RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 CWC15Q9P013 229 aaKnown RBP14.83□□□□□ -0.03
CHD4-211ENST00000544484 AKAP4Q5JQC9 854 aa14.83□□□□□ -0.03
CHD4-211ENST00000544484 PPP1R12BO60237 982 aaPredicted RBP14.83□□□□□ -0.04
CHD4-211ENST00000544484 DNA2P51530 1060 aa14.83□□□□□ -0.04
CHD4-211ENST00000544484 TAF4BQ92750 862 aa14.83□□□□□ -0.04
CHD4-211ENST00000544484 CACNA2D4Q7Z3S7 1137 aa14.83□□□□□ -0.04
CHD4-211ENST00000544484 CARD14Q9BXL6 1004 aa14.83□□□□□ -0.04
CHD4-211ENST00000544484 TMX1Q9H3N1 280 aa14.83□□□□□ -0.04
CHD4-211ENST00000544484 PHAXQ9H814 394 aaKnown RBP14.83□□□□□ -0.04
CHD4-211ENST00000544484 STX8Q9UNK0 236 aa14.83□□□□□ -0.04
CHD4-211ENST00000544484 ANKRD62A6NC57 917 aa14.83□□□□□ -0.04
CHD4-211ENST00000544484 PTPN14Q15678 1187 aa14.83□□□□□ -0.04
CHD4-211ENST00000544484 TMEM266Q2M3C6 531 aa14.83□□□□□ -0.04
CHD4-211ENST00000544484 UBXN4Q92575 508 aa14.83□□□□□ -0.04
CHD4-211ENST00000544484 TRMT1Q9NXH9 659 aaKnown RBP14.83□□□□□ -0.04
CHD4-211ENST00000544484 DUOX2Q9NRD8 1548 aa14.83□□□□□ -0.04
CHD4-211ENST00000544484 RLBP1P12271 317 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 ATP2B3Q16720 1220 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 KSR2Q6VAB6 950 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 KAT14Q9H8E8 782 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 NPHP3Q7Z494 1330 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 KLF18A0A0U1RQI7 1052 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 IDEP14735 1019 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 CWF19L2Q2TBE0 894 aaKnown RBP14.82□□□□□ -0.04
CHD4-211ENST00000544484 CCDC152Q4G0S7 254 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 LDHCP07864 332 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 PDE4BQ07343 736 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 FKBP15Q5T1M5 1219 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 CUL5Q93034 780 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 RAB34Q9BZG1 259 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 BAG3O95817 575 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 TTLL12Q14166 644 aaPredicted RBP14.82□□□□□ -0.04
CHD4-211ENST00000544484 TESK2Q96S53 571 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 RBM8AQ9Y5S9 174 aaKnown RBP14.82□□□□□ -0.04
CHD4-211ENST00000544484 HMGB2P26583 209 aaKnown RBP14.82□□□□□ -0.04
CHD4-211ENST00000544484 ATP8B2P98198 1209 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 TAF3Q5VWG9 929 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 FEZ1Q99689 392 aa14.82□□□□□ -0.04
CHD4-211ENST00000544484 SPA17Q15506 151 aa14.81□□□□□ -0.04
CHD4-211ENST00000544484 SCLT1Q96NL6 688 aa14.81□□□□□ -0.04
CHD4-211ENST00000544484 TSG101Q99816 390 aa14.81□□□□□ -0.04
CHD4-211ENST00000544484 DDX19AQ9NUU7 478 aaKnown RBP14.81□□□□□ -0.04
CHD4-211ENST00000544484 SEPT7Q16181 437 aaKnown RBP14.81□□□□□ -0.04
CHD4-211ENST00000544484 HMG20BQ9P0W2 317 aa14.81□□□□□ -0.04
CHD4-211ENST00000544484 LIG1P18858 919 aa14.81□□□□□ -0.04
CHD4-211ENST00000544484 CYP7A1P22680 504 aa14.81□□□□□ -0.04
CHD4-211ENST00000544484 CCDC102AQ96A19 550 aa14.81□□□□□ -0.04
CHD4-211ENST00000544484 F8W031 263 aaPredicted RBP14.81□□□□□ -0.04
CHD4-211ENST00000544484 MCM5P33992 734 aa14.81□□□□□ -0.04
CHD4-211ENST00000544484 CTAGE5O15320 804 aa14.8□□□□□ -0.04
CHD4-211ENST00000544484 URI1O94763 535 aaPredicted RBP14.8□□□□□ -0.04
CHD4-211ENST00000544484 ESYT1Q9BSJ8 1104 aa14.8□□□□□ -0.04
CHD4-211ENST00000544484 UQCRFS1P1P0C7P4 283 aa14.8□□□□□ -0.04
CHD4-211ENST00000544484 ANKRD18AQ8IVF6 992 aa14.8□□□□□ -0.04
CHD4-211ENST00000544484 EYA1Q99502 592 aa14.8□□□□□ -0.04
CHD4-211ENST00000544484 KIF5BP33176 963 aa14.8□□□□□ -0.04
CHD4-211ENST00000544484 VAMP4O75379 141 aa14.8□□□□□ -0.04
CHD4-211ENST00000544484 NUP88Q99567 741 aaPredicted RBP14.8□□□□□ -0.04
CHD4-211ENST00000544484 NIP7Q9Y221 180 aaKnown RBP eCLIP14.8□□□□□ -0.04
CHD4-211ENST00000544484 DMRT2Q9Y5R5 561 aa14.8□□□□□ -0.04
CHD4-211ENST00000544484 PARD3Q8TEW0 1356 aa14.8□□□□□ -0.04
CHD4-211ENST00000544484 HELBQ8NG08 1087 aaPredicted RBP14.79□□□□□ -0.04
CHD4-211ENST00000544484 EIF3JO75822 258 aaKnown RBP14.79□□□□□ -0.04
CHD4-211ENST00000544484 PRKCSHP14314 528 aaPredicted RBP14.79□□□□□ -0.04
CHD4-211ENST00000544484 HSPA2P54652 639 aa14.79□□□□□ -0.04
CHD4-211ENST00000544484 SLC4A4Q9Y6R1 1079 aa14.79□□□□□ -0.04
CHD4-211ENST00000544484 ALDH1L1O75891 902 aa14.79□□□□□ -0.04
CHD4-211ENST00000544484 WTAPQ15007 396 aa14.79□□□□□ -0.04
CHD4-211ENST00000544484 KIF4BQ2VIQ3 1234 aa14.79□□□□□ -0.04
CHD4-211ENST00000544484 SLC9C2Q5TAH2 1124 aa14.79□□□□□ -0.04
CHD4-211ENST00000544484 GIMAP6Q6P9H5 292 aa14.79□□□□□ -0.04
CHD4-211ENST00000544484 C8orf37Q96NL8 207 aa14.79□□□□□ -0.04
CHD4-211ENST00000544484 SETDB2Q96T68 719 aa14.79□□□□□ -0.04
CHD4-211ENST00000544484 ZNF165P49910 485 aa14.79□□□□□ -0.04
CHD4-211ENST00000544484 IQCEQ6IPM2 695 aa14.79□□□□□ -0.04
CHD4-211ENST00000544484 CCDC148Q8NFR7 591 aa14.79□□□□□ -0.04
CHD4-211ENST00000544484 TCP11L1Q9NUJ3 509 aa14.79□□□□□ -0.04
CHD4-211ENST00000544484 TDRD12Q587J7 1177 aaKnown RBP14.78□□□□□ -0.04
CHD4-211ENST00000544484 CRNKL1Q9BZJ0 848 aaKnown RBP14.78□□□□□ -0.04
CHD4-211ENST00000544484 PEG3Q9GZU2 1588 aa14.78□□□□□ -0.04
CHD4-211ENST00000544484 UBA7P41226 1012 aa14.78□□□□□ -0.04
CHD4-211ENST00000544484 TMC6Q7Z403 805 aa14.78□□□□□ -0.04
CHD4-211ENST00000544484 CCDC191Q8NCU4 936 aa14.78□□□□□ -0.04
CHD4-211ENST00000544484 ZSCAN12O43309 604 aa14.78□□□□□ -0.04
CHD4-211ENST00000544484 SPTY2D1Q68D10 685 aaPredicted RBP14.78□□□□□ -0.04
CHD4-211ENST00000544484 MYCNP04198 464 aaPredicted RBP14.78□□□□□ -0.04
CHD4-211ENST00000544484 DDB1Q16531 1140 aa14.78□□□□□ -0.04
CHD4-211ENST00000544484 C16orf45Q96MC5 204 aaPredicted RBP14.78□□□□□ -0.04
CHD4-211ENST00000544484 WWC3Q9ULE0 1092 aa14.78□□□□□ -0.04
CHD4-211ENST00000544484 FLT4P35916 1363 aa14.78□□□□□ -0.04
CHD4-211ENST00000544484 UBAP1LF5GYI3 381 aa14.77□□□□□ -0.04
CHD4-211ENST00000544484 GCP02774 474 aa14.77□□□□□ -0.04
CHD4-211ENST00000544484 MTIF2P46199 727 aaKnown RBP14.77□□□□□ -0.04
CHD4-211ENST00000544484 DHX37Q8IY37 1157 aaKnown RBP14.77□□□□□ -0.04
CHD4-211ENST00000544484 ZNF518AQ6AHZ1 1483 aa14.77□□□□□ -0.04
CHD4-211ENST00000544484 CCDC66A2RUB6 948 aa14.77□□□□□ -0.04
CHD4-211ENST00000544484 ADCY5O95622 1261 aa14.77□□□□□ -0.04
CHD4-211ENST00000544484 MCMDC2Q4G0Z9 681 aa14.77□□□□□ -0.04
CHD4-211ENST00000544484 SIRT1Q96EB6 747 aa14.77□□□□□ -0.04
CHD4-211ENST00000544484 POLR3AO14802 1390 aaPredicted RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms