RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 ANKRD36CQ5JPF3 1778 aa7.42□□□□□ -1.22
ABCF1-207ENST00000542772 KLRG2A4D1S0 409 aaPredicted RBP7.42□□□□□ -1.22
ABCF1-207ENST00000542772 NTSR2O95665 410 aa7.42□□□□□ -1.22
ABCF1-207ENST00000542772 SERPINB2P05120 415 aa7.42□□□□□ -1.22
ABCF1-207ENST00000542772 AAMPQ13685 434 aa7.42□□□□□ -1.22
ABCF1-207ENST00000542772 MVPQ14764 893 aaKnown RBP7.42□□□□□ -1.22
ABCF1-207ENST00000542772 SLC4A10Q6U841 1118 aa7.42□□□□□ -1.22
ABCF1-207ENST00000542772 PPP1R42Q7Z4L9 355 aa7.42□□□□□ -1.22
ABCF1-207ENST00000542772 ZBTB38Q8NAP3 1195 aaPredicted RBP7.42□□□□□ -1.22
ABCF1-207ENST00000542772 PANK1Q8TE04 598 aa7.42□□□□□ -1.22
ABCF1-207ENST00000542772 PLA2G12BQ9BX93 195 aa7.42□□□□□ -1.22
ABCF1-207ENST00000542772 CWC25Q9NXE8 425 aaPredicted RBP7.42□□□□□ -1.22
ABCF1-207ENST00000542772 DDX19BQ9UMR2 479 aa7.42□□□□□ -1.22
ABCF1-207ENST00000542772 CDHR2Q9BYE9 1310 aa7.42□□□□□ -1.22
ABCF1-207ENST00000542772 NRXN2Q9P2S2 1712 aa7.41□□□□□ -1.22
ABCF1-207ENST00000542772 N4BP2Q86UW6 1770 aaPredicted RBP7.41□□□□□ -1.22
ABCF1-207ENST00000542772 PSDA5PKW4 1024 aaPredicted RBP7.41□□□□□ -1.22
ABCF1-207ENST00000542772 GRM8O00222 908 aa7.41□□□□□ -1.22
ABCF1-207ENST00000542772 MSH5O43196 834 aa7.41□□□□□ -1.22
ABCF1-207ENST00000542772 CSF1RP07333 972 aa7.41□□□□□ -1.22
ABCF1-207ENST00000542772 NBPF7P0C2Y1 421 aaPredicted RBP7.41□□□□□ -1.22
ABCF1-207ENST00000542772 GPTP24298 496 aa7.41□□□□□ -1.22
ABCF1-207ENST00000542772 DDR1Q08345 913 aa7.41□□□□□ -1.22
ABCF1-207ENST00000542772 KAZALD1Q96I82 304 aa7.41□□□□□ -1.22
ABCF1-207ENST00000542772 UTP14AQ9BVJ6 771 aaKnown RBP7.41□□□□□ -1.22
ABCF1-207ENST00000542772 NYXQ9GZU5 481 aa7.41□□□□□ -1.22
ABCF1-207ENST00000542772 CHMP4BQ9H444 224 aaKnown RBP7.41□□□□□ -1.22
ABCF1-207ENST00000542772 ZBTB40Q9NUA8 1239 aa7.41□□□□□ -1.22
ABCF1-207ENST00000542772 COG6Q9Y2V7 657 aa7.41□□□□□ -1.22
ABCF1-207ENST00000542772 GNAI3P08754 354 aa7.4□□□□□ -1.22
ABCF1-207ENST00000542772 MMP10P09238 476 aa7.4□□□□□ -1.22
ABCF1-207ENST00000542772 PTGER2P43116 358 aa7.4□□□□□ -1.22
ABCF1-207ENST00000542772 SF3B3Q15393 1217 aaKnown RBP7.4□□□□□ -1.22
ABCF1-207ENST00000542772 PRR5LQ6MZQ0 368 aa7.4□□□□□ -1.22
ABCF1-207ENST00000542772 BICDL1Q6ZP65 573 aa7.4□□□□□ -1.22
ABCF1-207ENST00000542772 FTSJ3Q8IY81 847 aaKnown RBP7.4□□□□□ -1.22
ABCF1-207ENST00000542772 SYNE4Q8N205 404 aa7.4□□□□□ -1.22
ABCF1-207ENST00000542772 FAM89AQ96GI7 184 aa7.4□□□□□ -1.22
ABCF1-207ENST00000542772 C9orf78Q9NZ63 289 aaPredicted RBP7.4□□□□□ -1.22
ABCF1-207ENST00000542772 TRMT112Q9UI30 125 aaKnown RBP7.4□□□□□ -1.22
ABCF1-207ENST00000542772 HDAC5Q9UQL6 1122 aa7.4□□□□□ -1.22
ABCF1-207ENST00000542772 PARP3Q9Y6F1 533 aa7.4□□□□□ -1.22
ABCF1-207ENST00000542772 CARMIL3Q8ND23 1372 aa7.4□□□□□ -1.22
ABCF1-207ENST00000542772 AFDNP55196 1824 aaKnown RBP7.4□□□□□ -1.23
ABCF1-207ENST00000542772 SH3TC1Q8TE82 1336 aa7.39□□□□□ -1.23
ABCF1-207ENST00000542772 PDE8AO60658 829 aa7.39□□□□□ -1.23
ABCF1-207ENST00000542772 ZBTB7AO95365 584 aa7.39□□□□□ -1.23
ABCF1-207ENST00000542772 HSP90B1P14625 803 aaKnown RBP7.39□□□□□ -1.23
ABCF1-207ENST00000542772 FOXO4P98177 505 aa7.39□□□□□ -1.23
ABCF1-207ENST00000542772 RABL6Q3YEC7 729 aaPredicted RBP7.39□□□□□ -1.23
ABCF1-207ENST00000542772 ERFEQ4G0M1 354 aa7.39□□□□□ -1.23
ABCF1-207ENST00000542772 NBPF5PQ86XG9 351 aaPredicted RBP7.39□□□□□ -1.23
ABCF1-207ENST00000542772 MEIS3Q99687 375 aa7.39□□□□□ -1.23
ABCF1-207ENST00000542772 BRIP1Q9BX63 1249 aa7.39□□□□□ -1.23
ABCF1-207ENST00000542772 ATF5Q9Y2D1 282 aaPredicted RBP7.39□□□□□ -1.23
ABCF1-207ENST00000542772 RIC1Q4ADV7 1423 aa7.38□□□□□ -1.23
ABCF1-207ENST00000542772 IRS4O14654 1257 aaPredicted RBP7.38□□□□□ -1.23
ABCF1-207ENST00000542772 GNAI2P04899 355 aa7.38□□□□□ -1.23
ABCF1-207ENST00000542772 ATP8B2P98198 1209 aa7.38□□□□□ -1.23
ABCF1-207ENST00000542772 MTX1Q13505 466 aa7.38□□□□□ -1.23
ABCF1-207ENST00000542772 EPHA10Q5JZY3 1008 aa7.38□□□□□ -1.23
ABCF1-207ENST00000542772 ERICH6BQ5W0A0 696 aa7.38□□□□□ -1.23
ABCF1-207ENST00000542772 MSL1Q68DK7 614 aa7.38□□□□□ -1.23
ABCF1-207ENST00000542772 ITPRIPQ8IWB1 547 aa7.38□□□□□ -1.23
ABCF1-207ENST00000542772 RPAP2Q8IXW5 612 aaPredicted RBP7.38□□□□□ -1.23
ABCF1-207ENST00000542772 TTLL11Q8NHH1 800 aa7.38□□□□□ -1.23
ABCF1-207ENST00000542772 JARID2Q92833 1246 aaPredicted RBP7.38□□□□□ -1.23
ABCF1-207ENST00000542772 SUCLG2Q96I99 432 aa7.38□□□□□ -1.23
ABCF1-207ENST00000542772 NLRP3Q96P20 1036 aa7.38□□□□□ -1.23
ABCF1-207ENST00000542772 CRBNQ96SW2 442 aa7.38□□□□□ -1.23
ABCF1-207ENST00000542772 SPON1Q9HCB6 807 aa7.38□□□□□ -1.23
ABCF1-207ENST00000542772 PDZRN3Q9UPQ7 1066 aa7.38□□□□□ -1.23
ABCF1-207ENST00000542772 FAM177BA6PVY3 158 aa7.37□□□□□ -1.23
ABCF1-207ENST00000542772 UBTFL1P0CB47 393 aaPredicted RBP7.37□□□□□ -1.23
ABCF1-207ENST00000542772 POLD1P28340 1107 aa7.37□□□□□ -1.23
ABCF1-207ENST00000542772 GTF2E1P29083 439 aaPredicted RBP7.37□□□□□ -1.23
ABCF1-207ENST00000542772 TGFB2P61812 414 aa7.37□□□□□ -1.23
ABCF1-207ENST00000542772 CRY2Q49AN0 593 aa7.37□□□□□ -1.23
ABCF1-207ENST00000542772 UBE3BQ7Z3V4 1068 aa7.37□□□□□ -1.23
ABCF1-207ENST00000542772 NUTM1Q86Y26 1132 aa7.37□□□□□ -1.23
ABCF1-207ENST00000542772 CNBD1Q8NA66 436 aa7.37□□□□□ -1.23
ABCF1-207ENST00000542772 EXOC6Q8TAG9 804 aa7.37□□□□□ -1.23
ABCF1-207ENST00000542772 KIF13BQ9NQT8 1826 aa7.36□□□□□ -1.23
ABCF1-207ENST00000542772 RTL9Q8NET4 1388 aa7.36□□□□□ -1.23
ABCF1-207ENST00000542772 DDX60Q8IY21 1712 aaKnown RBP7.36□□□□□ -1.23
ABCF1-207ENST00000542772 SRGNP10124 158 aa7.36□□□□□ -1.23
ABCF1-207ENST00000542772 HCLS1P14317 486 aaPredicted RBP7.36□□□□□ -1.23
ABCF1-207ENST00000542772 KCNA3P22001 575 aa7.36□□□□□ -1.23
ABCF1-207ENST00000542772 HOXA10P31260 410 aaPredicted RBP7.36□□□□□ -1.23
ABCF1-207ENST00000542772 PDE6BP35913 854 aa7.36□□□□□ -1.23
ABCF1-207ENST00000542772 ST5P78524 1137 aa7.36□□□□□ -1.23
ABCF1-207ENST00000542772 POLA2Q14181 598 aa7.36□□□□□ -1.23
ABCF1-207ENST00000542772 RTL5Q5HYW3 569 aaPredicted RBP7.36□□□□□ -1.23
ABCF1-207ENST00000542772 SIRT2Q8IXJ6 389 aa7.36□□□□□ -1.23
ABCF1-207ENST00000542772 ANKRD44Q8N8A2 993 aa7.36□□□□□ -1.23
ABCF1-207ENST00000542772 SSH3Q8TE77 659 aa7.36□□□□□ -1.23
ABCF1-207ENST00000542772 CD2APQ9Y5K6 639 aa7.36□□□□□ -1.23
ABCF1-207ENST00000542772 ANKRD31Q8N7Z5 1873 aa7.35□□□□□ -1.23
ABCF1-207ENST00000542772 RFX5P48382 616 aaPredicted RBP7.35□□□□□ -1.23
ABCF1-207ENST00000542772 CEP85Q6P2H3 762 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms