RNA–Protein interactions for RNA: ENST00000547392.5

CACNB3-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5 BASIC

Gene CACNB3, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-205ENST00000547392 ATP6V1DQ9Y5K8 247 aa25.92■■□□□ 1.74
CACNB3-205ENST00000547392 TATP17735 454 aaPredicted RBP25.92■■□□□ 1.74
CACNB3-205ENST00000547392 GCKRQ14397 625 aa25.92■■□□□ 1.74
CACNB3-205ENST00000547392 ADCK5Q3MIX3 580 aa25.92■■□□□ 1.74
CACNB3-205ENST00000547392 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.92■■□□□ 1.74
CACNB3-205ENST00000547392 F13A1P00488 732 aa25.91■■□□□ 1.74
CACNB3-205ENST00000547392 ZKSCAN1P17029 563 aaPredicted RBP25.91■■□□□ 1.74
CACNB3-205ENST00000547392 MSNP26038 577 aaKnown RBP25.91■■□□□ 1.74
CACNB3-205ENST00000547392 RBM8AQ9Y5S9 174 aaKnown RBP25.91■■□□□ 1.74
CACNB3-205ENST00000547392 COL15A1P39059 1388 aa25.9■■□□□ 1.74
CACNB3-205ENST00000547392 LARGE1O95461 756 aa25.9■■□□□ 1.74
CACNB3-205ENST00000547392 CPA1P15085 419 aa25.9■■□□□ 1.74
CACNB3-205ENST00000547392 NMIQ13287 307 aaPredicted RBP25.9■■□□□ 1.74
CACNB3-205ENST00000547392 SLC39A6Q13433 755 aa25.9■■□□□ 1.74
CACNB3-205ENST00000547392 CREB3L3Q68CJ9 461 aa25.9■■□□□ 1.74
CACNB3-205ENST00000547392 GDPD2Q9HCC8 539 aa25.9■■□□□ 1.74
CACNB3-205ENST00000547392 ZC3H6P61129 1189 aaKnown RBP25.9■■□□□ 1.74
CACNB3-205ENST00000547392 XAGE3Q8WTP9 111 aa25.9■■□□□ 1.74
CACNB3-205ENST00000547392 LRP10Q7Z4F1 713 aa25.89■■□□□ 1.74
CACNB3-205ENST00000547392 DDX17Q92841 729 aaKnown RBP25.89■■□□□ 1.74
CACNB3-205ENST00000547392 CCDC8Q9H0W5 538 aaPredicted RBP25.89■■□□□ 1.74
CACNB3-205ENST00000547392 PDIA4P13667 645 aaKnown RBP25.88■■□□□ 1.73
CACNB3-205ENST00000547392 CNPY2Q9Y2B0 182 aa25.88■■□□□ 1.73
CACNB3-205ENST00000547392 JCADQ9P266 1359 aa25.88■■□□□ 1.73
CACNB3-205ENST00000547392 LETM1O95202 739 aaPredicted RBP25.88■■□□□ 1.73
CACNB3-205ENST00000547392 MCM5P33992 734 aa25.88■■□□□ 1.73
CACNB3-205ENST00000547392 UBE2HP62256 183 aa25.88■■□□□ 1.73
CACNB3-205ENST00000547392 IFNL2Q8IZJ0 200 aa25.88■■□□□ 1.73
CACNB3-205ENST00000547392 FAM227BQ96M60 508 aa25.88■■□□□ 1.73
CACNB3-205ENST00000547392 ALDH8A1Q9H2A2 487 aaPredicted RBP25.88■■□□□ 1.73
CACNB3-205ENST00000547392 COPRSQ9NQ92 184 aa25.88■■□□□ 1.73
CACNB3-205ENST00000547392 NLRP2Q9NX02 1062 aa25.88■■□□□ 1.73
CACNB3-205ENST00000547392 TMEM94Q12767 1356 aa25.88■■□□□ 1.73
CACNB3-205ENST00000547392 MEGF6O75095 1541 aa25.88■■□□□ 1.73
CACNB3-205ENST00000547392 PSMA5P28066 241 aa25.87■■□□□ 1.73
CACNB3-205ENST00000547392 CCDC183Q5T5S1 534 aa25.87■■□□□ 1.73
CACNB3-205ENST00000547392 COPS6Q7L5N1 327 aa25.87■■□□□ 1.73
CACNB3-205ENST00000547392 LARP6Q9BRS8 491 aaKnown RBP25.87■■□□□ 1.73
CACNB3-205ENST00000547392 MED23Q9ULK4 1368 aa25.87■■□□□ 1.73
CACNB3-205ENST00000547392 ZNF500O60304 480 aaPredicted RBP25.87■■□□□ 1.73
CACNB3-205ENST00000547392 GJB2P29033 226 aa25.87■■□□□ 1.73
CACNB3-205ENST00000547392 CCDC83Q8IWF9 413 aa25.87■■□□□ 1.73
CACNB3-205ENST00000547392 NFATC2IPQ8NCF5 419 aa25.87■■□□□ 1.73
CACNB3-205ENST00000547392 TLR7Q9NYK1 1049 aaKnown RBP25.87■■□□□ 1.73
CACNB3-205ENST00000547392 OFD1O75665 1012 aa25.86■■□□□ 1.73
CACNB3-205ENST00000547392 UVSSAQ2YD98 709 aa25.86■■□□□ 1.73
CACNB3-205ENST00000547392 FOXD4L6Q3SYB3 417 aaPredicted RBP25.86■■□□□ 1.73
CACNB3-205ENST00000547392 FOXD4L3Q6VB84 417 aaPredicted RBP25.86■■□□□ 1.73
CACNB3-205ENST00000547392 FAM184AQ8NB25 1140 aa25.86■■□□□ 1.73
CACNB3-205ENST00000547392 MTMR6Q9Y217 621 aa25.86■■□□□ 1.73
CACNB3-205ENST00000547392 SLC27A2O14975 620 aa25.86■■□□□ 1.73
CACNB3-205ENST00000547392 SNRPA1P09661 255 aaKnown RBP25.86■■□□□ 1.73
CACNB3-205ENST00000547392 CSPP1Q1MSJ5 1256 aa25.86■■□□□ 1.73
CACNB3-205ENST00000547392 ZNF496Q96IT1 587 aaPredicted RBP25.86■■□□□ 1.73
CACNB3-205ENST00000547392 MYD88Q99836 296 aa25.86■■□□□ 1.73
CACNB3-205ENST00000547392 PKD1L3Q7Z443 1732 aa25.85■■□□□ 1.73
CACNB3-205ENST00000547392 MYL6BP14649 208 aa25.85■■□□□ 1.73
CACNB3-205ENST00000547392 ST3GAL1Q11201 340 aa25.85■■□□□ 1.73
CACNB3-205ENST00000547392 EPHA10Q5JZY3 1008 aa25.85■■□□□ 1.73
CACNB3-205ENST00000547392 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.85■■□□□ 1.73
CACNB3-205ENST00000547392 CCDC39Q9UFE4 941 aa25.85■■□□□ 1.73
CACNB3-205ENST00000547392 ANKRD13DQ6ZTN6 518 aa25.84■■□□□ 1.73
CACNB3-205ENST00000547392 DCAF5Q96JK2 942 aa25.84■■□□□ 1.73
CACNB3-205ENST00000547392 RFX5P48382 616 aaPredicted RBP25.84■■□□□ 1.73
CACNB3-205ENST00000547392 ME3Q16798 604 aa25.84■■□□□ 1.73
CACNB3-205ENST00000547392 TSGA10IPQ3SY00 556 aa25.84■■□□□ 1.73
CACNB3-205ENST00000547392 RNF20Q5VTR2 975 aa25.84■■□□□ 1.73
CACNB3-205ENST00000547392 FSD1Q9BTV5 496 aa25.84■■□□□ 1.73
CACNB3-205ENST00000547392 BOLA2Q9H3K6 86 aa25.84■■□□□ 1.73
CACNB3-205ENST00000547392 A0A0D9SFI3 127 aa25.83■■□□□ 1.73
CACNB3-205ENST00000547392 RABL6Q3YEC7 729 aaPredicted RBP25.83■■□□□ 1.73
CACNB3-205ENST00000547392 SIL1Q9H173 461 aa25.83■■□□□ 1.73
CACNB3-205ENST00000547392 ZKSCAN5Q9Y2L8 839 aa25.83■■□□□ 1.73
CACNB3-205ENST00000547392 KCNJ4P48050 445 aa25.83■■□□□ 1.72
CACNB3-205ENST00000547392 DCCP43146 1447 aa25.83■■□□□ 1.72
CACNB3-205ENST00000547392 RFX7Q2KHR2 1363 aa25.82■■□□□ 1.72
CACNB3-205ENST00000547392 ATP5JP18859 108 aa25.82■■□□□ 1.72
CACNB3-205ENST00000547392 RNF214Q8ND24 703 aa25.82■■□□□ 1.72
CACNB3-205ENST00000547392 HMG20BQ9P0W2 317 aa25.82■■□□□ 1.72
CACNB3-205ENST00000547392 AFDNP55196 1824 aaKnown RBP25.82■■□□□ 1.72
CACNB3-205ENST00000547392 ANKRD1Q15327 319 aa25.82■■□□□ 1.72
CACNB3-205ENST00000547392 PDZRN4Q6ZMN7 1036 aaPredicted RBP25.82■■□□□ 1.72
CACNB3-205ENST00000547392 TPM2P07951 284 aa25.81■■□□□ 1.72
CACNB3-205ENST00000547392 FMNL2Q96PY5 1086 aa25.81■■□□□ 1.72
CACNB3-205ENST00000547392 TPCN1Q9ULQ1 816 aa25.81■■□□□ 1.72
CACNB3-205ENST00000547392 USP16Q9Y5T5 823 aa25.81■■□□□ 1.72
CACNB3-205ENST00000547392 ARFGEF2Q9Y6D5 1785 aa25.81■■□□□ 1.72
CACNB3-205ENST00000547392 KLHDC4Q8TBB5 520 aa25.8■■□□□ 1.72
CACNB3-205ENST00000547392 LAMB4A4D0S4 1761 aa25.8■■□□□ 1.72
CACNB3-205ENST00000547392 TTC5Q8N0Z6 440 aa25.8■■□□□ 1.72
CACNB3-205ENST00000547392 TERF1P54274 439 aa25.79■■□□□ 1.72
CACNB3-205ENST00000547392 PTPN12Q05209 780 aaKnown RBP25.79■■□□□ 1.72
CACNB3-205ENST00000547392 USPL1Q5W0Q7 1092 aa25.79■■□□□ 1.72
CACNB3-205ENST00000547392 BLOC1S2Q6QNY1 142 aa25.79■■□□□ 1.72
CACNB3-205ENST00000547392 PARP4Q9UKK3 1724 aaKnown RBP25.79■■□□□ 1.72
CACNB3-205ENST00000547392 CYP27B1O15528 508 aa25.78■■□□□ 1.72
CACNB3-205ENST00000547392 RPS6KB1P23443 525 aa25.78■■□□□ 1.72
CACNB3-205ENST00000547392 TNNI3KQ59H18 835 aa25.78■■□□□ 1.72
CACNB3-205ENST00000547392 FPGT-TNNI3KV9GXZ4 949 aa25.78■■□□□ 1.72
CACNB3-205ENST00000547392 GLI3P10071 1580 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms