RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 TMX3Q96JJ7 454 aa13.68□□□□□ -0.22
LGR5-203ENST00000540815 COL15A1P39059 1388 aa13.68□□□□□ -0.22
LGR5-203ENST00000540815 OFD1O75665 1012 aa13.68□□□□□ -0.22
LGR5-203ENST00000540815 SASH1O94885 1247 aa13.68□□□□□ -0.22
LGR5-203ENST00000540815 EPHA10Q5JZY3 1008 aa13.68□□□□□ -0.22
LGR5-203ENST00000540815 CUL4AQ13619 759 aa13.67□□□□□ -0.22
LGR5-203ENST00000540815 AACSQ86V21 672 aa13.67□□□□□ -0.22
LGR5-203ENST00000540815 ZSCAN30Q86W11 494 aa13.67□□□□□ -0.22
LGR5-203ENST00000540815 LSG1Q9H089 658 aaKnown RBP13.67□□□□□ -0.22
LGR5-203ENST00000540815 ZCRB1Q8TBF4 217 aaKnown RBP13.67□□□□□ -0.22
LGR5-203ENST00000540815 IGSF3O75054 1194 aa13.66□□□□□ -0.22
LGR5-203ENST00000540815 FGD1P98174 961 aa13.66□□□□□ -0.22
LGR5-203ENST00000540815 TOM1L2Q6ZVM7 507 aa13.66□□□□□ -0.22
LGR5-203ENST00000540815 ISY1Q9ULR0 285 aaKnown RBP13.66□□□□□ -0.22
LGR5-203ENST00000540815 ERVV-2B6SEH9 535 aa13.66□□□□□ -0.22
LGR5-203ENST00000540815 RUFY2Q8WXA3 655 aa13.66□□□□□ -0.22
LGR5-203ENST00000540815 EVI5LQ96CN4 794 aa13.66□□□□□ -0.22
LGR5-203ENST00000540815 PKP1Q13835 747 aa13.65□□□□□ -0.22
LGR5-203ENST00000540815 INTS4Q96HW7 963 aaKnown RBP13.65□□□□□ -0.22
LGR5-203ENST00000540815 DIAPH3Q9NSV4 1193 aa13.65□□□□□ -0.22
LGR5-203ENST00000540815 NKX1-1Q15270 411 aaPredicted RBP13.65□□□□□ -0.22
LGR5-203ENST00000540815 CWC27Q6UX04 472 aaKnown RBP13.65□□□□□ -0.22
LGR5-203ENST00000540815 PLBD2Q8NHP8 589 aa13.65□□□□□ -0.22
LGR5-203ENST00000540815 KLHDC4Q8TBB5 520 aa13.65□□□□□ -0.22
LGR5-203ENST00000540815 EAF2Q96CJ1 260 aaPredicted RBP13.65□□□□□ -0.22
LGR5-203ENST00000540815 CARD10Q9BWT7 1032 aa13.65□□□□□ -0.22
LGR5-203ENST00000540815 NHSL1Q5SYE7 1610 aa13.65□□□□□ -0.22
LGR5-203ENST00000540815 NUP188Q5SRE5 1749 aa13.65□□□□□ -0.22
LGR5-203ENST00000540815 KCPQ6ZWJ8 1503 aa13.64□□□□□ -0.23
LGR5-203ENST00000540815 NBPF26B4DH59 902 aa13.64□□□□□ -0.23
LGR5-203ENST00000540815 NBPF14Q5TI25 921 aa13.64□□□□□ -0.23
LGR5-203ENST00000540815 NBPF10Q6P3W6 841 aaKnown RBP13.64□□□□□ -0.23
LGR5-203ENST00000540815 NBPF15Q8N660 670 aa13.64□□□□□ -0.23
LGR5-203ENST00000540815 ZDHHC9Q9Y397 364 aa13.64□□□□□ -0.23
LGR5-203ENST00000540815 DDX49Q9Y6V7 483 aaKnown RBP13.64□□□□□ -0.23
LGR5-203ENST00000540815 SNX14Q9Y5W7 946 aa13.64□□□□□ -0.23
LGR5-203ENST00000540815 IL2RBP14784 551 aa13.63□□□□□ -0.23
LGR5-203ENST00000540815 RABL6Q3YEC7 729 aaPredicted RBP13.63□□□□□ -0.23
LGR5-203ENST00000540815 COPRSQ9NQ92 184 aa13.63□□□□□ -0.23
LGR5-203ENST00000540815 UPF3BQ9BZI7 483 aaKnown RBP13.63□□□□□ -0.23
LGR5-203ENST00000540815 TLR7Q9NYK1 1049 aaKnown RBP13.63□□□□□ -0.23
LGR5-203ENST00000540815 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.63□□□□□ -0.23
LGR5-203ENST00000540815 HIP1O00291 1037 aa13.63□□□□□ -0.23
LGR5-203ENST00000540815 RFX5P48382 616 aaPredicted RBP13.63□□□□□ -0.23
LGR5-203ENST00000540815 SIL1Q9H173 461 aa13.63□□□□□ -0.23
LGR5-203ENST00000540815 TOGARAM1Q9Y4F4 1720 aa13.62□□□□□ -0.23
LGR5-203ENST00000540815 KLHL40Q2TBA0 621 aa13.62□□□□□ -0.23
LGR5-203ENST00000540815 TPRNQ4KMQ1 711 aa13.62□□□□□ -0.23
LGR5-203ENST00000540815 MCTP1Q6DN14 999 aa13.62□□□□□ -0.23
LGR5-203ENST00000540815 CAVIN1Q6NZI2 390 aaKnown RBP13.62□□□□□ -0.23
LGR5-203ENST00000540815 CCDC8Q9H0W5 538 aaPredicted RBP13.62□□□□□ -0.23
LGR5-203ENST00000540815 TNS2Q63HR2 1409 aa13.62□□□□□ -0.23
LGR5-203ENST00000540815 ATP5J2-PTCD1G3V325 749 aa13.62□□□□□ -0.23
LGR5-203ENST00000540815 PTCD1O75127 700 aaKnown RBP13.62□□□□□ -0.23
LGR5-203ENST00000540815 CASP7P55210 303 aa13.62□□□□□ -0.23
LGR5-203ENST00000540815 CBX1P83916 185 aa13.62□□□□□ -0.23
LGR5-203ENST00000540815 RBM27Q9P2N5 1060 aaKnown RBP13.62□□□□□ -0.23
LGR5-203ENST00000540815 FOXD4L5Q5VV16 416 aaPredicted RBP13.61□□□□□ -0.23
LGR5-203ENST00000540815 UBE3BQ7Z3V4 1068 aa13.61□□□□□ -0.23
LGR5-203ENST00000540815 FOXD4L4Q8WXT5 416 aaPredicted RBP13.61□□□□□ -0.23
LGR5-203ENST00000540815 TTC14Q96N46 770 aa13.61□□□□□ -0.23
LGR5-203ENST00000540815 STRN4Q9NRL3 753 aa13.61□□□□□ -0.23
LGR5-203ENST00000540815 CCDC173Q0VFZ6 552 aa13.61□□□□□ -0.23
LGR5-203ENST00000540815 KCNB2Q92953 911 aa13.61□□□□□ -0.23
LGR5-203ENST00000540815 LMBRD1Q9NUN5 540 aa13.61□□□□□ -0.23
LGR5-203ENST00000540815 TJP1Q07157 1748 aa13.61□□□□□ -0.23
LGR5-203ENST00000540815 A0A087WZG4 1122 aa13.6□□□□□ -0.23
LGR5-203ENST00000540815 PTPN12Q05209 780 aaKnown RBP13.6□□□□□ -0.23
LGR5-203ENST00000540815 RASEFQ8IZ41 740 aa13.6□□□□□ -0.23
LGR5-203ENST00000540815 RBSNQ9H1K0 784 aa13.6□□□□□ -0.23
LGR5-203ENST00000540815 SNRKQ9NRH2 765 aa13.6□□□□□ -0.23
LGR5-203ENST00000540815 BRD1O95696 1058 aa13.6□□□□□ -0.23
LGR5-203ENST00000540815 MAPK8IP2Q13387 824 aaPredicted RBP13.6□□□□□ -0.23
LGR5-203ENST00000540815 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.6□□□□□ -0.23
LGR5-203ENST00000540815 TTLL7Q6ZT98 887 aa13.6□□□□□ -0.23
LGR5-203ENST00000540815 NOL8Q76FK4 1167 aaKnown RBP13.6□□□□□ -0.23
LGR5-203ENST00000540815 RNF214Q8ND24 703 aa13.6□□□□□ -0.23
LGR5-203ENST00000540815 DDX54Q8TDD1 881 aaKnown RBP13.6□□□□□ -0.23
LGR5-203ENST00000540815 ANP32BQ92688 251 aaKnown RBP13.6□□□□□ -0.23
LGR5-203ENST00000540815 PTH1RQ03431 593 aa13.59□□□□□ -0.23
LGR5-203ENST00000540815 H7C1W4 665 aa13.59□□□□□ -0.23
LGR5-203ENST00000540815 A1BGP04217 495 aa13.59□□□□□ -0.23
LGR5-203ENST00000540815 CCDC171Q6TFL3 1326 aa13.58□□□□□ -0.23
LGR5-203ENST00000540815 PRIM1P49642 420 aaKnown RBP13.58□□□□□ -0.24
LGR5-203ENST00000540815 EVA1CP58658 441 aa13.58□□□□□ -0.24
LGR5-203ENST00000540815 NMIQ13287 307 aaPredicted RBP13.58□□□□□ -0.24
LGR5-203ENST00000540815 TNNI3KQ59H18 835 aa13.58□□□□□ -0.24
LGR5-203ENST00000540815 BBXQ8WY36 941 aaPredicted RBP13.58□□□□□ -0.24
LGR5-203ENST00000540815 PPP1R9BQ96SB3 815 aa13.58□□□□□ -0.24
LGR5-203ENST00000540815 TM6SF1Q9BZW5 370 aa13.58□□□□□ -0.24
LGR5-203ENST00000540815 BOLA2Q9H3K6 86 aa13.58□□□□□ -0.24
LGR5-203ENST00000540815 FPGT-TNNI3KV9GXZ4 949 aa13.58□□□□□ -0.24
LGR5-203ENST00000540815 ATP5JP18859 108 aa13.57□□□□□ -0.24
LGR5-203ENST00000540815 AK2P54819 239 aa13.57□□□□□ -0.24
LGR5-203ENST00000540815 FOXO4P98177 505 aa13.57□□□□□ -0.24
LGR5-203ENST00000540815 TFCP2Q12800 502 aa13.57□□□□□ -0.24
LGR5-203ENST00000540815 ZNF830Q96NB3 372 aaPredicted RBP13.57□□□□□ -0.24
LGR5-203ENST00000540815 CWC25Q9NXE8 425 aaPredicted RBP13.57□□□□□ -0.24
LGR5-203ENST00000540815 NECTIN1Q15223 517 aa13.57□□□□□ -0.24
LGR5-203ENST00000540815 C17orf53Q8N3J3 647 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms