RNA–Protein interactions for RNA: ENST00000541661.5

SCARB1-207, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 476 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-207ENST00000541661 JDP2Q8WYK2 163 aa17.35■□□□□ 0.37
SCARB1-207ENST00000541661 PRDM10Q9NQV6 1147 aa17.35■□□□□ 0.37
SCARB1-207ENST00000541661 RNF123Q5XPI4 1314 aa17.35■□□□□ 0.37
SCARB1-207ENST00000541661 KIF6Q6ZMV9 814 aa17.34■□□□□ 0.37
SCARB1-207ENST00000541661 CNTROBQ8N137 903 aa17.34■□□□□ 0.37
SCARB1-207ENST00000541661 RRP7AQ9Y3A4 280 aaKnown RBP17.34■□□□□ 0.37
SCARB1-207ENST00000541661 COL4A5P29400 1685 aa17.33■□□□□ 0.37
SCARB1-207ENST00000541661 UBN2Q6ZU65 1347 aa17.33■□□□□ 0.36
SCARB1-207ENST00000541661 RASSF10A6NK89 507 aa17.33■□□□□ 0.36
SCARB1-207ENST00000541661 ZNF34Q8IZ26 560 aa17.33■□□□□ 0.36
SCARB1-207ENST00000541661 CRAMP1Q96RY5 1269 aa17.33■□□□□ 0.36
SCARB1-207ENST00000541661 CTCFP49711 727 aaPredicted RBP17.32■□□□□ 0.36
SCARB1-207ENST00000541661 EIF6P56537 245 aaKnown RBP17.32■□□□□ 0.36
SCARB1-207ENST00000541661 NFE2L2Q16236 605 aa17.32■□□□□ 0.36
SCARB1-207ENST00000541661 SUSD4Q5VX71 490 aa17.32■□□□□ 0.36
SCARB1-207ENST00000541661 MAP1SQ66K74 1059 aaPredicted RBP17.32■□□□□ 0.36
SCARB1-207ENST00000541661 RPGRQ92834 1020 aaKnown RBP17.32■□□□□ 0.36
SCARB1-207ENST00000541661 WBP1LQ9NX94 342 aa17.32■□□□□ 0.36
SCARB1-207ENST00000541661 ERBB4Q15303 1308 aa17.31■□□□□ 0.36
SCARB1-207ENST00000541661 LTBP1Q14766 1721 aa17.31■□□□□ 0.36
SCARB1-207ENST00000541661 NTSR2O95665 410 aa17.31■□□□□ 0.36
SCARB1-207ENST00000541661 MYL6BP14649 208 aa17.31■□□□□ 0.36
SCARB1-207ENST00000541661 GPTP24298 496 aa17.31■□□□□ 0.36
SCARB1-207ENST00000541661 DEFB115Q30KQ5 88 aa17.31■□□□□ 0.36
SCARB1-207ENST00000541661 GIGYF2Q6Y7W6 1299 aaKnown RBP17.31■□□□□ 0.36
SCARB1-207ENST00000541661 AIDAQ96BJ3 306 aa17.31■□□□□ 0.36
SCARB1-207ENST00000541661 RBM17Q96I25 401 aaKnown RBP17.31■□□□□ 0.36
SCARB1-207ENST00000541661 ZBTB3Q9H5J0 574 aa17.31■□□□□ 0.36
SCARB1-207ENST00000541661 PNNQ9H307 717 aaKnown RBP17.3■□□□□ 0.36
SCARB1-207ENST00000541661 PARP10Q53GL7 1025 aa17.29■□□□□ 0.36
SCARB1-207ENST00000541661 PPP1R42Q7Z4L9 355 aa17.29■□□□□ 0.36
SCARB1-207ENST00000541661 THUMPD2Q9BTF0 503 aaKnown RBP17.29■□□□□ 0.36
SCARB1-207ENST00000541661 VPS33BQ9H267 617 aa17.29■□□□□ 0.36
SCARB1-207ENST00000541661 GJA3Q9Y6H8 435 aa17.29■□□□□ 0.36
SCARB1-207ENST00000541661 PPEF1O14829 653 aaPredicted RBP17.28■□□□□ 0.36
SCARB1-207ENST00000541661 LMOD1P29536 600 aaPredicted RBP17.28■□□□□ 0.36
SCARB1-207ENST00000541661 SCNN1DP51172 638 aa17.28■□□□□ 0.36
SCARB1-207ENST00000541661 SLC10A5Q5PT55 438 aa17.28■□□□□ 0.36
SCARB1-207ENST00000541661 LRP10Q7Z4F1 713 aa17.28■□□□□ 0.36
SCARB1-207ENST00000541661 LARGE2Q8N3Y3 721 aa17.28■□□□□ 0.36
SCARB1-207ENST00000541661 DDX21Q9NR30 783 aaKnown RBP eCLIP17.28■□□□□ 0.36
SCARB1-207ENST00000541661 EPS15P42566 896 aa17.27■□□□□ 0.36
SCARB1-207ENST00000541661 PDIA6Q15084 440 aa17.27■□□□□ 0.36
SCARB1-207ENST00000541661 C3orf67Q6ZVT6 689 aa17.27■□□□□ 0.36
SCARB1-207ENST00000541661 USP50Q70EL3 339 aaPredicted RBP17.27■□□□□ 0.36
SCARB1-207ENST00000541661 NLRP3Q96P20 1036 aa17.27■□□□□ 0.36
SCARB1-207ENST00000541661 TRPM7Q96QT4 1865 aa17.27■□□□□ 0.35
SCARB1-207ENST00000541661 WDR33Q9C0J8 1336 aaKnown RBP17.26■□□□□ 0.35
SCARB1-207ENST00000541661 MAP2K1Q02750 393 aaPredicted RBP17.26■□□□□ 0.35
SCARB1-207ENST00000541661 SLC51AQ86UW1 340 aa17.26■□□□□ 0.35
SCARB1-207ENST00000541661 ATP6V0A2Q9Y487 856 aa17.26■□□□□ 0.35
SCARB1-207ENST00000541661 LBX1P52954 281 aa17.25■□□□□ 0.35
SCARB1-207ENST00000541661 NIM1KQ8IY84 436 aa17.25■□□□□ 0.35
SCARB1-207ENST00000541661 BABAM1Q9NWV8 329 aa17.25■□□□□ 0.35
SCARB1-207ENST00000541661 ABT1Q9ULW3 272 aaKnown RBP17.25■□□□□ 0.35
SCARB1-207ENST00000541661 THSD7BQ9C0I4 1608 aa17.25■□□□□ 0.35
SCARB1-207ENST00000541661 MAPK8IP3Q9UPT6 1336 aa17.24■□□□□ 0.35
SCARB1-207ENST00000541661 TCERG1O14776 1098 aaKnown RBP17.24■□□□□ 0.35
SCARB1-207ENST00000541661 UTP14AQ9BVJ6 771 aaKnown RBP17.24■□□□□ 0.35
SCARB1-207ENST00000541661 RTFDC1Q9BY42 306 aaPredicted RBP17.24■□□□□ 0.35
SCARB1-207ENST00000541661 TMX4Q9H1E5 349 aaPredicted RBP17.24■□□□□ 0.35
SCARB1-207ENST00000541661 TSPYL4Q9UJ04 414 aa17.24■□□□□ 0.35
SCARB1-207ENST00000541661 ANKRD36CQ5JPF3 1778 aa17.24■□□□□ 0.35
SCARB1-207ENST00000541661 LAMB2P55268 1798 aa17.23■□□□□ 0.35
SCARB1-207ENST00000541661 PPIP5K2O43314 1243 aa17.23■□□□□ 0.35
SCARB1-207ENST00000541661 HSPA8P11142 646 aaKnown RBP17.23■□□□□ 0.35
SCARB1-207ENST00000541661 BBOX1O75936 387 aa17.22■□□□□ 0.35
SCARB1-207ENST00000541661 EIF2S2P20042 333 aaKnown RBP17.22■□□□□ 0.35
SCARB1-207ENST00000541661 FMR1Q06787 632 aaKnown RBP eCLIP17.22■□□□□ 0.35
SCARB1-207ENST00000541661 AOC3Q16853 763 aa17.22■□□□□ 0.35
SCARB1-207ENST00000541661 CST9Q5W186 159 aa17.22■□□□□ 0.35
SCARB1-207ENST00000541661 SP8Q8IXZ3 490 aa17.22■□□□□ 0.35
SCARB1-207ENST00000541661 SUPT20HQ8NEM7 779 aa17.22■□□□□ 0.35
SCARB1-207ENST00000541661 ADARB2Q9NS39 739 aaKnown RBP17.22■□□□□ 0.35
SCARB1-207ENST00000541661 GPRC5DQ9NZD1 345 aa17.22■□□□□ 0.35
SCARB1-207ENST00000541661 ZNRF3Q9ULT6 936 aa17.22■□□□□ 0.35
SCARB1-207ENST00000541661 ABCC4O15439 1325 aa17.21■□□□□ 0.35
SCARB1-207ENST00000541661 CXCL9Q07325 125 aa17.21■□□□□ 0.35
SCARB1-207ENST00000541661 PROSER3Q2NL68 480 aa17.21■□□□□ 0.35
SCARB1-207ENST00000541661 ECE1P42892 770 aa17.2■□□□□ 0.34
SCARB1-207ENST00000541661 RIPK4P57078 832 aa17.2■□□□□ 0.34
SCARB1-207ENST00000541661 HSP90AB3PQ58FF7 597 aa17.2■□□□□ 0.34
SCARB1-207ENST00000541661 NLRP10Q86W26 655 aa17.2■□□□□ 0.34
SCARB1-207ENST00000541661 CAPNS2Q96L46 248 aa17.2■□□□□ 0.34
SCARB1-207ENST00000541661 PGAP2Q9UHJ9 254 aa17.2■□□□□ 0.34
SCARB1-207ENST00000541661 TLL2Q9Y6L7 1015 aa17.2■□□□□ 0.34
SCARB1-207ENST00000541661 TRAF5O00463 557 aa17.19■□□□□ 0.34
SCARB1-207ENST00000541661 ANXA1P04083 346 aa17.19■□□□□ 0.34
SCARB1-207ENST00000541661 GPR101Q96P66 508 aaPredicted RBP17.19■□□□□ 0.34
SCARB1-207ENST00000541661 CDHR2Q9BYE9 1310 aa17.19■□□□□ 0.34
SCARB1-207ENST00000541661 KIAA2012Q0VF49 1180 aa17.18■□□□□ 0.34
SCARB1-207ENST00000541661 DPP8Q6V1X1 898 aaPredicted RBP17.18■□□□□ 0.34
SCARB1-207ENST00000541661 COPS6Q7L5N1 327 aa17.18■□□□□ 0.34
SCARB1-207ENST00000541661 MPNDQ8N594 471 aa17.18■□□□□ 0.34
SCARB1-207ENST00000541661 MAP2K2P36507 400 aa17.17■□□□□ 0.34
SCARB1-207ENST00000541661 TMPOP42166 694 aaKnown RBP17.17■□□□□ 0.34
SCARB1-207ENST00000541661 GMPSP49915 693 aaPredicted RBP17.17■□□□□ 0.34
SCARB1-207ENST00000541661 LMOD3Q0VAK6 560 aa17.17■□□□□ 0.34
SCARB1-207ENST00000541661 TCIRG1Q13488 830 aa17.17■□□□□ 0.34
SCARB1-207ENST00000541661 CIAPIN1Q6FI81 312 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms