RNA–Protein interactions for RNA: ENST00000540990.5

CACNB3-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2 BASIC

Gene CACNB3, Length 1,814 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-203ENST00000540990 KRT28Q7Z3Y7 464 aa20.16■□□□□ 0.82
CACNB3-203ENST00000540990 JAKMIP1Q96N16 626 aaKnown RBP20.16■□□□□ 0.82
CACNB3-203ENST00000540990 MED23Q9ULK4 1368 aa20.15■□□□□ 0.82
CACNB3-203ENST00000540990 ZNF790Q6PG37 636 aa20.15■□□□□ 0.82
CACNB3-203ENST00000540990 SLC52A2Q9HAB3 445 aa20.15■□□□□ 0.82
CACNB3-203ENST00000540990 GDPD2Q9HCC8 539 aa20.15■□□□□ 0.82
CACNB3-203ENST00000540990 MTMR6Q9Y217 621 aa20.15■□□□□ 0.82
CACNB3-203ENST00000540990 ZKSCAN1P17029 563 aaPredicted RBP20.14■□□□□ 0.81
CACNB3-203ENST00000540990 ST3GAL1Q11201 340 aa20.14■□□□□ 0.81
CACNB3-203ENST00000540990 CSPP1Q1MSJ5 1256 aa20.14■□□□□ 0.81
CACNB3-203ENST00000540990 CREB3L3Q68CJ9 461 aa20.14■□□□□ 0.81
CACNB3-203ENST00000540990 CNPY2Q9Y2B0 182 aa20.14■□□□□ 0.81
CACNB3-203ENST00000540990 RBM8AQ9Y5S9 174 aaKnown RBP20.14■□□□□ 0.81
CACNB3-203ENST00000540990 NPHP3Q7Z494 1330 aa20.14■□□□□ 0.81
CACNB3-203ENST00000540990 NEURL1BA8MQ27 555 aa20.13■□□□□ 0.81
CACNB3-203ENST00000540990 TSGA10IPQ3SY00 556 aa20.13■□□□□ 0.81
CACNB3-203ENST00000540990 LRP10Q7Z4F1 713 aa20.13■□□□□ 0.81
CACNB3-203ENST00000540990 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.13■□□□□ 0.81
CACNB3-203ENST00000540990 RFX7Q2KHR2 1363 aa20.13■□□□□ 0.81
CACNB3-203ENST00000540990 RGPD5Q99666 1765 aa20.13■□□□□ 0.81
CACNB3-203ENST00000540990 PSMA5P28066 241 aa20.13■□□□□ 0.81
CACNB3-203ENST00000540990 NMIQ13287 307 aaPredicted RBP20.13■□□□□ 0.81
CACNB3-203ENST00000540990 METTL22Q9BUU2 404 aaPredicted RBP20.13■□□□□ 0.81
CACNB3-203ENST00000540990 CPA1P15085 419 aa20.12■□□□□ 0.81
CACNB3-203ENST00000540990 GJB2P29033 226 aa20.12■□□□□ 0.81
CACNB3-203ENST00000540990 GCKRQ14397 625 aa20.12■□□□□ 0.81
CACNB3-203ENST00000540990 COPRSQ9NQ92 184 aa20.12■□□□□ 0.81
CACNB3-203ENST00000540990 SLC27A2O14975 620 aa20.11■□□□□ 0.81
CACNB3-203ENST00000540990 COL18A1P39060 1754 aa20.11■□□□□ 0.81
CACNB3-203ENST00000540990 TCHHQ07283 1943 aa20.11■□□□□ 0.81
CACNB3-203ENST00000540990 PHKG2P15735 406 aa20.11■□□□□ 0.81
CACNB3-203ENST00000540990 XPCQ01831 940 aaPredicted RBP20.11■□□□□ 0.81
CACNB3-203ENST00000540990 NEXNQ0ZGT2 675 aa20.11■□□□□ 0.81
CACNB3-203ENST00000540990 ME3Q16798 604 aa20.11■□□□□ 0.81
CACNB3-203ENST00000540990 RIC3Q7Z5B4 369 aa20.11■□□□□ 0.81
CACNB3-203ENST00000540990 CCDC83Q8IWF9 413 aa20.11■□□□□ 0.81
CACNB3-203ENST00000540990 FAM227BQ96M60 508 aa20.11■□□□□ 0.81
CACNB3-203ENST00000540990 RNF214Q8ND24 703 aa20.1■□□□□ 0.81
CACNB3-203ENST00000540990 FUCA2Q9BTY2 467 aa20.1■□□□□ 0.81
CACNB3-203ENST00000540990 HMG20BQ9P0W2 317 aa20.1■□□□□ 0.81
CACNB3-203ENST00000540990 ANKRD1Q15327 319 aa20.09■□□□□ 0.81
CACNB3-203ENST00000540990 RABL6Q3YEC7 729 aaPredicted RBP20.09■□□□□ 0.81
CACNB3-203ENST00000540990 RNF20Q5VTR2 975 aa20.09■□□□□ 0.81
CACNB3-203ENST00000540990 USPL1Q5W0Q7 1092 aa20.09■□□□□ 0.81
CACNB3-203ENST00000540990 RAPGEF4Q8WZA2 1011 aa20.09■□□□□ 0.81
CACNB3-203ENST00000540990 TLR7Q9NYK1 1049 aaKnown RBP20.09■□□□□ 0.81
CACNB3-203ENST00000540990 RRP9O43818 475 aaKnown RBP20.09■□□□□ 0.81
CACNB3-203ENST00000540990 RFX5P48382 616 aaPredicted RBP20.09■□□□□ 0.81
CACNB3-203ENST00000540990 CCDC8Q9H0W5 538 aaPredicted RBP20.09■□□□□ 0.81
CACNB3-203ENST00000540990 A0A0D9SFI3 127 aa20.08■□□□□ 0.8
CACNB3-203ENST00000540990 ATP5JP18859 108 aa20.08■□□□□ 0.8
CACNB3-203ENST00000540990 XAGE3Q8WTP9 111 aa20.08■□□□□ 0.8
CACNB3-203ENST00000540990 LARP6Q9BRS8 491 aaKnown RBP20.08■□□□□ 0.8
CACNB3-203ENST00000540990 TPCN1Q9ULQ1 816 aa20.08■□□□□ 0.8
CACNB3-203ENST00000540990 MEGF6O75095 1541 aa20.08■□□□□ 0.8
CACNB3-203ENST00000540990 TATP17735 454 aaPredicted RBP20.07■□□□□ 0.8
CACNB3-203ENST00000540990 AIMP1Q12904 312 aaKnown RBP20.07■□□□□ 0.8
CACNB3-203ENST00000540990 FOXD4L6Q3SYB3 417 aaPredicted RBP20.07■□□□□ 0.8
CACNB3-203ENST00000540990 EPHA10Q5JZY3 1008 aa20.07■□□□□ 0.8
CACNB3-203ENST00000540990 FOXD4L3Q6VB84 417 aaPredicted RBP20.07■□□□□ 0.8
CACNB3-203ENST00000540990 PKD1L3Q7Z443 1732 aa20.07■□□□□ 0.8
CACNB3-203ENST00000540990 C19orf44Q9H6X5 657 aa20.07■□□□□ 0.8
CACNB3-203ENST00000540990 COPS6Q7L5N1 327 aa20.06■□□□□ 0.8
CACNB3-203ENST00000540990 IFNL2Q8IZJ0 200 aa20.06■□□□□ 0.8
CACNB3-203ENST00000540990 ELP1O95163 1332 aa20.06■□□□□ 0.8
CACNB3-203ENST00000540990 GLI3P10071 1580 aa20.06■□□□□ 0.8
CACNB3-203ENST00000540990 SNRPA1P09661 255 aaKnown RBP20.06■□□□□ 0.8
CACNB3-203ENST00000540990 PDCP20941 246 aa20.06■□□□□ 0.8
CACNB3-203ENST00000540990 RPS6KB1P23443 525 aa20.06■□□□□ 0.8
CACNB3-203ENST00000540990 SLC39A6Q13433 755 aa20.06■□□□□ 0.8
CACNB3-203ENST00000540990 FSD1Q9BTV5 496 aa20.06■□□□□ 0.8
CACNB3-203ENST00000540990 BOLA2Q9H3K6 86 aa20.06■□□□□ 0.8
CACNB3-203ENST00000540990 LMOD2Q6P5Q4 547 aa20.05■□□□□ 0.8
CACNB3-203ENST00000540990 ANKRD13DQ6ZTN6 518 aa20.05■□□□□ 0.8
CACNB3-203ENST00000540990 TICAM2Q86XR7 235 aa20.05■□□□□ 0.8
CACNB3-203ENST00000540990 ZNF496Q96IT1 587 aaPredicted RBP20.05■□□□□ 0.8
CACNB3-203ENST00000540990 MYD88Q99836 296 aa20.05■□□□□ 0.8
CACNB3-203ENST00000540990 TMEM94Q12767 1356 aa20.05■□□□□ 0.8
CACNB3-203ENST00000540990 DCCP43146 1447 aa20.05■□□□□ 0.8
CACNB3-203ENST00000540990 TAF5LO75529 589 aa20.04■□□□□ 0.8
CACNB3-203ENST00000540990 DNM1Q05193 864 aaKnown RBP20.04■□□□□ 0.8
CACNB3-203ENST00000540990 BLOC1S2Q6QNY1 142 aa20.04■□□□□ 0.8
CACNB3-203ENST00000540990 DCAF5Q96JK2 942 aa20.04■□□□□ 0.8
CACNB3-203ENST00000540990 PARP4Q9UKK3 1724 aaKnown RBP20.04■□□□□ 0.8
CACNB3-203ENST00000540990 FIBPO43427 364 aa20.04■□□□□ 0.8
CACNB3-203ENST00000540990 KCNJ4P48050 445 aa20.04■□□□□ 0.8
CACNB3-203ENST00000540990 PTPN12Q05209 780 aaKnown RBP20.04■□□□□ 0.8
CACNB3-203ENST00000540990 KRT32Q14532 448 aa20.04■□□□□ 0.8
CACNB3-203ENST00000540990 PROSER2Q86WR7 435 aaPredicted RBP20.04■□□□□ 0.8
CACNB3-203ENST00000540990 NFATC2IPQ8NCF5 419 aa20.04■□□□□ 0.8
CACNB3-203ENST00000540990 CASP7P55210 303 aa20.03■□□□□ 0.8
CACNB3-203ENST00000540990 TOB2Q14106 344 aaPredicted RBP20.03■□□□□ 0.8
CACNB3-203ENST00000540990 LAMB4A4D0S4 1761 aa20.03■□□□□ 0.8
CACNB3-203ENST00000540990 TNNI3KQ59H18 835 aa20.02■□□□□ 0.8
CACNB3-203ENST00000540990 SIL1Q9H173 461 aa20.02■□□□□ 0.8
CACNB3-203ENST00000540990 DBNLQ9UJU6 430 aaKnown RBP20.02■□□□□ 0.8
CACNB3-203ENST00000540990 FPGT-TNNI3KV9GXZ4 949 aa20.02■□□□□ 0.8
CACNB3-203ENST00000540990 ARFGEF2Q9Y6D5 1785 aa20.02■□□□□ 0.8
CACNB3-203ENST00000540990 ZC3H6P61129 1189 aaKnown RBP20.02■□□□□ 0.79
CACNB3-203ENST00000540990 ZNF589Q86UQ0 364 aaPredicted RBP20.02■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms