RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 AOX1Q06278 1338 aa13.84□□□□□ -0.19
DDB1-224ENST00000545894 PHF14O94880 888 aa13.84□□□□□ -0.19
DDB1-224ENST00000545894 TEFQ10587 303 aa13.84□□□□□ -0.19
DDB1-224ENST00000545894 FKBP5Q13451 457 aaPredicted RBP13.84□□□□□ -0.19
DDB1-224ENST00000545894 CCDC30Q5VVM6 783 aa13.84□□□□□ -0.19
DDB1-224ENST00000545894 PIGBQ92521 554 aa13.84□□□□□ -0.19
DDB1-224ENST00000545894 WDR33Q9C0J8 1336 aaKnown RBP13.83□□□□□ -0.2
DDB1-224ENST00000545894 SCN11AQ9UI33 1791 aa13.83□□□□□ -0.2
DDB1-224ENST00000545894 TAF7Q15545 349 aaPredicted RBP13.83□□□□□ -0.2
DDB1-224ENST00000545894 UPF3BQ9BZI7 483 aaKnown RBP13.83□□□□□ -0.2
DDB1-224ENST00000545894 ZMYND15Q9H091 742 aa13.83□□□□□ -0.2
DDB1-224ENST00000545894 TMOD3Q9NYL9 352 aa13.83□□□□□ -0.2
DDB1-224ENST00000545894 MRC1P22897 1456 aa13.83□□□□□ -0.2
DDB1-224ENST00000545894 DOT1LQ8TEK3 1739 aa13.82□□□□□ -0.2
DDB1-224ENST00000545894 UQCRHLA0A096LP55 91 aa13.82□□□□□ -0.2
DDB1-224ENST00000545894 UQCRHP07919 91 aa13.82□□□□□ -0.2
DDB1-224ENST00000545894 MAP7D2Q96T17 732 aa13.82□□□□□ -0.2
DDB1-224ENST00000545894 LRRFIP2Q9Y608 721 aaKnown RBP13.82□□□□□ -0.2
DDB1-224ENST00000545894 BTBD11A6QL63 1104 aa13.81□□□□□ -0.2
DDB1-224ENST00000545894 TRIM37O94972 964 aa13.81□□□□□ -0.2
DDB1-224ENST00000545894 HSPA4P34932 840 aa13.81□□□□□ -0.2
DDB1-224ENST00000545894 RBM10P98175 930 aaKnown RBP13.81□□□□□ -0.2
DDB1-224ENST00000545894 PTMAP06454 111 aaKnown RBP13.81□□□□□ -0.2
DDB1-224ENST00000545894 BCL11BQ9C0K0 894 aaPredicted RBP13.81□□□□□ -0.2
DDB1-224ENST00000545894 SOS1Q07889 1333 aaPredicted RBP13.81□□□□□ -0.2
DDB1-224ENST00000545894 KCNQ3O43525 872 aa13.8□□□□□ -0.2
DDB1-224ENST00000545894 GADD45BO75293 160 aaPredicted RBP13.8□□□□□ -0.2
DDB1-224ENST00000545894 SLC39A6Q13433 755 aa13.8□□□□□ -0.2
DDB1-224ENST00000545894 ILDR2Q71H61 639 aa13.8□□□□□ -0.2
DDB1-224ENST00000545894 USP48Q86UV5 1035 aa13.8□□□□□ -0.2
DDB1-224ENST00000545894 FAM184AQ8NB25 1140 aa13.8□□□□□ -0.2
DDB1-224ENST00000545894 SASS6Q6UVJ0 657 aa13.8□□□□□ -0.2
DDB1-224ENST00000545894 TMEM87AQ8NBN3 555 aa13.8□□□□□ -0.2
DDB1-224ENST00000545894 GDPD2Q9HCC8 539 aa13.8□□□□□ -0.2
DDB1-224ENST00000545894 FAM13BQ9NYF5 915 aa13.8□□□□□ -0.2
DDB1-224ENST00000545894 ASAP1Q9ULH1 1129 aa13.8□□□□□ -0.2
DDB1-224ENST00000545894 PXDNLA1KZ92 1463 aa13.8□□□□□ -0.2
DDB1-224ENST00000545894 DYNC1I1O14576 645 aa13.79□□□□□ -0.2
DDB1-224ENST00000545894 UBTFL1P0CB47 393 aaPredicted RBP13.79□□□□□ -0.2
DDB1-224ENST00000545894 UVSSAQ2YD98 709 aa13.79□□□□□ -0.2
DDB1-224ENST00000545894 FOXD4L6Q3SYB3 417 aaPredicted RBP13.79□□□□□ -0.2
DDB1-224ENST00000545894 FOXD4L3Q6VB84 417 aaPredicted RBP13.79□□□□□ -0.2
DDB1-224ENST00000545894 PKNOX2Q96KN3 472 aa13.79□□□□□ -0.2
DDB1-224ENST00000545894 USP44Q9H0E7 712 aa13.79□□□□□ -0.2
DDB1-224ENST00000545894 ATG3Q9NT62 314 aa13.79□□□□□ -0.2
DDB1-224ENST00000545894 NHSQ6T4R5 1651 aa13.79□□□□□ -0.2
DDB1-224ENST00000545894 RAB11FIP3O75154 756 aa13.79□□□□□ -0.2
DDB1-224ENST00000545894 KIAA2012Q0VF49 1180 aa13.79□□□□□ -0.2
DDB1-224ENST00000545894 SSH3Q8TE77 659 aa13.79□□□□□ -0.2
DDB1-224ENST00000545894 NECTIN2Q92692 538 aa13.79□□□□□ -0.2
DDB1-224ENST00000545894 IL25Q9H293 177 aa13.79□□□□□ -0.2
DDB1-224ENST00000545894 IL1RAPL2Q9NP60 686 aa13.79□□□□□ -0.2
DDB1-224ENST00000545894 EP400Q96L91 3159 aa13.78□□□□□ -0.2
DDB1-224ENST00000545894 SIPA1L3O60292 1781 aaPredicted RBP13.78□□□□□ -0.2
DDB1-224ENST00000545894 ITGB4P16144 1822 aa13.78□□□□□ -0.2
DDB1-224ENST00000545894 RPAP1Q9BWH6 1393 aaPredicted RBP13.78□□□□□ -0.2
DDB1-224ENST00000545894 BABAM1Q9NWV8 329 aa13.78□□□□□ -0.2
DDB1-224ENST00000545894 RAD50Q92878 1312 aa13.78□□□□□ -0.2
DDB1-224ENST00000545894 CCDC183Q5T5S1 534 aa13.78□□□□□ -0.2
DDB1-224ENST00000545894 ZNF790Q6PG37 636 aa13.78□□□□□ -0.2
DDB1-224ENST00000545894 NUTM1Q86Y26 1132 aa13.78□□□□□ -0.2
DDB1-224ENST00000545894 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
DDB1-224ENST00000545894 SBF2Q86WG5 1849 aa13.77□□□□□ -0.2
DDB1-224ENST00000545894 SGSM2O43147 1006 aa13.76□□□□□ -0.21
DDB1-224ENST00000545894 LETM1O95202 739 aaPredicted RBP13.76□□□□□ -0.21
DDB1-224ENST00000545894 MTERF4Q7Z6M4 381 aaKnown RBP13.76□□□□□ -0.21
DDB1-224ENST00000545894 N4BP2Q86UW6 1770 aaPredicted RBP13.76□□□□□ -0.21
DDB1-224ENST00000545894 SURF6O75683 361 aaKnown RBP13.76□□□□□ -0.21
DDB1-224ENST00000545894 ZSCAN22P10073 491 aaPredicted RBP13.76□□□□□ -0.21
DDB1-224ENST00000545894 POLA2Q14181 598 aa13.76□□□□□ -0.21
DDB1-224ENST00000545894 PI4K2BQ8TCG2 481 aa13.76□□□□□ -0.21
DDB1-224ENST00000545894 TTC14Q96N46 770 aa13.76□□□□□ -0.21
DDB1-224ENST00000545894 SNX14Q9Y5W7 946 aa13.76□□□□□ -0.21
DDB1-224ENST00000545894 RHPN1Q8TCX5 695 aa13.75□□□□□ -0.21
DDB1-224ENST00000545894 CNPY2Q9Y2B0 182 aa13.75□□□□□ -0.21
DDB1-224ENST00000545894 PTCD1O75127 700 aaKnown RBP13.75□□□□□ -0.21
DDB1-224ENST00000545894 EIF4A1P60842 406 aaKnown RBP13.75□□□□□ -0.21
DDB1-224ENST00000545894 PPP1R42Q7Z4L9 355 aa13.75□□□□□ -0.21
DDB1-224ENST00000545894 TTC5Q8N0Z6 440 aa13.75□□□□□ -0.21
DDB1-224ENST00000545894 CNTROBQ8N137 903 aa13.75□□□□□ -0.21
DDB1-224ENST00000545894 ZNF496Q96IT1 587 aaPredicted RBP13.75□□□□□ -0.21
DDB1-224ENST00000545894 LIMCH1Q9UPQ0 1083 aa13.75□□□□□ -0.21
DDB1-224ENST00000545894 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.75□□□□□ -0.21
DDB1-224ENST00000545894 MAP4K4O95819 1239 aaPredicted RBP13.74□□□□□ -0.21
DDB1-224ENST00000545894 APBA3O96018 575 aa13.74□□□□□ -0.21
DDB1-224ENST00000545894 UBE2HP62256 183 aa13.74□□□□□ -0.21
DDB1-224ENST00000545894 KIF1BPQ96EK5 621 aa13.74□□□□□ -0.21
DDB1-224ENST00000545894 LSG1Q9H089 658 aaKnown RBP13.74□□□□□ -0.21
DDB1-224ENST00000545894 PAPPAQ13219 1627 aa13.74□□□□□ -0.21
DDB1-224ENST00000545894 PALLDQ8WX93 1383 aa13.74□□□□□ -0.21
DDB1-224ENST00000545894 STX6O43752 255 aa13.74□□□□□ -0.21
DDB1-224ENST00000545894 AK2P54819 239 aa13.74□□□□□ -0.21
DDB1-224ENST00000545894 SMARCC1Q92922 1105 aaPredicted RBP13.74□□□□□ -0.21
DDB1-224ENST00000545894 SLC4A9Q96Q91 983 aa13.74□□□□□ -0.21
DDB1-224ENST00000545894 USP25Q9UHP3 1055 aa13.74□□□□□ -0.21
DDB1-224ENST00000545894 ATP6V1DQ9Y5K8 247 aa13.74□□□□□ -0.21
DDB1-224ENST00000545894 BTAF1O14981 1849 aa13.74□□□□□ -0.21
DDB1-224ENST00000545894 KCPQ6ZWJ8 1503 aa13.73□□□□□ -0.21
DDB1-224ENST00000545894 KDM3BQ7LBC6 1761 aa13.73□□□□□ -0.21
DDB1-224ENST00000545894 SYT1P21579 422 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms