RNA–Protein interactions for RNA: ENST00000544373.5

CHEK1-218, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-218ENST00000544373 LTBP3Q9NS15 1303 aa13.92□□□□□ -0.18
CHEK1-218ENST00000544373 GLTPD2A6NH11 291 aa13.92□□□□□ -0.18
CHEK1-218ENST00000544373 ANP32CO43423 234 aa13.92□□□□□ -0.18
CHEK1-218ENST00000544373 PARP10Q53GL7 1025 aa13.92□□□□□ -0.18
CHEK1-218ENST00000544373 NLRP10Q86W26 655 aa13.92□□□□□ -0.18
CHEK1-218ENST00000544373 C8orf58Q8NAV2 365 aa13.92□□□□□ -0.18
CHEK1-218ENST00000544373 MRS2Q9HD23 443 aa13.92□□□□□ -0.18
CHEK1-218ENST00000544373 TNRC6CQ9HCJ0 1690 aaKnown RBP13.92□□□□□ -0.18
CHEK1-218ENST00000544373 NUP98P52948 1817 aa13.92□□□□□ -0.18
CHEK1-218ENST00000544373 ZC3H4Q9UPT8 1303 aaKnown RBP13.92□□□□□ -0.18
CHEK1-218ENST00000544373 HSPA6P17066 643 aa13.91□□□□□ -0.18
CHEK1-218ENST00000544373 ALDH1B1P30837 517 aa13.91□□□□□ -0.18
CHEK1-218ENST00000544373 GNAI1P63096 354 aa13.91□□□□□ -0.18
CHEK1-218ENST00000544373 TCIRG1Q13488 830 aa13.91□□□□□ -0.18
CHEK1-218ENST00000544373 CCDC93Q567U6 631 aa13.91□□□□□ -0.18
CHEK1-218ENST00000544373 PPP1R42Q7Z4L9 355 aa13.91□□□□□ -0.18
CHEK1-218ENST00000544373 UTP14AQ9BVJ6 771 aaKnown RBP13.91□□□□□ -0.18
CHEK1-218ENST00000544373 DBF4Q9UBU7 674 aaPredicted RBP13.91□□□□□ -0.18
CHEK1-218ENST00000544373 IBTKQ9P2D0 1353 aaPredicted RBP13.91□□□□□ -0.18
CHEK1-218ENST00000544373 HOXA10P31260 410 aaPredicted RBP13.91□□□□□ -0.18
CHEK1-218ENST00000544373 SLC10A5Q5PT55 438 aa13.91□□□□□ -0.18
CHEK1-218ENST00000544373 SOGA3Q5TF21 947 aa13.91□□□□□ -0.18
CHEK1-218ENST00000544373 ZNF277Q9NRM2 450 aaPredicted RBP13.91□□□□□ -0.18
CHEK1-218ENST00000544373 POTECB2RU33 542 aa13.9□□□□□ -0.18
CHEK1-218ENST00000544373 HCLS1P14317 486 aaPredicted RBP13.9□□□□□ -0.18
CHEK1-218ENST00000544373 CALD1Q05682 793 aaKnown RBP13.9□□□□□ -0.18
CHEK1-218ENST00000544373 ANKRD13DQ6ZTN6 518 aa13.9□□□□□ -0.18
CHEK1-218ENST00000544373 RPGRQ92834 1020 aaKnown RBP13.9□□□□□ -0.18
CHEK1-218ENST00000544373 TSR2Q969E8 191 aaKnown RBP13.9□□□□□ -0.18
CHEK1-218ENST00000544373 TCERG1O14776 1098 aaKnown RBP13.89□□□□□ -0.19
CHEK1-218ENST00000544373 HSP90AB3PQ58FF7 597 aa13.89□□□□□ -0.19
CHEK1-218ENST00000544373 WWC1Q8IX03 1113 aa13.89□□□□□ -0.19
CHEK1-218ENST00000544373 TSPYL6Q8N831 410 aa13.89□□□□□ -0.19
CHEK1-218ENST00000544373 PLBD2Q8NHP8 589 aa13.89□□□□□ -0.19
CHEK1-218ENST00000544373 PHAXQ9H814 394 aaKnown RBP13.89□□□□□ -0.19
CHEK1-218ENST00000544373 HYPKQ9NX55 129 aa13.89□□□□□ -0.19
CHEK1-218ENST00000544373 ATP5J2-PTCD1G3V325 749 aa13.88□□□□□ -0.19
CHEK1-218ENST00000544373 FKBP4Q02790 459 aaKnown RBP eCLIP13.88□□□□□ -0.19
CHEK1-218ENST00000544373 C16orf71Q8IYS4 520 aaPredicted RBP13.88□□□□□ -0.19
CHEK1-218ENST00000544373 RBM46Q8TBY0 533 aaKnown RBP13.88□□□□□ -0.19
CHEK1-218ENST00000544373 RBM17Q96I25 401 aaKnown RBP13.88□□□□□ -0.19
CHEK1-218ENST00000544373 NLRP3Q96P20 1036 aa13.88□□□□□ -0.19
CHEK1-218ENST00000544373 TRMT112Q9UI30 125 aaKnown RBP13.88□□□□□ -0.19
CHEK1-218ENST00000544373 FER1L6Q2WGJ9 1857 aa13.88□□□□□ -0.19
CHEK1-218ENST00000544373 RIC1Q4ADV7 1423 aa13.88□□□□□ -0.19
CHEK1-218ENST00000544373 DDNO94850 711 aaPredicted RBP13.88□□□□□ -0.19
CHEK1-218ENST00000544373 CCDC27Q2M243 656 aa13.88□□□□□ -0.19
CHEK1-218ENST00000544373 DPY19L2Q6NUT2 758 aa13.88□□□□□ -0.19
CHEK1-218ENST00000544373 RTKN2Q8IZC4 609 aa13.88□□□□□ -0.19
CHEK1-218ENST00000544373 CRAMP1Q96RY5 1269 aa13.88□□□□□ -0.19
CHEK1-218ENST00000544373 SALL2Q9Y467 1007 aaPredicted RBP13.88□□□□□ -0.19
CHEK1-218ENST00000544373 U3KPZ7 1027 aaPredicted RBP13.88□□□□□ -0.19
CHEK1-218ENST00000544373 SNED1Q8TER0 1413 aa13.87□□□□□ -0.19
CHEK1-218ENST00000544373 VEGFAP15692 232 aaPredicted RBP13.87□□□□□ -0.19
CHEK1-218ENST00000544373 ISCA1Q9BUE6 129 aa13.87□□□□□ -0.19
CHEK1-218ENST00000544373 SH3TC1Q8TE82 1336 aa13.86□□□□□ -0.19
CHEK1-218ENST00000544373 CACNA1SQ13698 1873 aa13.86□□□□□ -0.19
CHEK1-218ENST00000544373 PPEF1O14829 653 aaPredicted RBP13.85□□□□□ -0.19
CHEK1-218ENST00000544373 RTL5Q5HYW3 569 aaPredicted RBP13.85□□□□□ -0.19
CHEK1-218ENST00000544373 FAM89AQ96GI7 184 aa13.85□□□□□ -0.19
CHEK1-218ENST00000544373 ABCC4O15439 1325 aa13.85□□□□□ -0.19
CHEK1-218ENST00000544373 HTRA3P83110 453 aa13.85□□□□□ -0.19
CHEK1-218ENST00000544373 PSMD1Q99460 953 aa13.85□□□□□ -0.19
CHEK1-218ENST00000544373 ARFGEF2Q9Y6D5 1785 aa13.84□□□□□ -0.19
CHEK1-218ENST00000544373 RNF123Q5XPI4 1314 aa13.84□□□□□ -0.19
CHEK1-218ENST00000544373 ZNF541Q9H0D2 1346 aa13.84□□□□□ -0.19
CHEK1-218ENST00000544373 CCDC88AQ3V6T2 1871 aa13.84□□□□□ -0.19
CHEK1-218ENST00000544373 TIAM2Q8IVF5 1701 aa13.84□□□□□ -0.19
CHEK1-218ENST00000544373 IARSP41252 1262 aaKnown RBP13.84□□□□□ -0.19
CHEK1-218ENST00000544373 RIC3Q7Z5B4 369 aa13.84□□□□□ -0.19
CHEK1-218ENST00000544373 GOLGA2Q08379 1002 aa13.83□□□□□ -0.2
CHEK1-218ENST00000544373 FSTL1Q12841 308 aa13.83□□□□□ -0.2
CHEK1-218ENST00000544373 TRIM28Q13263 835 aaKnown RBP13.83□□□□□ -0.2
CHEK1-218ENST00000544373 CC2D2BQ6DHV5 1058 aa13.83□□□□□ -0.2
CHEK1-218ENST00000544373 FAM9BQ8IZU0 186 aa13.83□□□□□ -0.2
CHEK1-218ENST00000544373 FZD9O00144 591 aa13.82□□□□□ -0.2
CHEK1-218ENST00000544373 POTEIP0CG38 1075 aa13.82□□□□□ -0.2
CHEK1-218ENST00000544373 POTEJP0CG39 1038 aa13.82□□□□□ -0.2
CHEK1-218ENST00000544373 APLP1P51693 650 aa13.82□□□□□ -0.2
CHEK1-218ENST00000544373 CCDC30Q5VVM6 783 aa13.82□□□□□ -0.2
CHEK1-218ENST00000544373 SMC1BQ8NDV3 1235 aa13.82□□□□□ -0.2
CHEK1-218ENST00000544373 MYD88Q99836 296 aa13.82□□□□□ -0.2
CHEK1-218ENST00000544373 ATP6V0A2Q9Y487 856 aa13.82□□□□□ -0.2
CHEK1-218ENST00000544373 COL4A5P29400 1685 aa13.82□□□□□ -0.2
CHEK1-218ENST00000544373 DNAJC5GQ8N7S2 189 aa13.82□□□□□ -0.2
CHEK1-218ENST00000544373 JARID2Q92833 1246 aaPredicted RBP13.82□□□□□ -0.2
CHEK1-218ENST00000544373 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
CHEK1-218ENST00000544373 PCNTO95613 3336 aa13.82□□□□□ -0.2
CHEK1-218ENST00000544373 BBOX1O75936 387 aa13.81□□□□□ -0.2
CHEK1-218ENST00000544373 TWISTNBQ3B726 338 aaPredicted RBP13.81□□□□□ -0.2
CHEK1-218ENST00000544373 DDX46Q7L014 1031 aaKnown RBP13.81□□□□□ -0.2
CHEK1-218ENST00000544373 G2E3Q7L622 706 aa13.81□□□□□ -0.2
CHEK1-218ENST00000544373 IL16Q14005 1332 aa13.81□□□□□ -0.2
CHEK1-218ENST00000544373 IRS4O14654 1257 aaPredicted RBP13.8□□□□□ -0.2
CHEK1-218ENST00000544373 GRAPQ13588 217 aa13.8□□□□□ -0.2
CHEK1-218ENST00000544373 GRAPLQ8TC17 118 aaPredicted RBP13.8□□□□□ -0.2
CHEK1-218ENST00000544373 JDP2Q8WYK2 163 aa13.8□□□□□ -0.2
CHEK1-218ENST00000544373 L3MBTL3Q96JM7 780 aaPredicted RBP13.8□□□□□ -0.2
CHEK1-218ENST00000544373 FANCIQ9NVI1 1328 aa13.8□□□□□ -0.2
CHEK1-218ENST00000544373 WDR90Q96KV7 1748 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms