RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 LRP2BPQ9P2M1 347 aa18.94■□□□□ 0.62
VARS2-212ENST00000542001 TBX22Q9Y458 520 aa18.93■□□□□ 0.62
VARS2-212ENST00000542001 GOLGA8BA8MQT2 603 aa18.93■□□□□ 0.62
VARS2-212ENST00000542001 ZNF853P0CG23 659 aa18.93■□□□□ 0.62
VARS2-212ENST00000542001 ZNF165P49910 485 aa18.93■□□□□ 0.62
VARS2-212ENST00000542001 IMMTQ16891 758 aaKnown RBP18.93■□□□□ 0.62
VARS2-212ENST00000542001 ZMYND15Q9H091 742 aa18.93■□□□□ 0.62
VARS2-212ENST00000542001 PLEKHG3A1L390 1219 aa18.93■□□□□ 0.62
VARS2-212ENST00000542001 PTH1RQ03431 593 aa18.93■□□□□ 0.62
VARS2-212ENST00000542001 RASEFQ8IZ41 740 aa18.93■□□□□ 0.62
VARS2-212ENST00000542001 SETD1BQ9UPS6 1966 aaKnown RBP18.93■□□□□ 0.62
VARS2-212ENST00000542001 EIF4A1P60842 406 aaKnown RBP18.92■□□□□ 0.62
VARS2-212ENST00000542001 FSIP1Q8NA03 581 aa18.92■□□□□ 0.62
VARS2-212ENST00000542001 AIDAQ96BJ3 306 aa18.92■□□□□ 0.62
VARS2-212ENST00000542001 ZNF496Q96IT1 587 aaPredicted RBP18.92■□□□□ 0.62
VARS2-212ENST00000542001 SCAND2PQ9GZW5 306 aaPredicted RBP18.92■□□□□ 0.62
VARS2-212ENST00000542001 TMX1Q9H3N1 280 aa18.92■□□□□ 0.62
VARS2-212ENST00000542001 NAT10Q9H0A0 1025 aaKnown RBP18.92■□□□□ 0.62
VARS2-212ENST00000542001 SGSM2O43147 1006 aa18.92■□□□□ 0.62
VARS2-212ENST00000542001 A1BGP04217 495 aa18.92■□□□□ 0.62
VARS2-212ENST00000542001 C8orf76Q96K31 380 aa18.92■□□□□ 0.62
VARS2-212ENST00000542001 RAI14Q9P0K7 980 aa18.92■□□□□ 0.62
VARS2-212ENST00000542001 APOBRQ0VD83 1088 aa18.91■□□□□ 0.62
VARS2-212ENST00000542001 ERCC4Q92889 916 aaPredicted RBP18.91■□□□□ 0.62
VARS2-212ENST00000542001 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.91■□□□□ 0.622e-8■■■■■ 49.9
VARS2-212ENST00000542001 SEC62Q99442 399 aaKnown RBP18.91■□□□□ 0.62
VARS2-212ENST00000542001 NCOA5Q9HCD5 579 aaKnown RBP18.91■□□□□ 0.62
VARS2-212ENST00000542001 USP16Q9Y5T5 823 aa18.91■□□□□ 0.62
VARS2-212ENST00000542001 ANAPC15P60006 121 aa18.91■□□□□ 0.62
VARS2-212ENST00000542001 CWC25Q9NXE8 425 aaPredicted RBP18.91■□□□□ 0.62
VARS2-212ENST00000542001 SBNO1A3KN83 1393 aa18.9■□□□□ 0.62
VARS2-212ENST00000542001 DNAJC25Q9H1X3 360 aa18.9■□□□□ 0.62
VARS2-212ENST00000542001 OTUD7BQ6GQQ9 843 aa18.9■□□□□ 0.62
VARS2-212ENST00000542001 OLFM4Q6UX06 510 aa18.9■□□□□ 0.62
VARS2-212ENST00000542001 MYOM2P54296 1465 aa18.9■□□□□ 0.62
VARS2-212ENST00000542001 IQGAP3Q86VI3 1631 aa18.9■□□□□ 0.62
VARS2-212ENST00000542001 TMEM2Q9UHN6 1383 aa18.9■□□□□ 0.62
VARS2-212ENST00000542001 PIP4K2BP78356 416 aa18.9■□□□□ 0.62
VARS2-212ENST00000542001 ZNF790Q6PG37 636 aa18.9■□□□□ 0.62
VARS2-212ENST00000542001 TSC1Q92574 1164 aa18.9■□□□□ 0.62
VARS2-212ENST00000542001 NSFL1CQ9UNZ2 370 aaKnown RBP18.9■□□□□ 0.62
VARS2-212ENST00000542001 LUZP1Q86V48 1076 aa18.89■□□□□ 0.61
VARS2-212ENST00000542001 FAM89AQ96GI7 184 aa18.89■□□□□ 0.61
VARS2-212ENST00000542001 CCDC69A6NI79 296 aa18.89■□□□□ 0.61
VARS2-212ENST00000542001 TPM3P06753 285 aa18.89■□□□□ 0.61
VARS2-212ENST00000542001 ANO6Q4KMQ2 910 aa18.89■□□□□ 0.61
VARS2-212ENST00000542001 KLHL10Q6JEL2 608 aa18.89■□□□□ 0.61
VARS2-212ENST00000542001 EAF2Q96CJ1 260 aaPredicted RBP18.89■□□□□ 0.61
VARS2-212ENST00000542001 ZNF213O14771 459 aa18.89■□□□□ 0.61
VARS2-212ENST00000542001 CBX1P83916 185 aa18.89■□□□□ 0.61
VARS2-212ENST00000542001 GPT2Q8TD30 523 aa18.89■□□□□ 0.61
VARS2-212ENST00000542001 ORC3Q9UBD5 711 aaPredicted RBP18.89■□□□□ 0.61
VARS2-212ENST00000542001 ALDH1L1O75891 902 aa18.88■□□□□ 0.61
VARS2-212ENST00000542001 SART3Q15020 963 aaKnown RBP18.88■□□□□ 0.61
VARS2-212ENST00000542001 MNS1Q8NEH6 495 aa18.88■□□□□ 0.61
VARS2-212ENST00000542001 ADCK5Q3MIX3 580 aa18.88■□□□□ 0.61
VARS2-212ENST00000542001 DDX21Q9NR30 783 aaKnown RBP eCLIP18.88■□□□□ 0.61
VARS2-212ENST00000542001 CCDC171Q6TFL3 1326 aa18.88■□□□□ 0.61
VARS2-212ENST00000542001 JAK2O60674 1132 aa18.88■□□□□ 0.61
VARS2-212ENST00000542001 STARD3NLO95772 234 aa18.88■□□□□ 0.61
VARS2-212ENST00000542001 CCDC186Q7Z3E2 898 aa18.88■□□□□ 0.61
VARS2-212ENST00000542001 CEP57L1Q8IYX8 460 aa18.88■□□□□ 0.61
VARS2-212ENST00000542001 CLIP2Q9UDT6 1046 aa18.88■□□□□ 0.61
VARS2-212ENST00000542001 MARCKSP29966 332 aaPredicted RBP18.87■□□□□ 0.61
VARS2-212ENST00000542001 CCAR1Q8IX12 1150 aaKnown RBP18.87■□□□□ 0.61
VARS2-212ENST00000542001 CCDC112Q8NEF3 446 aa18.87■□□□□ 0.61
VARS2-212ENST00000542001 CTNNA3Q9UI47 895 aa18.87■□□□□ 0.61
VARS2-212ENST00000542001 TLR7Q9NYK1 1049 aaKnown RBP18.87■□□□□ 0.61
VARS2-212ENST00000542001 KLF18A0A0U1RQI7 1052 aa18.86■□□□□ 0.61
VARS2-212ENST00000542001 ACSBG1Q96GR2 724 aa18.86■□□□□ 0.61
VARS2-212ENST00000542001 CFAP100Q494V2 611 aa18.86■□□□□ 0.61
VARS2-212ENST00000542001 NAPBQ9H115 298 aa18.86■□□□□ 0.61
VARS2-212ENST00000542001 SPDYE4A6NLX3 237 aa18.85■□□□□ 0.61
VARS2-212ENST00000542001 HMGN5P82970 282 aaKnown RBP18.85■□□□□ 0.61
VARS2-212ENST00000542001 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.85■□□□□ 0.616e-8■■■■□ 19.5
VARS2-212ENST00000542001 ZKSCAN5Q9Y2L8 839 aa18.85■□□□□ 0.61
VARS2-212ENST00000542001 V9GYY5 206 aaPredicted RBP18.85■□□□□ 0.61
VARS2-212ENST00000542001 RUFY3Q7L099 469 aa18.85■□□□□ 0.61
VARS2-212ENST00000542001 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.85■□□□□ 0.61
VARS2-212ENST00000542001 A0A0D9SFI3 127 aa18.84■□□□□ 0.61
VARS2-212ENST00000542001 MCMDC2Q4G0Z9 681 aa18.84■□□□□ 0.61
VARS2-212ENST00000542001 ZCRB1Q8TBF4 217 aaKnown RBP18.84■□□□□ 0.61
VARS2-212ENST00000542001 TRIM22Q8IYM9 498 aa18.84■□□□□ 0.61
VARS2-212ENST00000542001 UBAC1Q9BSL1 405 aa18.84■□□□□ 0.61
VARS2-212ENST00000542001 E9PCH4 1651 aa18.84■□□□□ 0.61
VARS2-212ENST00000542001 CROCC2H7BZ55 1655 aa18.84■□□□□ 0.61
VARS2-212ENST00000542001 KIF1BO60333 1816 aa18.84■□□□□ 0.61
VARS2-212ENST00000542001 SSH3Q8TE77 659 aa18.84■□□□□ 0.61
VARS2-212ENST00000542001 MADDQ8WXG6 1647 aa18.83■□□□□ 0.61
VARS2-212ENST00000542001 MAP3K4Q9Y6R4 1608 aa18.83■□□□□ 0.61
VARS2-212ENST00000542001 GIGYF1O75420 1035 aaPredicted RBP18.83■□□□□ 0.61
VARS2-212ENST00000542001 CDC37L1Q7L3B6 337 aa18.83■□□□□ 0.61
VARS2-212ENST00000542001 IFIT3O14879 490 aaKnown RBP18.83■□□□□ 0.6
VARS2-212ENST00000542001 SLC27A2O14975 620 aa18.83■□□□□ 0.6
VARS2-212ENST00000542001 ATP2B2Q01814 1243 aa18.83■□□□□ 0.6
VARS2-212ENST00000542001 RAD50Q92878 1312 aa18.83■□□□□ 0.6
VARS2-212ENST00000542001 SKIDA1Q1XH10 827 aa18.83■□□□□ 0.6
VARS2-212ENST00000542001 PAG1Q9NWQ8 432 aa18.83■□□□□ 0.6
VARS2-212ENST00000542001 ME3Q16798 604 aa18.82■□□□□ 0.6
VARS2-212ENST00000542001 JAG2Q9Y219 1238 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms