RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 DDX10Q13206 875 aaKnown RBP15.7■□□□□ 0.1
GABPB1-206ENST00000543881 HLFQ16534 295 aa15.7■□□□□ 0.1
GABPB1-206ENST00000543881 SNED1Q8TER0 1413 aa15.69■□□□□ 0.1
GABPB1-206ENST00000543881 NEFMP07197 916 aa15.69■□□□□ 0.1
GABPB1-206ENST00000543881 GJA3Q9Y6H8 435 aa15.69■□□□□ 0.1
GABPB1-206ENST00000543881 LMOD1P29536 600 aaPredicted RBP15.68■□□□□ 0.1
GABPB1-206ENST00000543881 EIF6P56537 245 aaKnown RBP15.68■□□□□ 0.1
GABPB1-206ENST00000543881 RALBP1Q15311 655 aa15.68■□□□□ 0.1
GABPB1-206ENST00000543881 LTBP1Q14766 1721 aa15.68■□□□□ 0.1
GABPB1-206ENST00000543881 KDM3BQ7LBC6 1761 aa15.67■□□□□ 0.1
GABPB1-206ENST00000543881 FMR1Q06787 632 aaKnown RBP eCLIP15.67■□□□□ 0.1
GABPB1-206ENST00000543881 CRY2Q49AN0 593 aa15.67■□□□□ 0.1
GABPB1-206ENST00000543881 PAXIP1Q6ZW49 1069 aaPredicted RBP15.67■□□□□ 0.1
GABPB1-206ENST00000543881 CAPNS2Q96L46 248 aa15.67■□□□□ 0.1
GABPB1-206ENST00000543881 THSD7BQ9C0I4 1608 aa15.67■□□□□ 0.1
GABPB1-206ENST00000543881 COL4A5P29400 1685 aa15.67■□□□□ 0.1
GABPB1-206ENST00000543881 EPS15P42566 896 aa15.66■□□□□ 0.1
GABPB1-206ENST00000543881 ECE1P42892 770 aa15.66■□□□□ 0.1
GABPB1-206ENST00000543881 CC2D2BQ6DHV5 1058 aa15.66■□□□□ 0.1
GABPB1-206ENST00000543881 NUTM1Q86Y26 1132 aa15.66■□□□□ 0.1
GABPB1-206ENST00000543881 BEGAINQ9BUH8 593 aa15.66■□□□□ 0.1
GABPB1-206ENST00000543881 ABCC12Q96J65 1359 aa15.66■□□□□ 0.1
GABPB1-206ENST00000543881 SCNN1DP51172 638 aa15.65■□□□□ 0.1
GABPB1-206ENST00000543881 EIF4A1P60842 406 aaKnown RBP15.65■□□□□ 0.1
GABPB1-206ENST00000543881 GRM1Q13255 1194 aa15.65■□□□□ 0.1
GABPB1-206ENST00000543881 CYP4F22Q6NT55 531 aa15.65■□□□□ 0.1
GABPB1-206ENST00000543881 PNISRQ8TF01 805 aaKnown RBP15.65■□□□□ 0.1
GABPB1-206ENST00000543881 NYXQ9GZU5 481 aa15.65■□□□□ 0.1
GABPB1-206ENST00000543881 MAPK8IP3Q9UPT6 1336 aa15.65■□□□□ 0.1
GABPB1-206ENST00000543881 TRPM7Q96QT4 1865 aa15.65■□□□□ 0.1
GABPB1-206ENST00000543881 LAMB4A4D0S4 1761 aa15.65■□□□□ 0.1
GABPB1-206ENST00000543881 LARGE2Q8N3Y3 721 aa15.65■□□□□ 0.1
GABPB1-206ENST00000543881 RPGRQ92834 1020 aaKnown RBP15.65■□□□□ 0.1
GABPB1-206ENST00000543881 GPR101Q96P66 508 aaPredicted RBP15.65■□□□□ 0.1
GABPB1-206ENST00000543881 PNNQ9H307 717 aaKnown RBP15.65■□□□□ 0.1
GABPB1-206ENST00000543881 CCDC85CA6NKD9 419 aa15.64■□□□□ 0.09
GABPB1-206ENST00000543881 TRAF5O00463 557 aa15.64■□□□□ 0.09
GABPB1-206ENST00000543881 GRIPAP1Q4V328 841 aa15.64■□□□□ 0.09
GABPB1-206ENST00000543881 CST9Q5W186 159 aa15.64■□□□□ 0.09
GABPB1-206ENST00000543881 USP50Q70EL3 339 aaPredicted RBP15.64■□□□□ 0.09
GABPB1-206ENST00000543881 NGEFQ8N5V2 710 aa15.64■□□□□ 0.09
GABPB1-206ENST00000543881 NUP98P52948 1817 aa15.64■□□□□ 0.09
GABPB1-206ENST00000543881 HOXA10P31260 410 aaPredicted RBP15.63■□□□□ 0.09
GABPB1-206ENST00000543881 TLL2Q9Y6L7 1015 aa15.63■□□□□ 0.09
GABPB1-206ENST00000543881 MYBBP1AQ9BQG0 1328 aaKnown RBP15.62■□□□□ 0.09
GABPB1-206ENST00000543881 ERVV-1B6SEH8 477 aa15.62■□□□□ 0.09
GABPB1-206ENST00000543881 RIPK4P57078 832 aa15.62■□□□□ 0.09
GABPB1-206ENST00000543881 MLLT1Q03111 559 aaPredicted RBP15.62■□□□□ 0.09
GABPB1-206ENST00000543881 MAP3K15Q6ZN16 1313 aa15.61■□□□□ 0.09
GABPB1-206ENST00000543881 TCERG1O14776 1098 aaKnown RBP15.61■□□□□ 0.09
GABPB1-206ENST00000543881 TMPOP42166 694 aaKnown RBP15.61■□□□□ 0.09
GABPB1-206ENST00000543881 SLC51AQ86UW1 340 aa15.61■□□□□ 0.09
GABPB1-206ENST00000543881 NIM1KQ8IY84 436 aa15.61■□□□□ 0.09
GABPB1-206ENST00000543881 TSKSQ9UJT2 592 aa15.61■□□□□ 0.09
GABPB1-206ENST00000543881 RIC1Q4ADV7 1423 aa15.61■□□□□ 0.09
GABPB1-206ENST00000543881 PPEF1O14829 653 aaPredicted RBP15.6■□□□□ 0.09
GABPB1-206ENST00000543881 AOC2O75106 756 aa15.6■□□□□ 0.09
GABPB1-206ENST00000543881 MAP2K2P36507 400 aa15.6■□□□□ 0.09
GABPB1-206ENST00000543881 RGS19P49795 217 aa15.6■□□□□ 0.09
GABPB1-206ENST00000543881 RBM17Q96I25 401 aaKnown RBP15.6■□□□□ 0.09
GABPB1-206ENST00000543881 CRAMP1Q96RY5 1269 aa15.6■□□□□ 0.09
GABPB1-206ENST00000543881 RRP7AQ9Y3A4 280 aaKnown RBP15.6■□□□□ 0.09
GABPB1-206ENST00000543881 UBN2Q6ZU65 1347 aa15.6■□□□□ 0.09
GABPB1-206ENST00000543881 GPTP24298 496 aa15.59■□□□□ 0.09
GABPB1-206ENST00000543881 SUSD4Q5VX71 490 aa15.59■□□□□ 0.09
GABPB1-206ENST00000543881 KIF6Q6ZMV9 814 aa15.59■□□□□ 0.09
GABPB1-206ENST00000543881 TTLL7Q6ZT98 887 aa15.59■□□□□ 0.09
GABPB1-206ENST00000543881 CCDC146Q8IYE0 955 aa15.59■□□□□ 0.09
GABPB1-206ENST00000543881 ADARB2Q9NS39 739 aaKnown RBP15.59■□□□□ 0.09
GABPB1-206ENST00000543881 GPRC5DQ9NZD1 345 aa15.59■□□□□ 0.09
GABPB1-206ENST00000543881 TSPYL4Q9UJ04 414 aa15.59■□□□□ 0.09
GABPB1-206ENST00000543881 IBTKQ9P2D0 1353 aaPredicted RBP15.59■□□□□ 0.09
GABPB1-206ENST00000543881 PPIP5K2O43314 1243 aa15.59■□□□□ 0.09
GABPB1-206ENST00000543881 MYL6BP14649 208 aa15.59■□□□□ 0.09
GABPB1-206ENST00000543881 AOC3Q16853 763 aa15.59■□□□□ 0.09
GABPB1-206ENST00000543881 SAPCD2Q86UD0 394 aa15.58■□□□□ 0.08
GABPB1-206ENST00000543881 ZBTB3Q9H5J0 574 aa15.58■□□□□ 0.08
GABPB1-206ENST00000543881 CA12O43570 354 aa15.57■□□□□ 0.08
GABPB1-206ENST00000543881 CELF2O95319 508 aaKnown RBP15.57■□□□□ 0.08
GABPB1-206ENST00000543881 C3orf67Q6ZVT6 689 aa15.57■□□□□ 0.08
GABPB1-206ENST00000543881 LRP10Q7Z4F1 713 aa15.57■□□□□ 0.08
GABPB1-206ENST00000543881 TMX4Q9H1E5 349 aaPredicted RBP15.57■□□□□ 0.08
GABPB1-206ENST00000543881 VPS33BQ9H267 617 aa15.57■□□□□ 0.08
GABPB1-206ENST00000543881 NTSR2O95665 410 aa15.56■□□□□ 0.08
GABPB1-206ENST00000543881 CXCL9Q07325 125 aa15.56■□□□□ 0.08
GABPB1-206ENST00000543881 PDIA6Q15084 440 aa15.56■□□□□ 0.08
GABPB1-206ENST00000543881 NEUROD2Q15784 382 aa15.56■□□□□ 0.08
GABPB1-206ENST00000543881 ZNF34Q8IZ26 560 aa15.56■□□□□ 0.08
GABPB1-206ENST00000543881 ZNRF3Q9ULT6 936 aa15.56■□□□□ 0.08
GABPB1-206ENST00000543881 ADAMTS8Q9UP79 889 aa15.56■□□□□ 0.08
GABPB1-206ENST00000543881 CASP8AP2Q9UKL3 1982 aa15.56■□□□□ 0.08
GABPB1-206ENST00000543881 LMOD3Q0VAK6 560 aa15.55■□□□□ 0.08
GABPB1-206ENST00000543881 HHIPL1Q96JK4 782 aa15.55■□□□□ 0.08
GABPB1-206ENST00000543881 CFAP44Q96MT7 982 aa15.55■□□□□ 0.08
GABPB1-206ENST00000543881 NLRP3Q96P20 1036 aa15.55■□□□□ 0.08
GABPB1-206ENST00000543881 GLIS2Q9BZE0 524 aaPredicted RBP15.55■□□□□ 0.08
GABPB1-206ENST00000543881 MCOLN1Q9GZU1 580 aa15.55■□□□□ 0.08
GABPB1-206ENST00000543881 PRKRIP1Q9H875 184 aaPredicted RBP15.55■□□□□ 0.08
GABPB1-206ENST00000543881 BABAM1Q9NWV8 329 aa15.55■□□□□ 0.08
GABPB1-206ENST00000543881 TRIM35Q9UPQ4 493 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms