaPredicted RBP25.39■■□□□ 1.66
ATF1-202ENST00000549612 GNAI1P63096 354 aa25.39■■□□□ 1.66
ATF1-202ENST00000549612 TCIRG1Q13488 830 aa25.39■■□□□ 1.66
ATF1-202ENST00000549612 SLC10A5Q5PT55 438 aa25.39■■□□□ 1.66
ATF1-202ENST00000549612 ANKRD36CQ5JPF3 1778 aa25.39■■□□□ 1.65
ATF1-202ENST00000549612 C3orf67Q6ZVT6 689 aa25.38■■□□□ 1.65
ATF1-202ENST00000549612 NLRP10Q86W26 655 aa25.38■■□□□ 1.65
ATF1-202ENST00000549612 CRAMP1Q96RY5 1269 aa25.38■■□□□ 1.65
ATF1-202ENST00000549612 POTECB2RU33 542 aa25.37■■□□□ 1.65
ATF1-202ENST00000549612 CC2D2BQ6DHV5 1058 aa25.37■■□□□ 1.65
ATF1-202ENST00000549612 RBM17Q96I25 401 aaKnown RBP25.37■■□□□ 1.65
ATF1-202ENST00000549612 SMC1BQ8NDV3 1235 aa25.36■■□□□ 1.65
ATF1-202ENST00000549612 PLBD2Q8NHP8 589 aa25.36■■□□□ 1.65
ATF1-202ENST00000549612 NLRP3Q96P20 1036 aa25.36■■□□□ 1.65
ATF1-202ENST00000549612 PSMD1Q99460 953 aa25.36■■□□□ 1.65
ATF1-202ENST00000549612 ZNF277Q9NRM2 450 aaPredicted RBP25.36■■□□□ 1.65
ATF1-202ENST00000549612 HYPKQ9NX55 129 aa25.36■■□□□ 1.65
ATF1-202ENST00000549612 ANKRD13DQ6ZTN6 518 aa25.34■■□□□ 1.65
ATF1-202ENST00000549612 GRIPAP1Q4V328 841 aa25.33■■□□□ 1.65
ATF1-202ENST00000549612 SYNE4Q8N205 404 aa25.33■■□□□ 1.65
ATF1-202ENST00000549612 PPEF1O14829 653 aaPredicted RBP25.32■■□□□ 1.64
ATF1-202ENST00000549612 DDNO94850 711 aaPredicted RBP25.32■■□□□ 1.64
ATF1-202ENST00000549612 IARSP41252 1262 aaKnown RBP25.32■■□□□ 1.64
ATF1-202ENST00000549612 TRMT112Q9UI30 125 aaKnown RBP25.32■■□□□ 1.64
ATF1-202ENST00000549612 SH3TC1Q8TE82 1336 aa25.32■■□□□ 1.64
ATF1-202ENST00000549612 CCDC27Q2M243 656 aa25.31■■□□□ 1.64
ATF1-202ENST00000549612 ANP32CO43423 234 aa25.3■■□□□ 1.64
ATF1-202ENST00000549612 L3MBTL3Q96JM7 780 aaPredicted RBP25.3■■□□□ 1.64
ATF1-202ENST00000549612 ISCA1Q9BUE6 129 aa25.3■■□□□ 1.64
ATF1-202ENST00000549612 HCLS1P14317 486 aaPredicted RBP25.29■■□□□ 1.64
ATF1-202ENST00000549612 C8orf58Q8NAV2 365 aa25.29■■□□□ 1.64
ATF1-202ENST00000549612 MRS2Q9HD23 443 aa25.29■■□□□ 1.64
ATF1-202ENST00000549612 ABCC4O15439 1325 aa25.29■■□□□ 1.64
ATF1-202ENST00000549612 ZNF541Q9H0D2 1346 aa25.29■■□□□ 1.64
ATF1-202ENST00000549612 FZD9O00144 591 aa25.28■■□□□ 1.64
ATF1-202ENST00000549612 ELL2O00472 640 aaPredicted RBP25.28■■□□□ 1.64
ATF1-202ENST00000549612 SLC51AQ86UW1 340 aa25.28■■□□□ 1.64
ATF1-202ENST00000549612 DNAJC5GQ8N7S2 189 aa25.28■■□□□ 1.64
ATF1-202ENST00000549612 NCBP3Q53F19 620 aaKnown RBP25.27■■□□□ 1.64
ATF1-202ENST00000549612 ATP6V0A2Q9Y487 856 aa25.27■■□□□ 1.64
ATF1-202ENST00000549612 LAMB2P55268 1798 aa25.26■■□□□ 1.63
ATF1-202ENST00000549612 IQCA1LA6NCM1 817 aa25.26■■□□□ 1.63
ATF1-202ENST00000549612 TRIM28Q13263 835 aaKnown RBP25.26■■□□□ 1.63
ATF1-202ENST00000549612 WWC1Q8IX03 1113 aa25.26■■□□□ 1.63
ATF1-202ENST00000549612 CHMP4AQ9BY43 222 aa25.26■■□□□ 1.63
ATF1-202ENST00000549612 ATP5J2-PTCD1G3V325 749 aa25.25■■□□□ 1.63
ATF1-202ENST00000549612 GOLGA2Q08379 1002 aa25.25■■□□□ 1.63
ATF1-202ENST00000549612 PHAXQ9H814 394 aaKnown RBP25.25■■□□□ 1.63
ATF1-202ENST00000549612 COL4A5P29400 1685 aa25.25■■□□□ 1.63
ATF1-202ENST00000549612 TCERG1O14776 1098 aaKnown RBP25.24■■□□□ 1.63
ATF1-202ENST00000549612 BBOX1O75936 387 aa25.24■■□□□ 1.63
ATF1-202ENST00000549612 JDP2Q8WYK2 163 aa25.24■■□□□ 1.63
ATF1-202ENST00000549612 CCDC30Q5VVM6 783 aa25.23■■□□□ 1.63
ATF1-202ENST00000549612 DDX46Q7L014 1031 aaKnown RBP25.23■■□□□ 1.63
ATF1-202ENST00000549612 TSPYL6Q8N831 410 aa25.23■■□□□ 1.63
ATF1-202ENST00000549612 TSR2Q969E8 191 aaKnown RBP25.23■■□□□ 1.63
ATF1-202ENST00000549612 TMX4Q9H1E5 349 aaPredicted RBP25.23■■□□□ 1.63
ATF1-202ENST00000549612 IL16Q14005 1332 aa25.22■■□□□ 1.63
ATF1-202ENST00000549612 SCN4AP35499 1836 aa25.22■■□□□ 1.63
ATF1-202ENST00000549612 GRAPQ13588 217 aa25.22■■□□□ 1.63
ATF1-202ENST00000549612 RIC3Q7Z5B4 369 aa25.22■■□□□ 1.63
ATF1-202ENST00000549612 GRAPLQ8TC17 118 aaPredicted RBP25.22■■□□□ 1.63
ATF1-202ENST00000549612 ZNF428Q96B54 188 aa25.22■■□□□ 1.63
ATF1-202ENST00000549612 FAM89AQ96GI7 184 aa25.22■■□□□ 1.63
ATF1-202ENST00000549612 DDX60Q8IY21 1712 aaKnown RBP25.21■■□□□ 1.63
ATF1-202ENST00000549612 HTRA3P83110 453 aa25.21■■□□□ 1.63
ATF1-202ENST00000549612 SP8Q8IXZ3 490 aa25.21■■□□□ 1.63
ATF1-202ENST00000549612 GPC2Q8N158 579 aa25.21■■□□□ 1.63
ATF1-202ENST00000549612 TAF1DQ9H5J8 278 aaPredicted RBP25.21■■□□□ 1.63
ATF1-202ENST00000549612 POTEIP0CG38 1075 aa25.2■■□□□ 1.62
ATF1-202ENST00000549612 POTEJP0CG39 1038 aa25.2■■□□□ 1.62
ATF1-202ENST00000549612 CHADLQ6NUI6 762 aa25.2■■□□□ 1.62
ATF1-202ENST00000549612 LARGE2Q8N3Y3 721 aa25.2■■□□□ 1.62
ATF1-202ENST00000549612 RTFDC1Q9BY42 306 aaPredicted RBP25.2■■□□□ 1.62
ATF1-202ENST00000549612 VPS33BQ9H267 617 aa25.2■■□□□ 1.62
ATF1-202ENST00000549612 SF3B3Q15393 1217 aaKnown RBP25.19■■□□□ 1.62
ATF1-202ENST00000549612 EIF6P56537 245 aaKnown RBP25.18■■□□□ 1.62
ATF1-202ENST00000549612 TMC4Q7Z404 712 aa25.18■■□□□ 1.62
ATF1-202ENST00000549612 HACL1Q9UJ83 578 aa25.18■■□□□ 1.62
ATF1-202ENST00000549612 IRS4O14654 1257 aaPredicted RBP25.17■■□□□ 1.62
ATF1-202ENST00000549612 DDX58O95786 925 aaKnown RBP25.17■■□□□ 1.62
ATF1-202ENST00000549612 LDHDQ86WU2 507 aa25.17■■□□□ 1.62
ATF1-202ENST00000549612 ZBTB38Q8NAP3 1195 aaPredicted RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms